ID: uc001wyn.2_intron_3_0_chr14_51202336_r.3p
GENE: (2)
chr14:51202286-51202535-


(3)
B-CELL 		(1)
BRAIN 		(7)
BREAST 		(12)
CELL-LINE 		(7)
CERVIX 		(6)
HEART 		(4)
LIVER 		(1)
OTHER 		(10)
SKIN

Sense strand
TGTGTGAGGACAGGTGATTAAAACTAGATTACTTAAATGTAAGCAATACACTGAATTGTATTATTTGTTTGTCACTGAATTAACTTGGCTTTCTTCCAAGAGTTGAGATTTCTGACAAGCACAGATTTGTCAAAATAAAGTAGAACAACTCAAGTGTTTTTGTTTCTGTTTCAAGGGAATATTTTGTTTTTTTTAAACAGGTCAGTCAGATGAATTCCCTTGAACAAGAATTAGAAACAATTCATTTGGA
....................................................................................................................((((((.((.(((((...........)).))).))..))))))......((((((.((((((((.....)))))))).))))))..................................................
....................................................................................................................117................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR189782SRR040035(GSM532920)
G001T. (cervix)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040037(GSM532922)
G243T. (cervix)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR343334SRR040019(GSM532904)
G701T. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR189784TAX577580(Rovira)
total RNA. (breast)		SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR040028(GSM532913)
G026N. (cervix)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		GSM532890(GSM532890)
G576T. (cervix)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR029126(GSM416755)
143B. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)
.........................................................................................................................CAGATTTGTCAAAATTCC...............................................................................................................1897.000.0066.00--15.00---5.004.00------1.00---1.00-1.00-2.00-----------------1.00-1.00-----------
.....................................................................................................................................AATAAAGTAGAACAAGATC..................................................................................................1928.000.00-28.00-----------------------------------------------------
........................................AAGCAATACACTGAACACC...............................................................................................................................................................................................1916.000.00--8.00-3.00----1.00---1.00--1.001.00-------1.00-----------------------------
........................................AAGCAATACACTGAACAC................................................................................................................................................................................................189.000.00--5.00-1.001.00---1.00------------------------------------------1.00--
........................................AAGCAATACACTGAACC.................................................................................................................................................................................................178.000.00-----7.00--------------------------------------1.00----------
........................................AAGCAATACACTGAATGTTT..............................................................................................................................................................................................208.000.00----4.00------------1.00--1.00-----2.00----------------------------
........................................................................................................................ACAGATTTGTCAAAATTCC...............................................................................................................197.000.00-----------1.00---2.00---1.00--2.00-----------1.00--------------------
........................................AAGCAATACACTGAAGATC...............................................................................................................................................................................................197.000.00-7.00-----------------------------------------------------
........................................AAGCAATACACTGAAAATA...............................................................................................................................................................................................196.000.00--4.00------------------------------1.00-----------------1.00---
........................................AAGCAATACACTGAATGT................................................................................................................................................................................................185.000.00--2.00---------------------------1.00-1.00-----------------1.00----
........................................AAGCAATACACTGAATGTT...............................................................................................................................................................................................194.000.00------3.00----------1.00-------------------------------------
..........................................................................................................................AGATTTGTCAAAATACC...............................................................................................................173.000.002.00--1.00---------------------------------------------------
.......................................................................................................................CACAGATTTGTCAAAATTCC...............................................................................................................203.000.00-----------3.00-------------------------------------------
.........................................................................................................................CAGATTTGTCAAAATTTC...............................................................................................................183.000.003.00------------------------------------------------------
........................................AAGCAATACACTGAATG.................................................................................................................................................................................................173.000.00----------------1.00------------------------------1.00-----1.00-
.........................................AGCAATACACTGAATGTT...............................................................................................................................................................................................183.000.00------3.00------------------------------------------------
........................................AAGCAATACACTGAACAA................................................................................................................................................................................................183.000.00----3.00--------------------------------------------------
..................................................................................................................................................................................ATATTTTGTTTTTTTTGTTG....................................................202.000.00------------2.00------------------------------------------
.........................................................................................................................CAGATTTGTCAAAATTCCC..............................................................................................................192.000.001.00--------------------1.00---------------------------------
........................................AAGCAATACACTGAAGATA...............................................................................................................................................................................................192.000.00---------1.00------------------------------------1.00--------
........................................AAGCAATACACTGAACCAC...............................................................................................................................................................................................192.000.00-------------------------------------1.00--1.00--------------
........................................AAGCAATACACTGAATATA...............................................................................................................................................................................................191.000.00------------------------1.00------------------------------
........................................AAGCAATACACTGAACCC................................................................................................................................................................................................181.000.00--------------1.00----------------------------------------
........................................................................................................................................................AGTGTTTTTGTTTCTGTTTTGC............................................................................221.000.00------------------------------------------1.00------------
........................................AAGCAATACACTGAAACA................................................................................................................................................................................................181.000.00--------------1.00----------------------------------------
.....................................................................................................................................AATAAAGTAGAACAAGAAA..................................................................................................191.000.00-----------------------------------1.00-------------------
........................................AAGCAATACACTGAAAACA...............................................................................................................................................................................................191.000.00--1.00----------------------------------------------------
...................AAAACTAGATTACTTACAAG...................................................................................................................................................................................................................201.000.00------------------1.00------------------------------------
...............................................................TTTGTTTGTCACTGAAGTAA.......................................................................................................................................................................201.000.00---------------------------1.00---------------------------
............................................................................................................................................................................................................GTCAGATGAATTCCCTTGAACAAGAATT..................2811.001.00-------------------------1.00-----------------------------
............................................................................................................................................................................................................................TGAACAAGAATTAGAAACAATTC.......2311.001.00--------------------------------------1.00----------------
.....................................................................................................................................................................................TTTTGTTTTTTTTAAACACG.................................................201.000.00----------1.00--------------------------------------------
............................................................................................................................................................................................................................TGAACAAGAATTAGAAAC............1811.001.00---------1.00---------------------------------------------
........................................AAGCAATACACTGAAAATT...............................................................................................................................................................................................191.000.00--1.00----------------------------------------------------
.....................................................................................................................................................................................TTTTGTTTTTTTTAAACACTTG...............................................221.000.00----------1.00--------------------------------------------
.........................................................................................................................................................................................................TCAGTCAGATGAATTCCCTTGA...........................2211.001.00-------------------------------1.00-----------------------
........................................AAGCAATACACTGAACATA...............................................................................................................................................................................................191.000.00--1.00----------------------------------------------------
...............................................................................................................................................................................................................AGATGAATTCCCTTGAACAAG......................2111.001.00-------------1.00-----------------------------------------
.....................................................................................................................................................................................TTTTGTTTTTTTTAAACATGT................................................211.000.00----------1.00--------------------------------------------
.........................................................................................................................CAGATTTGTCAAAATTC................................................................................................................171.000.001.00------------------------------------------------------
................................................................................................................................................................................................................................CAAGAATTAGAAACACTGA.......191.000.00--------------------1.00----------------------------------
........................................AAGCAATACACTGAACCA................................................................................................................................................................................................181.000.00----------------------------1.00--------------------------
........................................AAGCAATACACTGAACACA...............................................................................................................................................................................................191.000.00----------------1.00--------------------------------------
.......................................TAAGCAATACACTGACC..................................................................................................................................................................................................171.000.00-----------------------------1.00-------------------------
..................................................................................................................................................................................ATATTTTGTTTTTTTTGTGG....................................................201.000.00------------1.00------------------------------------------
............................................................................................................TTTCTGACAAGCACATAGG...........................................................................................................................191.000.00------------------1.00------------------------------------
...........................................................................................................................................................................................................................TTGAACAAGAATTAGAAACA...........2011.001.00-------------1.00-----------------------------------------
........................................AAGCAATACACTGAATATGT..............................................................................................................................................................................................201.000.00-----1.00-------------------------------------------------
............................................................................................................................................................................................................GTCAGATGAATTCCCTTGAACAAGAA....................2611.001.00------------------------------------------------1.00------
........................................AAGCAATACACTGAATAAA...............................................................................................................................................................................................191.000.00--------------1.00----------------------------------------
.........................................AGCAATACACTGAATGTTT..............................................................................................................................................................................................191.000.00---------------------------------------------1.00---------
........................................AAGCAATACACTGAAGG.................................................................................................................................................................................................171.000.00-------------------------------------------------1.00-----
.....................................................................................................GTTGAGATTTCTGACAAGCA.................................................................................................................................2011.001.00------------------------------------1.00------------------
....................................................................................................................................................................................ATTTTGTTTTTTTTAAAC....................................................1840.250.25------------------------------------------------------0.25

