ID: uc001wse.1_intron_7_0_chr14_35066852_r.5p
GENE: SNX6(5)
chr14:35072354-35072603-


(4)
AGO2.ip 		(2)
B-CELL 		(3)
BRAIN 		(2)
BREAST 		(23)
CELL-LINE 		(3)
CERVIX 		(3)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(8)
SKIN 		(1)
TESTES

Sense strand
TTTTGAGAAGAGATTTAAATTTCCATGTCTTCTTGGAATATAATCAAGATGTGAGTATCACATTGATTGGTGGTCAAGTTTTCTTTTTCTTCTTCTTCTTCTTTTTTTTTTTGAGACGGAATCTCGCTCTGTCTTCCAGGCTGGAGTACAGTGGCATAGTGGCATGATCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGGACTACAGGCGCC
................................................................................................................((((((((.......))))))))((((((.(((((.(((((((..((.........))..)).)))))...)))))))))...)).....................................................
.........................................................................74............................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR015447(SRR015447)
nuclear small RNAs. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR040037(GSM532922)
G243T. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR038854(GSM458537)
MM653. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
......................................................................................TTCTTCTTCTTCTTCTTTTTTTTCAG..........................................................................................................................................2618.000.00--6.003.006.003.00--------------------------------------------
....................................................................................TTTTCTTCTTCTTCTTCTTTTTTTTTTTG.........................................................................................................................................2977.007.000.14-0.293.572.570.290.14-------------------------------------------
..................................................................................CTTTTTCTTCTTCTTCTTCTTTTTTTTTG...........................................................................................................................................297.000.00---4.001.002.00--------------------------------------------
..........................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTGGGT......................................................265.000.005.00-------------------------------------------------
......................................................................................TTCTTCTTCTTCTTCTTTTTTTTTTCTTG.......................................................................................................................................295.000.00--1.001.001.002.00--------------------------------------------
....................................................................................TTTTCTTCTTCTTCTTCTTTTTTTTTCTG.........................................................................................................................................294.000.00-2.001.00--1.00--------------------------------------------
..................................................................................CTTTTTCTTCTTCTTCTTCTTTTTTTTTTTG.........................................................................................................................................3123.003.00---1.001.500.50--------------------------------------------
..................................................................................CTTTTTCTTCTTCTTCTTCTTTTTTTTTTG..........................................................................................................................................303.000.00--1.00-2.00---------------------------------------------
.....................................................................................TTTCTTCTTCTTCTTCTTTTTTTTTTCTTG.......................................................................................................................................303.000.00--1.001.00-1.00--------------------------------------------
..............................................................................TTTTCTTTTTCTTCTTCTTATAG.....................................................................................................................................................233.000.003.00-------------------------------------------------
..........................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTGGG.......................................................253.000.003.00-------------------------------------------------
.....................................................................................TTTCTTCTTCTTCTTCTTTTTTTTTCTG.........................................................................................................................................282.000.00----1.001.00--------------------------------------------
..........................................................................................................................................................................................................TGCCATTCTCCTGCCTCAGCCCCG........................242.000.001.00-----1.00-------------------------------------------
...............................................................................................................................................GAGTACAGTGGCATAGTGGCATG....................................................................................2312.002.00----------------2.00---------------------------------
...............................................................................TTTCTTTTTCTTCTTCTTCTTCTTTTTGT..............................................................................................................................................292.000.002.00-------------------------------------------------
.......................................................................................................................................................................TCTTGGCTCACTGCAAGCTCCGCCTCGGGT.....................................................302.000.00-2.00------------------------------------------------
.......................................................................................................................................................................TCTTGGCTCACTGCAAGCTCCGCCTGGG.......................................................282.000.001.001.00------------------------------------------------
................................................................................TTCTTTTTCTTCTTCTTCTTCTTTTTTTTTG...........................................................................................................................................312.000.00--1.00-1.00---------------------------------------------
....................................................................................TTTTCTTCTTCTTCTTCTTTTTTTCG............................................................................................................................................262.000.00------2.00-------------------------------------------
.........................................................................................................................................................................................................ATGCCATTCTCCTGCCTCAGCCCCGG.......................262.000.002.00-------------------------------------------------
....................................................................................TTTTCTTCTTCTTCTTCTTTTTTTCAG...........................................................................................................................................272.000.00--1.00--1.00--------------------------------------------
.........................................................................................................................................................................................................ATGCCATTCTCCTGCCTCAGCCGGG........................252.000.00-2.00------------------------------------------------
............................................................................................TTCTTCTTCTTTTTTTTTGGAC........................................................................................................................................222.000.002.00-------------------------------------------------
.......................................................................................TCTTCTTCTTCTTCTTTTTTTTTTCTAG.......................................................................................................................................282.000.00--1.00-1.00---------------------------------------------
