ID: uc001whz.2_intron_6_0_chr14_23447655_r.3p
GENE: (1)
chr14:23447605-23447854-


(2)
AGO2.ip 		(1)
B-CELL 		(14)
BRAIN 		(10)
BREAST 		(13)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(1)
HEART 		(1)
HELA 		(5)
LIVER 		(4)
OTHER 		(10)
SKIN 		(1)
XRN.ip

Sense strand
TGAGTAATTAAATAAACAAGAATGGATCTGCTCAGCCAAGATCTTGCTGCATCTCATTACTCGTTATCTTCTCTACTCAGAAGGGAGCCCATCAAAGGGAGACTGTGACCCCTGGCACATCAGGAAAGGGCAGTCAGGAAAGCTTGGGAATCCCTGGTTTTGACCTGGGGGAGTAGAGTGTGACACTTTTCTCTTCTCAGGCACCTGTATCAAGTGCAACAAAGGCATCTATGGGCAGAGCAATGCCTGC
................................................................................................((....))....(((((((....((((((.((((...(((((....)))))....))))..)))))).)))))))...((((((...)))))).............................................................
..............................................................................................95............................................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR189782GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		TAX577746(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189787SRR189783SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR040024(GSM532909)
G613N. (cervix)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577745(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532883(GSM532883)
G871N. (cervix)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
.....................................................................................................................................................................TGGGGGAGTAGAGTGTATAG.................................................................20147.000.00129.004.001.00-3.00--3.00------1.001.00---1.00-----1.00--------------1.00----1.00-------1.00--------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTATGG.................................................................2064.000.0059.001.00-1.00-1.001.001.00------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTTTGG.................................................................2020.000.007.003.00-2.001.003.00--1.00---1.001.00-----1.00------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTTTAG.................................................................2017.000.0013.001.001.001.001.00---------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTTTGT.................................................................2017.000.002.003.001.003.002.00-1.00-1.00---1.00--2.00----------------1.00-----------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTTTG..................................................................1916.000.004.004.003.00--2.00--1.001.00----------1.00-----------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTAGAG.................................................................2012.000.0011.00------------------------1.00------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTATA..................................................................1910.000.006.00--1.00-----1.00--------1.00--------------------1.00----------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTATAT.................................................................2010.000.008.00---1.00-----1.00---------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTTTAT.................................................................206.000.002.003.001.00-----------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTGTAG.................................................................205.000.004.00-------------------------------------------------1.00-----------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTAGAC.................................................................205.000.005.00-------------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTATAA.................................................................204.000.001.00---1.00----1.00-----------1.00----------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTTTA..................................................................194.000.002.00-1.001.00----------------------------------------------------------
.............................................................................................................................................................................................................................AAGGCATCTATGGGCAGAGCAA.......2213.003.00-----------2.00------------------1.00-------------------------------
...................................................................................................AGACTGTGACCCCTGGCACA...................................................................................................................................2012.002.00----------------------2.00---------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTCTAG.................................................................202.000.001.00---------1.00---------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTATAC.................................................................202.000.002.00-------------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTAAAG.................................................................202.000.002.00-------------------------------------------------------------
..........................................................................................................................................................................................................................ACAAAGGCATCTATGGGCAGA...........2112.002.00-----------1.00------------------------------------1.00-------------
..........................................................................................................................................................................................................................ACAAAGGCATCTATGGGCAGAGC.........2312.002.00-----------------------2.00--------------------------------------
............................................................................................CAAAGGGAGACTGTGACCC...........................................................................................................................................1912.002.00-----------------2.00--------------------------------------------
........................................................................................................................................................................................ACTTTTCTCTTCTCAAAG................................................182.000.00---------------------------------------------------1.00--1.00-------
...................................................................................................................................................................................................................AAGTGCAACAAAGGCATCTATGG................2312.002.002.00-------------------------------------------------------------
............................................................................................................................................................................................................................AAAGGCATCTATGGGCAG............1812.002.00--------------1.00---------------------1.00-------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTGTAGT................................................................212.000.00-----1.00------------1.00-------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTTG...................................................................182.000.002.00-------------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTGTAGG................................................................212.000.00---1.00-1.00--------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTATTG.................................................................202.000.001.00---1.00---------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTATGA.................................................................201.000.001.00-------------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGAACA..................................................................191.000.001.00-------------------------------------------------------------
......................................................................................................................................................................GGGGGAGTAGAGTGTAAAG.................................................................191.000.001.00-------------------------------------------------------------
.........................................................................................CATCAAAGGGAGACTGT................................................................................................................................................1711.001.00--------------------------1.00-----------------------------------
.......................................................................................................................................................................................................................GCAACAAAGGCATCTATGG................1911.001.00--------------1.00-----------------------------------------------
.............................................................................................................................................................................................................TGTATCAAGTGCAACAAAGGCAT......................2311.001.00------------------------------------------1.00-------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGAATG..................................................................191.000.00--1.00-----------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTAGTT.................................................................201.000.00-------------------------------------------------1.00------------
.......................................................................................................................................................................................................................................TGGGCAGAGCAATGCTGG.181.000.00----------------------------------------------------1.00---------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTGACGTT...............................................................221.000.00-----------------------------------1.00--------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGGATG..................................................................191.000.001.00-------------------------------------------------------------
..............................................................................................................................................................................................................................AGGCATCTATGGGCAGAGCAATGCC...2511.001.00--------------------------------------1.00-----------------------
........................................................................................................................................................................................................................CAACAAAGGCATCTATGGGCAGA...........2311.001.00----------------------------------1.00---------------------------
..........................................................................................................................................................................................................................ACAAAGGCATCTATGGGCAGAAT.........2311.002.00----------------------------1.00---------------------------------
........................................................................................................................CAGGAAAGGGCAGTCAGGAAT.............................................................................................................211.000.00------------------------1.00-------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTGGAGT................................................................211.000.00----------1.00---------------------------------------------------
