uc001vox.1_intron_4_0_chr13_101717914

TTTATCACTCAGTTTTCTATCCTCTGCTCTTCTTAGTGCACTTAATTCTACCAGGCTCCAAGGAGGTGACCAGCTTTCTTCACATCTGGTGCTAATTATGCTAGCTTTTGAGAAATAGCACCTTTTTTTTTTTCTTTTGAGAAACCCAAGTGAATCATCGAGGCCTGATGATTTGCTACTTCTTGTGCTCTGCCCCGCAGGGGGTGATCCCCACGTTCCGCGTCAAGTTCCTGCTGCGGCTACTGCGTGG ......................................................................................................................(((.......((((((....)))))).....))).(((((((.....))))))).............................................................................. .................................................................................................................114.......................................................172............................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189785	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189784	GSM450608(GSM450608) miRNA sequencing raw reads from post-mortem s. (brain)	SRR040043(GSM532928) G428T. (cervix)	SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver)	SRR189783
......................................................................................................................CACCTTTTTTTTTTTCTTCAG...............................................................................................................	21		15.00	0.00	-	8.00	-	6.00	1.00	-	-	-	-	-	-	-	-
......................................................................................................................CACCTTTTTTTTTTTCTTTAAG..............................................................................................................	22		6.00	0.00	-	2.00	-	1.00	2.00	1.00	-	-	-	-	-	-	-
.......................................................................................................................ACCTTTTTTTTTTTCTTTCCAG.............................................................................................................	22		3.00	0.00	1.00	-	-	-	2.00	-	-	-	-	-	-	-	-
.......................................................................................................................ACCTTTTTTTTTTTCTTTTGACGG...........................................................................................................	24		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................................TAGCACCTTTTTTTTTTTCTCAGG...............................................................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................TTTTTTTTTTTCTTTTGAGAAAGCG.......................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................TTTTTTTTTTCTTTTGAGTTTG.........................................................................................................	22		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................ACCTTTTTTTTTTTCTTTCGAG.............................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................TTTTTTTTTCTTTTGAGAAGTGC.......................................................................................................	23		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
....................................................................................................................AGCACCTTTTTTTTTTCGG...................................................................................................................	19		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................................CCTTTTTTTTTTTCTTTTGTTTC...........................................................................................................	23		1.00	0.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-
.......................................................................................................................ACCTTTTTTTTTTTCTTTCTGG.............................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................ATAGCACCTTTTTTTTTTTCTTTTGAG.............................................................................................................	27	1	1.00	1.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................ACCTTTTTTTTTTTCTTGAC...............................................................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................GCACCTTTTTTTTTTTCTTTTAT..............................................................................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................................CACCTTTTTTTTTTTCTTTAACA.............................................................................................................	23		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-
.......................................................................................................................ACCTTTTTTTTTTTCTTCTCG..............................................................................................................	21		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-
......................................................................................................................CACCTTTTTTTTTTTCTTTCAG..............................................................................................................	22		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-
.....................................................................................................................................................GTGAATCATCGAGGCTTTG..................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	1.00	-	-	-	-
......................................................................................................................CACCTTTTTTTTTTTCTTTAGA..............................................................................................................	22		1.00	0.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-
..........................................................................................................................TTTTTTTTTTTCTTTTGAGTTTG.........................................................................................................	23		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................CTTTTTTTTTTTCTTTTGGACC...........................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................AGCACCTTTTTTTTTTTGCGG.................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................TTTTTTTTTTTCTTTTGAGAAAAAGC......................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................................CACCTTTTTTTTTTTCTTCAA...............................................................................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................TTTTTTTTCTTTTGAGTTCG.........................................................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................ACCTTTTTTTTTTTCTTTTGAAAC...........................................................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................ACCTTTTTTTTTTTCTTTGTG..............................................................................................................	21		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-
.......................................................................................................................ACCTTTTTTTTTTTCTTTTGCTT............................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
............TTTTCTATCCTCTGCTGT............................................................................................................................................................................................................................	18		1.00	0.00	-	-	-	-	-	-	-	-	-	-	1.00	-	-
..........AGTTTTCTATCCTCTG................................................................................................................................................................................................................................	16	7	1.00	1.00	-	-	-	-	0.14	-	-	-	-	-	-	-	0.86
.......................................................................................................................ACCTTTTTTTTTTTCTTTTAAAG............................................................................................................	23		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-
......................................................................................................................CACCTTTTTTTTTTTCTTCTTG..............................................................................................................	22		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-
......................................................................................................................CACCTTTTTTTTTTTCTTTTATAG............................................................................................................	24		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-
...........................................................................................................................TTTTTTTTTTCTTTTGAGTTGT.........................................................................................................	22		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
......................................................................................................................CACCTTTTTTTTTTTCTCCAG...............................................................................................................	21		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-
......................................................................................................................CACCTTTTTTTTTTTCTCCGG...............................................................................................................	21		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-
.......................................................................................................................ACCTTTTTTTTTTTCTTTTGGGG............................................................................................................	23		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................ACCTTTTTTTTTTTCTTGGC...............................................................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................GCACCTTTTTTTTTTCAAA..................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-
....................................................................................................................AGCACCTTTTTTTTTTTCTTTCC...............................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................TTTTTTTTTCTTTTGAGAACAG........................................................................................................	22		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
............................................................................................................................TTTTTTTTTCTTTTGAGCTTG.........................................................................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
......................................................................................................................CACCTTTTTTTTTTTCTTTTCG..............................................................................................................	22		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-
.......................................................................................................................ACCTTTTTTTTTTTCTTCTGA..............................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................................CACCTTTTTTTTTTTCTTTTCTG.............................................................................................................	23		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-
......................................................................................................................CACCTTTTTTTTTTTCTTTATG..............................................................................................................	22		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-
.........................................................................................................................CTTTTTTTTTTTCTTTTGGGTC...........................................................................................................	22		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................ACCTTTTTTTTTTTCTTTCCA..............................................................................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................ACCTTTTTTTTTTTCTTTGAC..............................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.................TATCCTCTGCTCTTCCCCA......................................................................................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-
.......................................................................................................................ACCTTTTTTTTTTTCTTTTACAG............................................................................................................	23		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................TTTTTTTTTTTCTTTTGAGTAGG.........................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................ACCTTTTTTTTTTTCTTTGCTG.............................................................................................................	22		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-
......................................................................................................................CACCTTTTTTTTTTTCTTTACG..............................................................................................................	22		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-
......................................................................................................................CACCTTTTTTTTTTTCTTTTG...............................................................................................................	21	6	0.50	0.50	-	-	-	0.17	0.17	0.17	-	-	-	-	-	-	-