...............................................................................TTTCTTTTTCTTCTTCTTCTTCTTTTTTG..............................................................................................................................................292.000.00---2.00----------------------------------------------
.................................................................................TCTTTTTCTTCTTCTTCTTCTTTTTTTTTG...........................................................................................................................................302.000.00---2.00----------------------------------------------
...................................................................................TTTTTCTTCTTCTTCTTCTTTTTTTAG............................................................................................................................................272.000.00-----2.00--------------------------------------------
..........................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTCCCGGCTC..................................................302.000.00-2.00------------------------------------------------
..................................................................................CTTTTTCTTCTTCTTCTTCTTTTTTG..............................................................................................................................................262.000.00--2.00-----------------------------------------------
.................................................................................TCTTTTTCTTCTTCTTCTTCTTTTTTTTTTTG.........................................................................................................................................3221.501.50--0.500.500.50---------------------------------------------
...................................................................................TTTTTCTTCTTCTTCTTCTTTTTTTTTTTG.........................................................................................................................................3021.501.50---1.000.50---------------------------------------------
................................................................................................................................................................................ACTGCAAGCTCCGCCTCCCGGGCCCT................................................261.000.001.00-------------------------------------------------
....................................................................................TTTTCTTCTTCTTCTTCTTTTTTATG............................................................................................................................................261.000.00-----1.00--------------------------------------------
......................................................................................TTCTTCTTCTTCTTCTTTTTTTTTTCAAG.......................................................................................................................................291.000.00--1.00-----------------------------------------------
....................................................................................TTTTCTTCTTCTTCTTCTTTTTTTTTGAG.........................................................................................................................................291.000.001.00-------------------------------------------------
..........................................................................................TCTTCTTCTTCTTTTTTTTTTTGGACG.....................................................................................................................................271.000.001.00-------------------------------------------------
...................................................................................................................................TCTTCCAGGCTGGAGTACAGTGGCCC.............................................................................................261.000.001.00-------------------------------------------------
....................................................................................TTTTCTTCTTCTTCTTCTTTTTTTTTCTTG........................................................................................................................................301.000.00--1.00-----------------------------------------------
.......................................................................................TCTTCTTCTTCTTCTTTTTTTTTGGCT........................................................................................................................................271.000.00-1.00------------------------------------------------
......................................................................................................................................................................ATCTTGGCTCACTGCAAGCTCCGCGTTC........................................................281.000.001.00-------------------------------------------------
...............................................................................................TTCTTCTTTTTTTTTTTGTTGG.....................................................................................................................................221.000.00---1.00----------------------------------------------
.......................................................................................................................................................................TCTTGGCTCACTGCAAGCTCCGCCTCCCCGGA...................................................321.000.001.00-------------------------------------------------
......................................................................................................................................................................ATCTTGGCTCACTGCAAGCTCCGCCTCGGGG.....................................................311.000.001.00-------------------------------------------------
..........................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTCCAGCT....................................................281.000.00-1.00------------------------------------------------
..........AGATTTAAATTTCCATGTCTTCTTG.......................................................................................................................................................................................................................2511.001.00-----------------------------------1.00--------------
.......................................................................................................................................................................................................................................AGCTGGGACTACAGGCGCCGGCC231.000.00-----------1.00--------------------------------------
..........................................................................................................................................................................................................TGCCATTCTCCTGCCTCAGCCCCAG.......................251.000.001.00-------------------------------------------------
.................................................................................................................................................................................CTGCAAGCTCCGCCTCCCGGGTTATT...............................................261.000.00------------------1.00-------------------------------
...............................................................................................TTCTTCTTTTTTTTTTTGTGC......................................................................................................................................211.000.00------1.00-------------------------------------------
..............................................................................TTTTCTTTTTCTTCTTCTTCTTCTTTTTAAG.............................................................................................................................................311.000.00-----1.00--------------------------------------------
..........................................................................................TCTTCTTCTTCTTTTTTTTTTTGGCTT.....................................................................................................................................271.000.00-1.00------------------------------------------------