.............................................................................CAGAAGGGAGCCCATAATG..........................................................................................................................................................191.000.00-------1.00------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTTGAG.................................................................201.000.001.00-------------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTAA...................................................................181.000.00------1.00-------------------------------------------------------
.....................................................................................AGCCCATCAAAGGGAGACTGCCAC.............................................................................................................................................241.000.00-----------------------------------------1.00--------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTTTTT.................................................................201.000.00-------------1.00------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTAGAA.................................................................201.000.001.00-------------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGGAT...................................................................181.000.00-------------1.00------------------------------------------------
......................................................................................................................ATCAGGAAAGGGCAGTCAGGAAAGC...........................................................................................................2511.001.00----------------1.00---------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTGTA..................................................................191.000.00------1.00-------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTGTATG................................................................211.000.00--------1.00-----------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTATTT.................................................................201.000.00------1.00-------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTGACACT...............................................................2211.001.00-------------------------------1.00------------------------------
......................................................................................................................................................................GGGGGAGTAGAGTGTAAAA.................................................................191.000.001.00-------------------------------------------------------------
....................................................................................................................................................................CTGGGGGAGTAGAGTGTGTAGT................................................................221.000.00--------------------------------------------------------1.00-----
.....................................................................................................................................................................TGGGGGAGTAGAGTGTACAG.................................................................201.000.001.00-------------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTAG...................................................................181.000.00--------------------------------------------1.00-----------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTCTGC.................................................................201.000.00-----------------------------1.00--------------------------------
............................................................................................................................................................................................................................AAAGGCATCTATGGGCAGA...........1911.001.00----------------1.00---------------------------------------------
........................................................................................CCATCAAAGGGAGACTGTGA..............................................................................................................................................2011.001.00------------------------1.00-------------------------------------
...........................................................................................................ACCCCTGGCACATCAGGAAAGGGCAG.....................................................................................................................2611.001.00--------------------------1.00-----------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTTCAG.................................................................201.000.001.00-------------------------------------------------------------
................................................................................................................................................................................AGTGTGACACTTTTCTCTTCTCA...................................................2311.001.00-------------------------------------1.00------------------------
..........................................................................................................................................................................................................................ACAAAGGCATCTATGGGCAGAG..........2211.001.00----------------------------------------------1.00---------------
...GTAATTAAATAAACAAGAATGG.................................................................................................................................................................................................................................2211.001.00---------------------------1.00----------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGCAT...................................................................181.000.00------1.00-------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGAT....................................................................171.000.00--1.00-----------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTGTTGT................................................................211.000.00--------------------1.00-----------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTAAAT.................................................................201.000.001.00-------------------------------------------------------------
......................................................................................................................................................................GGGGGAGTAGAGTGTATAG.................................................................191.000.001.00-------------------------------------------------------------
..............................................................................................AAGGGAGACTGTGACCCCTGGCAC....................................................................................................................................2411.001.00---------------------------------1.00----------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTTTGA.................................................................201.000.00------------1.00-------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTGCCAC................................................................211.000.00-----------------------------------------------1.00--------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTGTGT.................................................................201.000.00-1.00------------------------------------------------------------
.....................................................................................................................................................................TGGGGGAGTAGAGTGTGTGGT................................................................211.000.00-------------------------------------------------------1.00------
.....................................................................................................................................................................TGGGGGAGTAGAGTGAATA..................................................................191.000.00-------------------------------------------1.00------------------
..............................................................................................................................................................................................................................AGGCATCTATGGGCAGAG..........1820.500.50---------------------------0.50----------------------------------
.............................................................................................................................................................TTTTGACCTGGGGGA..............................................................................1520.500.50----------------------------------------------------------0.50---
..............................................................................................................................................CTTGGGAATCCCTGGT............................................................................................1640.500.50---------------------------------------------------------0.50----
.............................................................................................................................................................................................................................AAGGCATCTATGGGCAGA...........1820.500.50----------------0.50---------------------------------------------
..............................................................................................................................................CTTGGGAATCCCTGGTG...........................................................................................1740.250.50-----------------------------------------------------------0.25--
.....................................................................................................................................................................................................................................TATGGGCAGAGCAAT......1550.200.20------------------------------------------------------------0.20-

Antisense strand
TGAGTAATTAAATAAACAAGAATGGATCTGCTCAGCCAAGATCTTGCTGCATCTCATTACTCGTTATCTTCTCTACTCAGAAGGGAGCCCATCAAAGGGAGACTGTGACCCCTGGCACATCAGGAAAGGGCAGTCAGGAAAGCTTGGGAATCCCTGGTTTTGACCTGGGGGAGTAGAGTGTGACACTTTTCTCTTCTCAGGCACCTGTATCAAGTGCAACAAAGGCATCTATGGGCAGAGCAATGCCTGC
................................................................................................((....))....(((((((....((((((.((((...(((((....)))))....))))..)))))).)))))))...((((((...)))))).............................................................
..............................................................................................95............................................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR189782GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		TAX577746(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189787SRR189783SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR040024(GSM532909)
G613N. (cervix)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577745(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532883(GSM532883)
G871N. (cervix)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
..............................................................................................AAGGGAGACTGTGACGGAG......................................................................................................................................... 191.000.00---------------------1.00----------------------------------------
........................TTGGCTGAGCAGATC................................................................................................................................................................................................................... 1550.200.20-------------------------------------------------------------0.20