Antisense strand
TGTGTGAGGACAGGTGATTAAAACTAGATTACTTAAATGTAAGCAATACACTGAATTGTATTATTTGTTTGTCACTGAATTAACTTGGCTTTCTTCCAAGAGTTGAGATTTCTGACAAGCACAGATTTGTCAAAATAAAGTAGAACAACTCAAGTGTTTTTGTTTCTGTTTCAAGGGAATATTTTGTTTTTTTTAAACAGGTCAGTCAGATGAATTCCCTTGAACAAGAATTAGAAACAATTCATTTGGA
....................................................................................................................((((((.((.(((((...........)).))).))..))))))......((((((.((((((((.....)))))))).))))))..................................................
....................................................................................................................117................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR189782SRR040035(GSM532920)
G001T. (cervix)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040037(GSM532922)
G243T. (cervix)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR343334SRR040019(GSM532904)
G701T. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR189784TAX577580(Rovira)
total RNA. (breast)		SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR040028(GSM532913)
G026N. (cervix)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		GSM532890(GSM532890)
G576T. (cervix)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR029126(GSM416755)
143B. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)
...................................................................................................................................AAAATAAAGTAGAACAAATC................................................................................................... 201.000.00----------1.00--------------------------------------------
.......................CTAGATTACTTAAATAT.................................................................................................................................................................................................................. 171.000.00------------1.00------------------------------------------
........................................................................................................................................................................................TGTTTTTTTTAAACAGGGG............................................... 191.000.00------------------------1.00------------------------------
.........................................................................................................................................................................TTCAAGGGAATATTTCTTG.............................................................. 191.000.00---------------------------------------1.00---------------