.............................................................................................................TTTGAGACGGAATCTCGCCATG.......................................................................................................................221.000.00---------1.00----------------------------------------
....................................................................................TTTTCTTCTTCTTCTTCTTTTTTTTTGG..........................................................................................................................................281.000.00---1.00----------------------------------------------
.......................................................................................................................................................................TCTTGGCTCACTGCAAGCTCCGCCTCCGGGC....................................................311.000.001.00-------------------------------------------------
...............................................................................TTTCTTTTTCTTCTTCTTCTTCTTTTTTC..............................................................................................................................................291.000.001.00-------------------------------------------------
..................................................................................................TTCTTTTTTTTTTTGAGACGGAATCA..............................................................................................................................261.000.00-1.00------------------------------------------------
........................................................................................CTTCTTCTTCTTCTTTTTTTTCCAG.........................................................................................................................................251.000.00----1.00---------------------------------------------
...............................................................................................................................................................................................................TTCTCCTGCCTCAGCCTCCCTAACT..................251.000.001.00-------------------------------------------------
...................................................................................TTTTTCTTCTTCTTCTTCTTTTTTTTCTG..........................................................................................................................................291.000.00--1.00-----------------------------------------------
......................................................................................TTCTTCTTCTTCTTCTTTTTTCTTG...........................................................................................................................................251.000.00-----1.00--------------------------------------------
....................................................................................TTTTCTTCTTCTTCTTCTTTTTTTTCTTG.........................................................................................................................................291.000.00--1.00-----------------------------------------------
..................................................................................CTTTTTCTTCTTCTTCTTCTTTTCTTG.............................................................................................................................................271.000.00--1.00-----------------------------------------------
..................................................................................................TTCTTTTTTTTTTTGATCT.....................................................................................................................................191.000.00---1.00----------------------------------------------
.........................................................................................TTCTTCTTCTTCTTTTTTTTTTCGGC.......................................................................................................................................261.000.001.00-------------------------------------------------
......................................................................................TTCTTCTTCTTCTTCTTTTTTTTTCG..........................................................................................................................................261.000.00--1.00-----------------------------------------------
................................................................................................................................................................GGCATGATCTTGGCTCACTGGGT...................................................................231.000.00--------------------------------------------1.00-----
.....................................................................................TTTCTTCTTCTTCTTCTTTTTTTTTCTTG........................................................................................................................................291.000.00----1.00---------------------------------------------
...................................................................................TTTTTCTTCTTCTTCTTCTTTTTTTCAT...........................................................................................................................................281.000.00-----1.00--------------------------------------------
.........................................................................................................................................................................................................................................CTGGGACTACAGGCGCCGG191.000.00----------1.00---------------------------------------
......................................................................................................................................TCCAGGCTGGAGTACAGTGCGC..............................................................................................221.000.001.00-------------------------------------------------
....................................................................................TTTTCTTCTTCTTCTTCTTTCTCC..............................................................................................................................................241.000.001.00-------------------------------------------------
......................................................................................TTCTTCTTCTTCTTCTTTTTTTTTCTAG........................................................................................................................................281.000.00--1.00-----------------------------------------------
....................................................................................TTTTCTTCTTCTTCTTCTTTTTTTTCAA..........................................................................................................................................281.000.00----1.00---------------------------------------------
......................................................................................TTCTTCTTCTTCTTCTTTTTTTTCAT..........................................................................................................................................261.000.00---1.00----------------------------------------------
.............................................................................................TCTTCTTCTTTTTTTTTTTGGGGT.....................................................................................................................................241.000.001.00-------------------------------------------------
.......................................................................................TCTTCTTCTTCTTCTTTTTTTTTTCCCG.......................................................................................................................................281.000.001.00-------------------------------------------------
....................................................................................................................CGGAATCTCGCTCTG.......................................................................................................................1501.001.00--------1.00-----------------------------------------
..............................................................................................................................................................................................CTCCCGGGTTCATGCCATTCTT......................................221.000.00-------------------------------------------1.00------
..........................................................................................................................................................................................................TGCCATTCTCCTGCCTCAGAAGC.........................231.000.00----------------------------------------------1.00---