TTTATCACTCAGTTTTCTATCCTCTGCTCTTCTTAGTGCACTTAATTCTACCAGGCTCCAAGGAGGTGACCAGCTTTCTTCACATCTGGTGCTAATTATGCTAGCTTTTGAGAAATAGCACCTTTTTTTTTTTCTTTTGAGAAACCCAAGTGAATCATCGAGGCCTGATGATTTGCTACTTCTTGTGCTCTGCCCCGCAGGGGGTGATCCCCACGTTCCGCGTCAAGTTCCTGCTGCGGCTACTGCGTGG
......................................................................................................................(((.......((((((....)))))).....))).(((((((.....)))))))..............................................................................
.................................................................................................................114.......................................................172............................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189785

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189784

GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR040043(GSM532928)
G428T. (cervix)

SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)

SRR189783

......................................................................................................................CACCTTTTTTTTTTTCTTCAG...............................................................................................................

15.00

0.00

8.00

6.00

1.00

......................................................................................................................CACCTTTTTTTTTTTCTTTAAG..............................................................................................................

6.00

0.00

2.00

1.00

2.00

1.00

.......................................................................................................................ACCTTTTTTTTTTTCTTTCCAG.............................................................................................................

3.00

0.00

1.00

2.00

.......................................................................................................................ACCTTTTTTTTTTTCTTTTGACGG...........................................................................................................

2.00

0.00

2.00

...................................................................................................................TAGCACCTTTTTTTTTTTCTCAGG...............................................................................................................

1.00

0.00

1.00

..........................................................................................................................TTTTTTTTTTTCTTTTGAGAAAGCG.......................................................................................................

1.00

0.00

1.00

...........................................................................................................................TTTTTTTTTTCTTTTGAGTTTG.........................................................................................................

1.00

0.00

1.00

.......................................................................................................................ACCTTTTTTTTTTTCTTTCGAG.............................................................................................................

1.00

0.00

1.00

............................................................................................................................TTTTTTTTTCTTTTGAGAAGTGC.......................................................................................................

1.00

0.00

1.00

....................................................................................................................AGCACCTTTTTTTTTTCGG...................................................................................................................

1.00

0.00

1.00

........................................................................................................................CCTTTTTTTTTTTCTTTTGTTTC...........................................................................................................

1.00

0.00

1.00

.......................................................................................................................ACCTTTTTTTTTTTCTTTCTGG.............................................................................................................

1.00

0.00

1.00

..................................................................................................................ATAGCACCTTTTTTTTTTTCTTTTGAG.............................................................................................................

1.00

.......................................................................................................................ACCTTTTTTTTTTTCTTGAC...............................................................................................................

1.00

0.00

1.00

.....................................................................................................................GCACCTTTTTTTTTTTCTTTTAT..............................................................................................................

1.00

0.00

1.00

......................................................................................................................CACCTTTTTTTTTTTCTTTAACA.............................................................................................................

1.00

0.00

1.00

.......................................................................................................................ACCTTTTTTTTTTTCTTCTCG..............................................................................................................

