ID: uc001war.1_intron_34_0_chr14_21896414_r.3p
GENE: (2)
chr14:21896364-21896613-


(1)
AGO2.ip
(5)
B-CELL
(1)
BRAIN
(2)
BREAST
(8)
CELL-LINE
(2)
CERVIX
(3)
HEART
(5)
OTHER
(37)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
AGAATTCTTGGTTTTTCTCACCCCTTTCCCACCAAAAGAATACATTTTAAAAAGTAGGTGTAGGTTCAATAAGATTTAGTCTGAGCTTGATTCTTGAGGGATTAAAGAACTAGTTTCTAGCCCCCCTGCTTCAGAGCTGGATTTTATTTAGGCCATTTAACTACAAGCAAGTTGAAATTGTAGTATCTTTGTTTCTATAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGGGCTCTCTGTAGTTAAAGTTCT
..................................................((((..(((.((.....(((((((((((((((((((..........((..((((......))))..)).........))).)))).)))))))))))))).))).....(((((((.((...))...)))))))..))))............................................................
..................................................51............................................................................................................................................193.......................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR343337SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR343336SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR343334SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR040011(GSM532896)
G529T. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR037931(GSM510469)
293GFP. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343335SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040012(GSM532897)
G648N. (cervix)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
............................................................................................................................................................................TGAAATTGTAGTATCGG.............................................................1742.000.0019.001.00--1.001.002.00-1.002.001.001.00--2.001.001.00--------1.001.001.00-----------1.00--1.00-----1.00------1.001.00--1.00----
............................................................................................................................................................................TGAAATTGTAGTATCGGT............................................................1830.000.00-3.001.00-3.003.00-2.001.00---2.002.00-1.00-1.002.00--2.00-1.00----1.00-----1.00--------1.00--1.00-----1.00--------1.00--
............................................................................................................................................................................TGAAATTGTAGTATCGGTG...........................................................1923.000.00-2.003.00---1.00-1.00-1.001.00-----1.00-2.00--2.00------1.00---1.00-1.001.00----1.00---1.00-----1.00------1.00-1.00---
............................................................................................................................................................................TGAAATTGTAGTATCG..............................................................166.000.00--1.00------1.00------1.00-------------1.00-------------1.00----1.00--------------
..........................................................................................................................................................................GTTGAAATTGTAGTAATC..............................................................184.000.00---4.00------------------------------------------------------------
............................................................................................................................................................................TGAAATTGTAGTATCGTT............................................................182.000.00--------------------2.00-------------------------------------------
................................................................................................................................................................................ATTGTAGTATCTTTGTTTCTATAG..................................................2412.002.00-------------------------------------1.00--1.00-----------------------
............................................TTTTAAAAAGTAGGTGTAG...........................................................................................................................................................................................1911.001.00-----------------------1.00----------------------------------------
.......................................................................................................................................................................................TATCTTTGTTTCTATAGGCTGGCT...........................................2411.001.00-------1.00--------------------------------------------------------
............................................................................................................................................................................TGAAATTGTAGTATCGGCG...........................................................191.000.00--------------------------------------1.00-------------------------
.......................................................................................................................................................GCCATTTAACTACAACCCC................................................................................191.000.00--------------------------------1.00-------------------------------
...........................................................................................................................................................................TTGAAATTGTAGTATCTTTGTTTCTATAGGC................................................3111.001.00------------------------1.00---------------------------------------
.................TCACCCCTTTCCCACCACTC.....................................................................................................................................................................................................................201.000.00--------------------------------------------------1.00-------------
...................................................AAGTAGGTGTAGGTTCA......................................................................................................................................................................................1711.001.00---------------------------------------------------------1.00------
..............................................................................GTCTGAGCTTGATTCTTTTC........................................................................................................................................................201.000.00-----------------------------------------------------1.00----------
...................................................................................................................................................................................GTAGTATCTTTGTTTCTAT....................................................1911.001.00-----------------------------------------------1.00----------------
........................................................................................................................................................................................................................................CTCTGTAGTTAAAGTTC.1720.500.50---------------------------------------------------------------0.50

Antisense strand
AGAATTCTTGGTTTTTCTCACCCCTTTCCCACCAAAAGAATACATTTTAAAAAGTAGGTGTAGGTTCAATAAGATTTAGTCTGAGCTTGATTCTTGAGGGATTAAAGAACTAGTTTCTAGCCCCCCTGCTTCAGAGCTGGATTTTATTTAGGCCATTTAACTACAAGCAAGTTGAAATTGTAGTATCTTTGTTTCTATAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGGGCTCTCTGTAGTTAAAGTTCT
..................................................((((..(((.((.....(((((((((((((((((((..........((..((((......))))..)).........))).)))).)))))))))))))).))).....(((((((.((...))...)))))))..))))............................................................
..................................................51............................................................................................................................................193.......................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR343337SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR343336SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR343334SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR040011(GSM532896)
G529T. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR037931(GSM510469)
293GFP. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343335SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040012(GSM532897)
G648N. (cervix)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
..........................TCCCACCAAAAGAATCGTG............................................................................................................................................................................................................. 191.000.00--------------------------------------------------------------1.00-
................................................................................................................................CTTCAGAGCTGGATTTTG........................................................................................................ 181.000.00-------------------------------1.00--------------------------------
........................................................................................................................CCCCCCTGCTTCAGAGG................................................................................................................. 171.000.00------------------------------------------------------1.00---------