................................................................................................................................................................................ACTGCAAGCTCCGCCTCCGG......................................................201.000.00---------------1.00----------------------------------
..........................................................................................TCTTCTTCTTCTTTTTTTTTGGCC........................................................................................................................................241.000.001.00-------------------------------------------------
..............................................................................................................................................................................................................ATTCTCCTGCCTCAGCCTCCCTAGTAGCCCAG............321.000.00-1.00------------------------------------------------
............................................................................................TTCTTCTTCTTTTTTTTTTTGAGGCG....................................................................................................................................261.000.001.00-------------------------------------------------
..........................................................................................................................................................................................CCGCCTCCCGGGTTCATCAT............................................201.000.00-----------------------------------------1.00--------
......................................................................................................................................................................................................................GCCTCAGCCTCCCTAGTAGCTCTG............241.000.00------------------------------------------------1.00-
.............................................................................................................TTTGAGACGGAATCTCGCTCCTGT.....................................................................................................................241.000.00---------1.00----------------------------------------
.....................................................................................TTTCTTCTTCTTCTTCTTTTTTTTTTCTAG.......................................................................................................................................301.000.00-----1.00--------------------------------------------
..........................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTCCGGGC....................................................281.000.001.00-------------------------------------------------
......................................................................................................................................................................ATCTTGGCTCACTGCAAGCTCCGCCTTGG.......................................................291.000.001.00-------------------------------------------------
......................................................................................................................................................................................................TTCATGCCATTCTCCTGCCTCAATTT..........................261.000.00------------1.00-------------------------------------
.........................................................................................TTCTTCTTCTTCTTTTTTTTTTTGGCT......................................................................................................................................271.000.00-1.00------------------------------------------------
......................................................................................TTCTTCTTCTTCTTCTTTTTTCATT...........................................................................................................................................251.000.00---1.00----------------------------------------------
....................................................................................TTTTCTTCTTCTTCTTCTTTTTTTTCAG..........................................................................................................................................281.000.00----1.00---------------------------------------------
......................................................................................................................................................................................................TTCATGCCATTCTCCTGCCTAAAA............................241.000.00----------------------1.00---------------------------
..............................................................................................................TTGAGACGGAATCTCGCTCTG.......................................................................................................................2101.001.00----------1.00---------------------------------------
............................................................................................TTCTTCTTCTTTTTTTTTTTGAGAAGG...................................................................................................................................271.000.001.00-------------------------------------------------
.........................................................................................................................................................................TTGGCTCACTGCAAGCTCCGCCTCCCGGCTC..................................................311.000.001.00-------------------------------------------------
..........................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTAGGT......................................................261.000.001.00-------------------------------------------------
.....................................................................................TTTCTTCTTCTTCTTCTTTTTTTCTCG..........................................................................................................................................271.000.00-----1.00--------------------------------------------
.......................................................................................TCTTCTTCTTCTTCTTTTTTCG.............................................................................................................................................221.000.00--1.00-----------------------------------------------
......................................................................................................................................................................ATCTTGGCTCACTGCAAGCCGCC.............................................................231.000.001.00-------------------------------------------------
.........................................................................................................................TCTCGCTCTGTCTTCCAGGCTGGAGA.......................................................................................................261.000.00---------------------1.00----------------------------
................................................................................................................................................................................ACTGCAAGCTCCGCCTCCCGGGGCCA................................................261.000.00-1.00------------------------------------------------
.............................................................................................TCTTCTTCTTTTTTTTTTTGGGG......................................................................................................................................231.000.001.00-------------------------------------------------
...............................................................................TTTCTTTTTCTTCTTCTTCTTCTTTTTAG..............................................................................................................................................291.000.00--1.00-----------------------------------------------
.......................................................................................TCTTCTTCTTCTTCTTTTTTTTTTCTTA.......................................................................................................................................281.000.00-1.00------------------------------------------------