1.00

0.00

1.00

......................................................................................................................CACCTTTTTTTTTTTCTTTCAG..............................................................................................................

1.00

0.00

1.00

.....................................................................................................................................................GTGAATCATCGAGGCTTTG..................................................................................

1.00

0.00

1.00

......................................................................................................................CACCTTTTTTTTTTTCTTTAGA..............................................................................................................

1.00

0.00

1.00

..........................................................................................................................TTTTTTTTTTTCTTTTGAGTTTG.........................................................................................................

1.00

0.00

1.00

.........................................................................................................................CTTTTTTTTTTTCTTTTGGACC...........................................................................................................

1.00

0.00

1.00

....................................................................................................................AGCACCTTTTTTTTTTTGCGG.................................................................................................................

1.00

0.00

1.00

..........................................................................................................................TTTTTTTTTTTCTTTTGAGAAAAAGC......................................................................................................

1.00

0.00

1.00

......................................................................................................................CACCTTTTTTTTTTTCTTCAA...............................................................................................................

1.00

0.00

1.00

.............................................................................................................................TTTTTTTTCTTTTGAGTTCG.........................................................................................................

1.00

0.00

1.00

.......................................................................................................................ACCTTTTTTTTTTTCTTTTGAAAC...........................................................................................................

1.00

0.00

1.00

.......................................................................................................................ACCTTTTTTTTTTTCTTTGTG..............................................................................................................

1.00

0.00

1.00

.......................................................................................................................ACCTTTTTTTTTTTCTTTTGCTT............................................................................................................

1.00

0.00

1.00

............TTTTCTATCCTCTGCTGT............................................................................................................................................................................................................................

1.00

0.00

1.00

..........AGTTTTCTATCCTCTG................................................................................................................................................................................................................................

1.00

0.14

0.86

.......................................................................................................................ACCTTTTTTTTTTTCTTTTAAAG............................................................................................................

1.00

0.00

1.00

......................................................................................................................CACCTTTTTTTTTTTCTTCTTG..............................................................................................................

1.00

0.00

1.00

......................................................................................................................CACCTTTTTTTTTTTCTTTTATAG............................................................................................................

1.00

0.00

1.00

...........................................................................................................................TTTTTTTTTTCTTTTGAGTTGT.........................................................................................................

1.00

0.00

1.00

......................................................................................................................CACCTTTTTTTTTTTCTCCAG...............................................................................................................

1.00

0.00

1.00

......................................................................................................................CACCTTTTTTTTTTTCTCCGG...............................................................................................................

1.00

0.00

1.00

.......................................................................................................................ACCTTTTTTTTTTTCTTTTGGGG............................................................................................................

1.00

0.00

1.00

.......................................................................................................................ACCTTTTTTTTTTTCTTGGC...............................................................................................................

1.00

0.00

1.00

.....................................................................................................................GCACCTTTTTTTTTTCAAA..................................................................................................................

1.00

0.00

1.00

....................................................................................................................AGCACCTTTTTTTTTTTCTTTCC...............................................................................................................

1.00

0.00

1.00

............................................................................................................................TTTTTTTTTCTTTTGAGAACAG........................................................................................................

1.00

0.00

1.00

............................................................................................................................TTTTTTTTTCTTTTGAGCTTG.........................................................................................................

1.00

0.00

1.00

......................................................................................................................CACCTTTTTTTTTTTCTTTTCG..............................................................................................................

1.00

0.00

1.00

.......................................................................................................................ACCTTTTTTTTTTTCTTCTGA..............................................................................................................

1.00

0.00

1.00

......................................................................................................................CACCTTTTTTTTTTTCTTTTCTG.............................................................................................................

1.00

0.00

1.00

......................................................................................................................CACCTTTTTTTTTTTCTTTATG..............................................................................................................

1.00

0.00

1.00

.........................................................................................................................CTTTTTTTTTTTCTTTTGGGTC...........................................................................................................

1.00

0.00

1.00

.......................................................................................................................ACCTTTTTTTTTTTCTTTCCA..............................................................................................................

1.00

0.00

1.00

.......................................................................................................................ACCTTTTTTTTTTTCTTTGAC..............................................................................................................

1.00

0.00

1.00

.................TATCCTCTGCTCTTCCCCA......................................................................................................................................................................................................................

1.00

0.00

1.00

.......................................................................................................................ACCTTTTTTTTTTTCTTTTACAG............................................................................................................

1.00

0.00

1.00

..........................................................................................................................TTTTTTTTTTTCTTTTGAGTAGG.........................................................................................................

1.00

0.00

1.00

.......................................................................................................................ACCTTTTTTTTTTTCTTTGCTG.............................................................................................................

1.00

0.00

1.00

......................................................................................................................CACCTTTTTTTTTTTCTTTACG..............................................................................................................

1.00

0.00

1.00

......................................................................................................................CACCTTTTTTTTTTTCTTTTG...............................................................................................................

0.50

0.17