ID: uc001xpi.2_intron_11_0_chr14_74453597_r.3p
GENE: (4)
chr14:74453547-74453796-


(1)
B-CELL
(4)
BREAST
(12)
CELL-LINE
(2)
CERVIX
(5)
HEART
(2)
HELA
(1)
KIDNEY
(4)
LIVER
(2)
OTHER
(31)
SKIN
(1)
TESTES

Sense strand
ATGGTAGCAGAAATGGACCCTCAGAGGTTGCTCTAGTCCTTCTTTCCAGTACTCCTGCAAGACATTCCTCACAACTAGGATCATTTGGGATAACTTCAGGGAAGTCATAGGAAAACTTACAGAGACAGAGCCCAGCATCTGAAGCAGCCTAACTTTTGGTAACCAGCTCTCTCTTCTGTTTTGTTCCATGGACAAAATAGGACAGCTTCCAATTCTAGAAGGGGAAGTTTTTGATTCTGTGAAGCCAGGA
.............................................................................((....((((.....(((((...)))))..((((....))))......)))).))......................................................................................................................
.............................................................................78....................................................132....................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR040009(GSM532894)
G727T. (cervix)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR189785TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..................................................................................ATTTGGGATAACTTCAG.......................................................................................................................................................17322.0022.004.330.33--2.33----------1.331.330.330.330.331.001.00-----1.00--------1.00---1.00-0.670.670.33-0.330.330.330.330.330.330.330.33--0.330.330.330.330.330.33---
.................................................................................CATTTGGGATAACTTCAG.......................................................................................................................................................18121.0021.00-2.00---2.002.002.00-2.00-2.00-----1.00-----1.001.001.001.00--1.00-----1.00---1.00-1.00-----------------------
.......................................................................CAACTAGGATCATTTGGGATAACTTCAG.......................................................................................................................................................2812.002.00-------------2.00---------------------------------------------------
...............................................................................ATCATTTGGGATAACTTCAG.......................................................................................................................................................2012.002.00-2.00---------------------------------------------------------------
.........................................................................................................CATAGGAAAACTTACAGAGACAG..........................................................................................................................2312.002.00--------------2.00--------------------------------------------------
.......................................................................................................................................................................................................................TAGAAGGGGAAGTTTTTGATT..............2112.002.00---2.00-------------------------------------------------------------
....................................................................................TTGGGATAACTTCAGGAAA...................................................................................................................................................192.000.00----------2.00------------------------------------------------------
.......................................................................................................................................................................................................................TAGAAGGGGAAGTTTTTGATC..............211.000.00---1.00-------------------------------------------------------------
........................................................................................................................................................................................................GACAGCTTCCAATTCTAGAAGG............................2211.001.00------------------1.00----------------------------------------------
..................................................................................................................................................................................................AAATAGGACAGCTTCGG.......................................171.000.00----------------------------------1.00------------------------------
..........................................TTTCCAGTACTCCTGCAAGACATTCC......................................................................................................................................................................................2611.001.00-------------------------------------1.00---------------------------
...........................................................................................................................................................................................................................AGGGGAAGTTTTTGATTC.............1811.001.00--------1.00--------------------------------------------------------
...........................................................................................................................................................................................................................AGGGGAAGTTTTTGATTCT............1911.001.00--------1.00--------------------------------------------------------
...........................................................................TAGGATCATTTGGGATAACTTCAGGGAAGT.................................................................................................................................................3011.001.00------------1.00----------------------------------------------------
...................................................................................TTTGGGATAACTTCAG.......................................................................................................................................................1651.001.00-----0.20--------------0.200.20----------------------0.20------------------0.20-
.......................................................................................................................................................................................................................TAGAAGGGGAAGTTTTTGATA..............211.000.00---1.00-------------------------------------------------------------
........................................................................AACTAGGATCATTTGGGATAACTTCAG.......................................................................................................................................................2711.001.00----------------------1.00------------------------------------------
.....................................................................................................................................................................................................TAGGACAGCTTCCAATTCTAGAAGGGG..........................2711.001.00------------1.00----------------------------------------------------
................................................GTACTCCTGCAAGACGG.........................................................................................................................................................................................171.000.00------------------------------1.00----------------------------------
..................................................................................ATTTGGGATAACTTCAGA......................................................................................................................................................1830.3322.00---------------0.33-------------------------------------------------
..................................................................................ATTTGGGATAACTTCAGCGGA...................................................................................................................................................2130.3322.00-------------------------------------------------------0.33---------
.................................................................................................AGGGAAGTCATAGGAAAA.......................................................................................................................................1830.330.33------------------------------------------------------0.33----------
......................................................................................................................................................................................................................................TTGATTCTGTGAAGCC....1640.250.25--------------------------------------------------------------0.25--
.......................................................................................................................................................................TCTCTCTTCTGTTTTGTT.................................................................1890.110.11----------------------------------------------------------------0.11

Antisense strand
ATGGTAGCAGAAATGGACCCTCAGAGGTTGCTCTAGTCCTTCTTTCCAGTACTCCTGCAAGACATTCCTCACAACTAGGATCATTTGGGATAACTTCAGGGAAGTCATAGGAAAACTTACAGAGACAGAGCCCAGCATCTGAAGCAGCCTAACTTTTGGTAACCAGCTCTCTCTTCTGTTTTGTTCCATGGACAAAATAGGACAGCTTCCAATTCTAGAAGGGGAAGTTTTTGATTCTGTGAAGCCAGGA
.............................................................................((....((((.....(((((...)))))..((((....))))......)))).))......................................................................................................................
.............................................................................78....................................................132....................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR040009(GSM532894)
G727T. (cervix)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR189785TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..........................................................................................................................................................................................................................AAGGGGAAGTTTTTGTTG.............. 181.000.00--1.00--------------------------------------------------------------
.................................TAGTCCTTCTTTCCAAAGA...................................................................................................................................................................................................... 191.000.00--------------------------------------1.00--------------------------
.....................................................................................................................................................................................................TAGGACAGCTTCCAATTAG.................................. 191.000.00---------------------------------1.00-------------------------------
..........................................................AAGACATTCCTCACAACCATC........................................................................................................................................................................... 211.000.00--------------------------------1.00--------------------------------
........................................................................................................................................................................................................................AGAAGGGGAAGTTTTTGG................ 181.000.00--1.00--------------------------------------------------------------
..........................................................................................................................................................................................................................AAGGGGAAGTTTTTGTTC.............. 181.000.00--1.00--------------------------------------------------------------
................................................................................................................................................................AACCAGCTCTCTCTTCTTG....................................................................... 191.000.00----------------------------1.00------------------------------------
........................................................................................................................................................................................................................AGAAGGGGAAGTTTTTGC................ 181.000.00--1.00--------------------------------------------------------------
.....................ACTGGAAAGAAGGACTAGAGCAACCTCTG........................................................................................................................................................................................................ 2911.001.00-------------------1.00---------------------------------------------
.............................GCTCTAGTCCTTCTTGA............................................................................................................................................................................................................ 171.000.00-------------------------------1.00---------------------------------
.......................................................................................................................GCTGGGCTCTGTCTCTG.................................................................................................................. 1720.500.50---------------------------------------------0.50-------------------