...........................................................................................................................................................................................................................AGCCTCCCTAGTAGCTGGGACTACAGGCGCGG321.000.001.00-------------------------------------------------
...................................................................................TTTTTCTTCTTCTTCTTCTTTTTTCG.............................................................................................................................................261.000.00--1.00-----------------------------------------------
...........................................................................................CTTCTTCTTCTTTTTTTTTTCAAT.......................................................................................................................................241.000.00--1.00-----------------------------------------------
...............................................................................................TTCTTCTTTTTTTTTTTGAGACGGAGGC...............................................................................................................................281.000.001.00-------------------------------------------------
.............................................................................................TCTTCTTCTTTTTTTTTTTGGAGC.....................................................................................................................................241.000.001.00-------------------------------------------------
...................................................................................TTTTTCTTCTTCTTCTTCTTTTTTCCTG...........................................................................................................................................281.000.00--1.00-----------------------------------------------
......................................................................................................................................................................................AGCTCCGCCTCCCGGGTCACC...............................................211.000.001.00-------------------------------------------------
.......................................................................................................................................................................................................................................AGCTGGGACTACAGGCGCCGCAG231.000.001.00-------------------------------------------------
......................................................................................................................................................................ATCTTGGCTCACTGCAAGCTCCGCCGGGG.......................................................291.000.001.00-------------------------------------------------
......................................................................................TTCTTCTTCTTCTTCTTTTTTTTCATT.........................................................................................................................................271.000.00---1.00----------------------------------------------
....................................................................................TTTTCTTCTTCTTCTTCTTTTTTAG.............................................................................................................................................251.000.00--1.00-----------------------------------------------
..........................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTCCCGGTCC..................................................301.000.00-1.00------------------------------------------------
........................................................................................CTTCTTCTTCTTCTTTTTTTTCAG..........................................................................................................................................241.000.00-----1.00--------------------------------------------
.....................................................................................TTTCTTCTTCTTCTTCTTTTTCG..............................................................................................................................................231.000.00--1.00-----------------------------------------------
.................................................................................................................................................................GCATGATCTTGGCTCACTC......................................................................191.000.00---------------------------------------1.00----------
...........................................................................................................TTTTTGAGACGGAATCTCGCTCCCG......................................................................................................................251.000.001.00-------------------------------------------------
...................................................................................TTTTTCTTCTTCTTCTTCTTTTCTTG.............................................................................................................................................261.000.00-----1.00--------------------------------------------
................................................................................................................................................................................ACTGCAAGCTCCGCCTCCCGGGGCC.................................................251.000.001.00-------------------------------------------------
......................................................................................................................................................................ATCTTGGCTCACTGCAAGCTCCGCCTCGG.......................................................291.000.001.00-------------------------------------------------
......................................................................................................................................................................ATCTTGGCTCACTGCAAGCTCCGCCTTCGA......................................................301.000.001.00-------------------------------------------------
..................................................................................................................GACGGAATCTCGCTCTG.......................................................................................................................1701.001.00-----------1.00--------------------------------------
.....................................................................................................TTTTTTTTTTTGAGACGGAAAGC..............................................................................................................................231.000.00-1.00------------------------------------------------
............................................................................................TTCTTCTTCTTTTTTTTTTTGGTAG.....................................................................................................................................251.000.001.00-------------------------------------------------
.....................................................................................TTTCTTCTTCTTCTTCTTTTTTCTG............................................................................................................................................251.000.00----1.00---------------------------------------------
.............................................................................................................................................................AGTGGCATGATCTTGGCGCAG........................................................................211.000.00-1.00------------------------------------------------
.............................................................................................................TTTGAGACGGAATCTCGCTCTG.......................................................................................................................2201.001.00------------------------------------1.00-------------
...............................................................................................TTCTTCTTTTTTTTTTTGTTAT.....................................................................................................................................221.000.00----1.00---------------------------------------------
..........................................................................................TCTTCTTCTTCTTTTTTTTTTCTAG.......................................................................................................................................251.000.001.00-------------------------------------------------
