| (4) B-CELL | (8) CELL-LINE | (1) CERVIX | (1) HELA | (1) LIVER | (2) OTHER | (3) SKIN | (1) XRN.ip |
| GGCTGTCACATGGTAGTGTCAATTTAGAAACAGTTTTCATGAAGAAGGCTTATTACAGGCATGAAATCAGTGATGTGTCACTAGTCTTGATTAACAGCAATAAAATCTGTCATATTGGGGAAATTATAGAGTAGAAAATAGTATGTATAGACAAATCTGTGTATGTTACTCAGTTTTTTAATCATCTCTTTTATTTTTAGGATGAGTAGTATGTCAGCACTCTTTCAGCTATCTATGTGGATCAGGGTAT ......................................................................................................................((((((...((((((((((((((((...(((.(((....))).)))..))))..)))))))).....))))...)))))).................................................... ..............................................................................................................111......................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR330891(SRX091729) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR343334 | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | SRR189784 | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR189787 | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR189782 | SRR037937(GSM510475) 293cand2. (cell line) | SRR040008(GSM532893) G727N. (cervix) | DRR001486(DRX001040) "Hela long cytoplasmic cell fraction, LNA(+)". (hela) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330877(SRX091715) tissue: skin psoriatic involveddisease state:. (skin) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................ATCATCTCTTTTATTTTTTTG................................................. | 21 | 96.00 | 0.00 | 49.00 | 34.00 | 7.00 | 5.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................TCATCTCTTTTATTTTTTTG................................................. | 20 | 9.00 | 0.00 | 3.00 | 5.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................TTTTTTAATCATCTCTTTTATTTTTAG.................................................. | 27 | 1 | 5.00 | 5.00 | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................AGTAGTATGTCAGCACTCT........................... | 19 | 1 | 3.00 | 3.00 | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................ATCATCTCTTTTATTTTTCTG................................................. | 21 | 3.00 | 0.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................ATCATCTCTTTTATTTTTTTT................................................. | 21 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................ATCATCTCTTTTATTTTTTCG................................................. | 21 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................GATGAGTAGTATGTCAGCACTCT........................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGGGGAAATTATAGAGTAGA................................................................................................................... | 20 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................AGTAGTATGTCAGCACTCTT.......................... | 20 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TTACTCAGTTTTTTAATCATCTC.............................................................. | 23 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................TTACTCAGTTTTTTAATCATCTCTTTTATTTTTAGA................................................. | 36 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| .............................................................................................................................................................................TTTTTTAATCATCTCTTTTATTTCTAG.................................................. | 27 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................ATCATCTCTTTTATTTTTTG.................................................. | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................ATGAGTAGTATGTCAGCC............................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ..................................................................................................................................................................................................................................AGCTATCTATGTGGATCAGGACG. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TTTTTTAATCATCTCTTTTATTTTAG................................................... | 26 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................TTAGGATGAGTAGTATGTCAGCAC.............................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TCAGCACTCTTTCAGCTATCTATGTGGACAAG..... | 32 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................CTCTTTCAGCTATCTATGTGGAT........ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................ATCATCTCTTTTATTTTTTT.................................................. | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................ATAGACAAATCTGTGG........................................................................................ | 16 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................GTAGTATGTCAGCACTCTTTCAGC..................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................................................................................................................................CACTCTTTCAGCTATCATG.............. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................TTACTCAGTTTTTTAATCATC................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................ATCTATGTGGATCAGGGTAT | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .....................................................................................................................................................................................................................................TATCTATGTGGATCAGG.... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................................................................................................................................................................................................................AGCTATCTATGTGGATCAGG.... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................TCTATGTGGATCAGGACTT | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................ATCATCTCTTTTATTTTATTG................................................. | 21 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................TAATCATCTCTTTTATTTTTAG.................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................ATCATCTCTTTTATTTTCCTG................................................. | 21 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................GTATGTCAGCACTCTTTCAGCTATC................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................ACTCAGTTTTTTAATCATCTCTTTTATTTTCAG.................................................. | 33 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................CATCTCTTTTATTTTTAG.................................................. | 18 | 5 | 0.20 | 0.20 | - | - | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGCTGTCACATGGTAGTGTCAATTTAGAAACAGTTTTCATGAAGAAGGCTTATTACAGGCATGAAATCAGTGATGTGTCACTAGTCTTGATTAACAGCAATAAAATCTGTCATATTGGGGAAATTATAGAGTAGAAAATAGTATGTATAGACAAATCTGTGTATGTTACTCAGTTTTTTAATCATCTCTTTTATTTTTAGGATGAGTAGTATGTCAGCACTCTTTCAGCTATCTATGTGGATCAGGGTAT ......................................................................................................................((((((...((((((((((((((((...(((.(((....))).)))..))))..)))))))).....))))...)))))).................................................... ..............................................................................................................111......................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR330891(SRX091729) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR343334 | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | SRR189784 | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR189787 | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR189782 | SRR037937(GSM510475) 293cand2. (cell line) | SRR040008(GSM532893) G727N. (cervix) | DRR001486(DRX001040) "Hela long cytoplasmic cell fraction, LNA(+)". (hela) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR330877(SRX091715) tissue: skin psoriatic involveddisease state:. (skin) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................CATCTCTTTTATTTTTCCG................................................. | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .......................................................................................................................................AAATAGTATGTATAGCTT................................................................................................. | 18 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................TTACAGGCATGAAATACCG................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ................................................................................................................................................................................................................................TCAGCTATCTATGTGTGGC....... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |