ID: uc001vyv.2_intron_13_0_chr14_21491481_r.5p
GENE: (2)
chr14:21491945-21492194-


(1)
AGO1.ip
(3)
B-CELL
(4)
BRAIN
(4)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(2)
LIVER
(2)
OTHER
(4)
SKIN

Sense strand
AGCCCAGTAAGTGACCCCACCCCGCAGGCTGCAGGCTCCTTCCTGTGCAGGTCTGTCCAGGTGCTCTGCTCCTCACCCACTAATGTTGAACTTGCGGAGTTTATTCAGAGTTGGGAGGAAGGGTCTTGGGAGGAAGGGAGGCATTGGGTTGGTTGGACAGATGTCCCTTTTATGTTGTTTTCCCCACCTCCCCCATTGGTCATGTTGCTTTGGTCATTTTTAGCCCCCTTTGAGCTGCCGACTTTGGGGC
........................................................................((.((((((.....(((((((...))))))).....))).)))..))...................................................................................................................................
........................................................................73.......................................................130......................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189787SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR040008(GSM532893)
G727N. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................................................AGTTGGGAGGAAGGGCAG............................................................................................................................186.000.00--3.00-3.00---------------------
............................................................................................................AGTTGGGAGGAAGGGCAGT...........................................................................................................................194.000.00--2.00-2.00---------------------
.............................................................................................................GTTGGGAGGAAGGGTTGT...........................................................................................................................183.000.00-------2.00------------1.00-----
.............................................................................................................GTTGGGAGGAAGGGTTGTA..........................................................................................................................192.000.00--------2.00-----------------
.............................................................................CACTAATGTTGAACTTGCGG.........................................................................................................................................................2012.002.002.00-------------------------
................................................................................................................................................TGGGTTGGTTGGACAGATGT......................................................................................2011.001.001.00-------------------------
............................................................................................TGCGGAGTTTATTCAGAGTTGGGAGGAA..................................................................................................................................2811.001.001.00-------------------------
..................................................................................ATGTTGAACTTGCGGAGA......................................................................................................................................................1811.001.00-1.00------------------------
......GTAAGTGACCCCACCCCGCAGGCTGC..........................................................................................................................................................................................................................2611.001.00-----1.00--------------------
...........................................................................................................................................GGCATTGGGTTGGTTGGACAGATG.......................................................................................2411.001.001.00-------------------------
..........................................................................................................................................AGGCATTGGGTTGGTTGGACAGAT........................................................................................2411.001.001.00-------------------------
...........................................................................................................................................................GACAGATGTCCCTTTTATGTT..........................................................................2111.001.00------1.00-------------------
...........................................................................................................................................GGCATTGGGTTGGTTGGACAGATGT......................................................................................2511.001.00---------1.00----------------
.........................AGGCTGCAGGCTCCTTCCTGTGC..........................................................................................................................................................................................................2311.001.00-----1.00--------------------
...................................................................................TGTTGAACTTGCGGAG.......................................................................................................................................................1611.001.001.00-------------------------
..............................................GCAGGTCTGTCCAGGTGC..........................................................................................................................................................................................1811.001.001.00-------------------------
..............................................................................................................................................ATTGGGTTGGTTGGACAGATGT......................................................................................2211.001.00-1.00------------------------
...........................................................................................................................................GGCATTGGGTTGGTTGGACAGA.........................................................................................2211.001.001.00-------------------------
..............................................................................................................................................ATTGGGTTGGTTGGACA...........................................................................................1711.001.00-1.00------------------------
.................................................................................AATGTTGAACTTGCGGAGTT.....................................................................................................................................................2011.001.00---------1.00----------------
.................................................................................................................................................................................................CATTGGTCATGTTGCACA.......................................181.000.00-------------1.00------------
..................................................................................................................................AGGAAGGGAGGCATTGGGTTGGTT................................................................................................2411.001.00---1.00----------------------
.....................................................................................................................................AAGGGAGGCATTGGGTTGGTTGGACAGA.........................................................................................2811.001.001.00-------------------------
.............................................................................................................................................CATTGGGTTGGTTGGACAGATGTC.....................................................................................2411.001.00---1.00----------------------
.......................................................................................................................................................................TTTTATGTTGTTTTCCCCACCTCCCC.........................................................2611.001.00------------1.00-------------
...................................................................................................................................................................................................TTGGTCATGTTGCTTTATTA...................................201.000.00-----------1.00--------------
...................................................................................................................................................GTTGGTTGGACAGATGT......................................................................................1711.001.00----------1.00---------------
..........................................................................................................AGAGTTGGGAGGAAGGGT..............................................................................................................................1811.001.00------------------1.00-------
.............................................................................................................GTTGGGAGGAAGGGTAGTA..........................................................................................................................191.000.00---------------------1.00----
...................................................................................................................................................................TCCCTTTTATGTTGTTTTCCCCACCTCCC..........................................................2911.001.00-----1.00--------------------
............................................................................................................................................GCATTGGGTTGGTTGGAC............................................................................................1811.001.001.00-------------------------
..............................................................................................................................................ATTGGGTTGGTTGGACAGATG.......................................................................................2111.001.00---1.00----------------------
................................................................................TAATGTTGAACTTGCGCCG.......................................................................................................................................................191.000.00---1.00----------------------
...............................................................CTCTGCTCCTCACCCACTAATGTTG..................................................................................................................................................................2511.001.00-----------------1.00--------
...................................................TCTGTCCAGGTGCTCTGCTCCTCACC.............................................................................................................................................................................2611.001.001.00-------------------------
................................................................................TAATGTTGAACTTGCGGAG.......................................................................................................................................................1911.001.001.00-------------------------
..............................................................................ACTAATGTTGAACTTGCGGAGTTT....................................................................................................................................................2411.001.00-1.00------------------------
..................ACCCCGCAGGCTGCAGGCTCCTTCCCG.............................................................................................................................................................................................................271.000.00----------------1.00---------
.............................................................................CACTAATGTTGAACTTGCGGA........................................................................................................................................................2111.001.00------1.00-------------------
...........................................................................................TTGCGGAGTTTATTCAGAGTT..........................................................................................................................................2111.001.00-1.00------------------------
..................................................................................................................................................GGTTGGTTGGACAGATGT......................................................................................1811.001.00----------------------1.00---
...........................................................................CCCACTAATGTTGAACTTGCGGA........................................................................................................................................................2311.001.00-------------------1.00------
.................................................................................AATGTTGAACTTGCGGAG.......................................................................................................................................................1811.001.00-1.00------------------------
..............................................................................................................................................ATTGGGTTGGTTGGACAGATGTC.....................................................................................2311.001.00-1.00------------------------
..................................................................................ATGTTGAACTTGCGGAG.......................................................................................................................................................1711.001.00---1.00----------------------
.......................................TTCCTGTGCAGGTCTGTCCAGGTGCTCTGC.....................................................................................................................................................................................3011.001.001.00-------------------------
....................................................................................................................................................TTGGTTGGACAGATG.......................................................................................1540.250.25-------------------------0.25

Antisense strand
AGCCCAGTAAGTGACCCCACCCCGCAGGCTGCAGGCTCCTTCCTGTGCAGGTCTGTCCAGGTGCTCTGCTCCTCACCCACTAATGTTGAACTTGCGGAGTTTATTCAGAGTTGGGAGGAAGGGTCTTGGGAGGAAGGGAGGCATTGGGTTGGTTGGACAGATGTCCCTTTTATGTTGTTTTCCCCACCTCCCCCATTGGTCATGTTGCTTTGGTCATTTTTAGCCCCCTTTGAGCTGCCGACTTTGGGGC
........................................................................((.((((((.....(((((((...))))))).....))).)))..))...................................................................................................................................
........................................................................73.......................................................130......................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189787SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR040008(GSM532893)
G727N. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................................................................................................................................TTGAGCTGCCGACTTTCTG.. 191.000.00--------------1.00-----------
...............................CAGGCTCCTTCCTGTGACC........................................................................................................................................................................................................ 191.000.00-----------------------1.00--
........AAGTGACCCCACCCCCAG................................................................................................................................................................................................................................ 181.000.00---------------1.00----------
...................................CTGGACAGACCTGCACAGGAAGGAG.............................................................................................................................................................................................. 2511.001.00------------------------1.00-