......................................................................................TTCTTCTTCTTCTTCTTTTTTCAAG...........................................................................................................................................251.000.00---1.00----------------------------------------------
...................................................................................TTTTTCTTCTTCTTCTTCTTTCTTG..............................................................................................................................................251.000.00-----1.00--------------------------------------------
....................................................................................TTTTCTTCTTCTTCTTCTTTTTTTTCTG..........................................................................................................................................281.000.00-----1.00--------------------------------------------
.................................................................................................CTTCTTTTTTTTTTTGAGACGGAGCT...............................................................................................................................261.000.001.00-------------------------------------------------
..............................................................................................................................................................................TCACTGCAAGCTCCGCCTCCCGGGGGC.................................................271.000.001.00-------------------------------------------------
.................................................................................TCTTTTTCTTCTTCTTCTTCTTTTTTTTTTG..........................................................................................................................................311.000.00---1.00----------------------------------------------
..........................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTCCCGGGTCG.................................................311.000.001.00-------------------------------------------------
.....................................................................................TTTCTTCTTCTTCTTCTTTTTTTTTTTGAG.......................................................................................................................................3060.170.170.17-------------------------------------------------

Antisense strand
TTTTGAGAAGAGATTTAAATTTCCATGTCTTCTTGGAATATAATCAAGATGTGAGTATCACATTGATTGGTGGTCAAGTTTTCTTTTTCTTCTTCTTCTTCTTTTTTTTTTTGAGACGGAATCTCGCTCTGTCTTCCAGGCTGGAGTACAGTGGCATAGTGGCATGATCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGGACTACAGGCGCC
................................................................................................................((((((((.......))))))))((((((.(((((.(((((((..((.........))..)).)))))...)))))))))...)).....................................................
.........................................................................74............................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR015447(SRR015447)
nuclear small RNAs. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR040037(GSM532922)
G243T. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR038854(GSM458537)
MM653. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................................................TTCTTTTTCTTCTTCTTCTCACG................................................................................................................................................... 233.000.00-------------3.00------------------------------------
...............................................................................................................................................................................................................TTCTCCTGCCTCAGCCTCCCTCCGG.................. 252.000.001.001.00------------------------------------------------
.......................................................................................................................................................................................GCTCCGCCTCCCGGGTTCATGCCACTGT....................................... 282.000.00-2.00------------------------------------------------
...............................................................................................................................................................................................................TTCTCCTGCCTCAGCCTCCCTAGTCCGG............... 282.000.002.00-------------------------------------------------
..........................................................................................................................................GGCTGGAGTACAGTGGCAGAGC.......................................................................................... 222.000.00-2.00------------------------------------------------
............................................................................................................................................................................................................CCATTCTCCTGCCTCAGCCTCCCTGGCG.................. 282.000.001.001.00------------------------------------------------
...............................................................................................................................................................................CACTGCAAGCTCCGCCTCCCGGGTTCTCT.............................................. 292.000.00---------2.00----------------------------------------
..................................................................................................................................................................................TGCAAGCTCCGCCTCCCGGGTTTAA............................................... 252.000.00------------2.00-------------------------------------
...............................................................................................................................................................................................................TTCTCCTGCCTCAGCCTCCCTCCTC.................. 252.000.00-2.00------------------------------------------------
...........................................................................................................................................................................GGCTCACTGCAAGCTCCGCCTCTTT...................................................... 251.000.00-------------------1.00------------------------------
..................................................................................................................................................................................................................TCCTGCCTCAGCCTCCCTAGTTAT................ 241.000.00--------------1.00-----------------------------------
................................................................................................................................................................GGCATGATCTTGGCTCACTGCAACGC................................................................ 261.000.001.00-------------------------------------------------
..................................................................................................................................................................................................................TCCTGCCTCAGCCTCCCTCCAC.................. 221.000.001.00-------------------------------------------------
................................................................................................................................................................................................................TCTCCTGCCTCAGCCTCCCTCCAC.................. 241.000.001.00-------------------------------------------------
.....................................................................................................................................................................................................................TGCCTCAGCCTCCCTAGTAGCTGGTGGT......... 281.000.00-------1.00------------------------------------------
...............................................................................................................................................................................CACTGCAAGCTCCGCCTCCCGGGTTCTT............................................... 281.000.001.00-------------------------------------------------
..........................................................................................TCTTCTTCTTCTTTTTTTTCTAT......................................................................................................................................... 231.000.00-------------------------1.00------------------------
......................................................................................................................................................................................AGCTCCGCCTCCCGGGCGA................................................. 191.000.00----------------------------1.00---------------------
................................................................................................................................................................................................................TCTCCTGCCTCAGCCTCCCTTCCG.................. 241.000.00-1.00------------------------------------------------
.........................................................................................................................................................................................TCCGCCTCCCGGGTTCATGCCATTCTTCTC................................... 301.000.00------1.00-------------------------------------------
........................................................................................................................................................................................................CATGCCATTCTCCTGCCTCAGCCTTT........................ 261.000.00------------------------------1.00-------------------
...............................................................................................................................................................CTTGCAGTGAGCCAAGATCATGCCA.................................................................. 2501.001.00--------------------------------1.00-----------------
...........................................................................................................................................................................................CGCCTCCCGGGTTCATGTCGT.......................................... 211.000.00--------------1.00-----------------------------------
........................................................................................................................................................................................CTCCGCCTCCCGGGTTCATGCCATGTC....................................... 271.000.00-1.00------------------------------------------------
..............................................................................................................................................................................TCACTGCAAGCTCCGCCTCCCGGGTTTT................................................ 281.000.00-------------------------------1.00------------------
.........................................................................................................................................................................................TCCGCCTCCCGGGTTCATGCCATCC........................................ 251.000.00-1.00------------------------------------------------
..........................................................................................................................................................................TGAACCCGGGAGGCGGAGCTTGCAGTGAGCCA................................................ 3201.001.00--------1.00-----------------------------------------
.......................................................................................................................................................................................GCTCCGCCTCCCGGGTTCATGCCAGCAG....................................... 281.000.001.00-------------------------------------------------
..................................................................................................................................................................................TGCAAGCTCCGCCTCCCGGGTTT................................................. 231.000.00---------------1.00----------------------------------
.................................................................................................................................................................................................................CTCCTGCCTCAGCCTCCCTAGTAGCTGGGTGGG........ 331.000.00-------1.00------------------------------------------
...................................................................................................................................................................................................................CCTGCCTCAGCCTCCCTCGCA.................. 211.000.00-----------------------------1.00--------------------
......................................................................................................................................................................................................TTCATGCCATTCTCCTGGAA................................ 201.000.00---------------------------1.00----------------------
.........................................................................................................................................................................................TCCGCCTCCCGGGTTCATGCCAT.......................................... 231.000.00------------------------1.00-------------------------
................................................................................................................................................................................ACTGCAAGCTCCGCCTCCCGGGTTTCT............................................... 271.000.00----------------------------------------1.00---------
......................................................................................................................................TCCAGGCTGGAGTACAGTGGCATAG........................................................................................... 251.000.001.00-------------------------------------------------
.......................................................................................................................................................................................................................CCTCAGCCTCCCTAGATGC................ 191.000.00--------------------------1.00-----------------------
...........................................................................................................................................................................................................GCCATTCTCCTGCCTCAGCCTCCCTCCG................... 281.000.001.00-------------------------------------------------
.........................................................................................................................................................................................TCCGCCTCCCGGGTTCATGCCATTCTCAC.................................... 291.000.00-----------1.00--------------------------------------
..........................................................................................................................................................................................................................CAGCCTCCCTAGTAGCTTTGT........... 211.000.00-1.00------------------------------------------------
.......................................................................................................................................................................................GCTCCGCCTCCCGGGTTCATGCCATTCTCCGC................................... 321.000.00-1.00------------------------------------------------
...................................................................................................................................................................................GCAAGCTCCGCCTCCCGGGTTCATGCG............................................ 271.000.001.00-------------------------------------------------
..............................................................................................................................................................................................................ATTCTCCTGCCTCAGCCTCCCTAGTAGCAGC............. 311.000.00--------1.00-----------------------------------------
.........................................................................................................................................................................................TCCGCCTCCCGGGTTCATGCCATTTCTC..................................... 281.000.00-1.00------------------------------------------------
......................................................................................................................................................................................................TTCATGCCATTCTCCTGCCTCAGA............................ 241.000.00----------------------------------1.00---------------
......................................................................................................................................................................................AGCTCCGCCTCCCGGGTTCAAA.............................................. 221.000.00--------------------------------------1.00-----------
......................................................................................................................................................................................................................GCCTCAGCCTCCCTAGTAGCTGGGACTGGGT..... 311.000.00-1.00------------------------------------------------
.............................................................................................................................................................................................CCTCCCGGGTTCATGCCAGGCT....................................... 221.000.001.00-------------------------------------------------
..................................................................................................................................................................................................................TCCTGCCTCAGCCTCCCTCTA................... 211.000.00-------------------------------------1.00------------
.................................................................................................................................................................................CTGCAAGCTCCGCCTCCCGGGAGG................................................. 241.000.00-----------------------1.00--------------------------
.........................................................................................................................................................................................TCCGCCTCCCGGGTTCATGCCATTCTC...................................... 271.000.001.00-------------------------------------------------
..........................................................................................................................................................................................CCGCCTCCCGGGTTCATGGGA........................................... 211.000.00---------------------------------1.00----------------
.....................................................................................................................................................................................................GTTCATGCCATTCTCCTGCCTCAGCCTCCCAC..................... 321.000.00--------1.00-----------------------------------------
.................................................................................................................................................................................................................CTCCTGCCTCAGCCTCCCTAGTTCAG............... 261.000.001.00-------------------------------------------------
..........................................................................................................................................................................................CCGCCTCCCGGGTTCATGCCATTCTCCTAA.................................. 301.000.00------------------------------------------1.00-------
...................................................................................................................................................................................GCAAGCTCCGCCTCCCGGGTTCATCGAG........................................... 281.000.00-1.00------------------------------------------------
.............................................................................................................................................................................................CCTCCCGGGTTCATGCCATTCTCCTGCGCGG.............................. 311.000.00-----------------1.00--------------------------------
...................................................................................................................................................................................................................................TAGTAGCTGGGACTACAGGCTGT 231.000.00-------1.00------------------------------------------
..........................................................................................................................................................................................CCGCCTCCCGGGTTCATG.............................................. 181.000.00----------1.00---------------------------------------
..........................................................................................................................................................................................CCGCCTCCCGGGTTCATGCCATTCCC...................................... 261.000.00------1.00-------------------------------------------
...............................................................................................................................................................................................................................TCCCTAGTAGCTGGGACTACAGGTC.. 251.000.00--------------------1.00-----------------------------
.......................................................................................................................................................................................GCTCCGCCTCCCGGGTTCATGCCATTCTGTAG................................... 321.000.00-------1.00------------------------------------------
...............................................................................................................................................................................................................TTCTCCTGCCTCAGCCTCCCTC..................... 221.000.00---------------------------------------------1.00----
...........................................................................................................................................................................................................GCCATTCTCCTGCCTCAGCCTCCCTAGTTCC................ 311.000.00-1.00------------------------------------------------
.........................................................................................................................................................................................TCCGCCTCCCGGGTTCATGCCAACC........................................ 251.000.001.00-------------------------------------------------
.........................................................................................................................................................................TTGGCTCACTGCAAGCTCCGTGA.......................................................... 231.000.00-------1.00------------------------------------------
..........................................................................................................................................................................................CCGCCTCCCGGGTTCATGCCATGAA....................................... 251.000.00-1.00------------------------------------------------
..................................................................................................................................................................................................................TCCTGCCTCAGCCTCCCTCAC................... 211.000.00-1.00------------------------------------------------
................................................................................................................................................................................................CCCGGGTTCATGCCATTCTCGGAA.................................. 241.000.00-----------------------------------------------1.00--
..........................................................................................................................................................................................CCGCCTCCCGGGTTCATGCCATTCTGGAC................................... 291.000.00-1.00------------------------------------------------
.................AAGAAGACATGGAAATT........................................................................................................................................................................................................................ 1790.110.11-------------------------------------------------0.11