ID: uc001vky.2_intron_17_0_chr13_79946066_r.3p
GENE: RBM26(3)
chr13:79946016-79946265-


(1)
AGO1.ip
(3)
AGO2.ip
(5)
B-CELL
(2)
BRAIN
(2)
BREAST
(20)
CELL-LINE
(1)
CERVIX
(2)
HEART
(2)
HELA
(5)
LIVER
(2)
OTHER
(10)
SKIN
(1)
XRN.ip

Sense strand
ATCTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTGTCGAACTTCCGACTTCGTGAACCACCCGCCTCAGCCTCCCAAAGTGCTGGCATTACAGGCATGAACCACTGTGCCCAGCCCTATCTAAGGCTATTTAACAGTGGAATAATTACTAAACTTGTACACTTTTTTTTTTTTTTTTAATCAGATCACTAAGGAGGAAGAGCGAGAGAAGAAGTTTTCTAGAAGGCTAAATCA
....................................................................(((.((.....((((((((((.....)).)))).......)))).....(((((((....((((........)))).....)))))))................)).)))........................................................................
..................................................................67...................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR343334SRR037936(GSM510474)
293cand1. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
TAX577590(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR343335SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTAATCAG..................................................242238.50238.50106.50122.00-5.00-5.00------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTATTG....................................................24172.000.00107.0044.00-14.00-7.00------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTATTT....................................................2413.000.007.005.00-1.00--------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTAACTG...................................................2511.000.003.003.001.00--4.00------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTACG.......................................................2210.000.004.005.00-1.00--------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTATGG....................................................248.000.007.001.00----------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTACG.....................................................248.000.004.003.00---1.00------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTAATATG..................................................267.000.002.003.00---2.00------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTCTTG....................................................247.000.00--3.002.00-1.00-1.00----------------------------------------------
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTAATCAT..................................................2446.253.002.753.25-0.25--------------------------------------------------
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTATTAG...................................................236.000.001.003.00--1.00--1.00----------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTCGAG....................................................246.000.00--5.00-1.00-------------------------------------------------
...............................................................................................................................................................................CACTTTTTTTTTTTTTTTTACAG....................................................235.000.002.001.00-1.00-1.00------------------------------------------------
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTAATCGG..................................................245.000.002.003.00----------------------------------------------------
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTATAAG...................................................235.000.004.00--1.00--------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTCTGG....................................................244.000.00--4.00---------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTCG......................................................224.000.002.00----2.00------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTCCG.....................................................233.000.001.001.00---1.00------------------------------------------------
............TTAGTAGAGACAGGGTTTAAG.........................................................................................................................................................................................................................213.000.00------3.00-----------------------------------------------
..............AGTAGAGACAGGGTTTAGAA........................................................................................................................................................................................................................203.000.00------3.00-----------------------------------------------
...............................................................................................................................................................................CACTTTTTTTTTTTTTTTTATAG....................................................233.000.002.00--1.00--------------------------------------------------
...............................................................................................................................................................................CACTTTTTTTTTTTTTTTTAACATG..................................................253.000.00---1.00-2.00------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTCGGT....................................................243.000.00--2.00-1.00-------------------------------------------------
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTATCCG...................................................233.000.001.002.00----------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTAAAAG...................................................263.000.002.00------1.00----------------------------------------------
...............................................................................................................................................................................................................AGGAGGAAGAGCGAGAGAAGAAGTTTCC...............283.000.00----3.00-------------------------------------------------
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTAATCA...................................................2343.003.001.501.50----------------------------------------------------
...........TTTAGTAGAGACAGGGTTTAGA.........................................................................................................................................................................................................................223.000.00------3.00-----------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTATTA....................................................243.000.001.00--2.00--------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTAAAA....................................................253.000.001.002.00----------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTACT.....................................................243.000.00-2.00---1.00------------------------------------------------
.............................................................................................................................CCCAGCCCTATCTAAAG............................................................................................................172.000.00---------------------1.00----------------1.00---------------
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTATTCA...................................................232.000.001.001.00----------------------------------------------------
......GTATTTTTAGTAGAGACAGGGTAGA...........................................................................................................................................................................................................................252.000.00------2.00-----------------------------------------------
...............................................................................................................................................................................................................AGGAGGAAGAGCGAGAGAAGAAGTTTTCTAG............3112.002.00----2.00-------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTCTTT....................................................242.000.00---1.00---1.00----------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTAATGG...................................................252.000.001.001.00----------------------------------------------------
....................................GTTGGCCAGGCTGGTGGGGA..................................................................................................................................................................................................202.000.00------------2.00-----------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTAATCAG..................................................2612.002.00--1.001.00--------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTATT.....................................................232.000.001.001.00----------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTCTAG.........................................................202.000.00---2.00--------------------------------------------------
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTATCTG...................................................232.000.001.00-1.00---------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTCGG.....................................................232.000.00--1.00-1.00-------------------------------------------------
.........TTTTTAGTAGAGACAGGGTTTAACC........................................................................................................................................................................................................................252.000.00-----------------2.00------------------------------------
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTAATCAA..................................................2441.503.000.501.00----------------------------------------------------
...............................................................................................................................................................................................................AGGAGGAAGAGCGAGAGAAGAAGC...................241.000.00----1.00-------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTCGT.....................................................231.000.00----------1.00-------------------------------------------
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTATGGT...................................................231.000.00--1.00---------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTAAAATG..................................................271.000.00---1.00--------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTACAG....................................................241.000.00-----1.00------------------------------------------------
.......................................................................AACCACCCGCCTCAGCCTCAGC.............................................................................................................................................................221.000.00----1.00-------------------------------------------------
..........................................................................................................................................................................................................CACTAAGGAGGAAGAGCGAGAGAAG.......................2511.001.00------1.00-----------------------------------------------
.................................................................................................................TGAACCACTGTGCCCAGCCCAGCC.................................................................................................................241.000.00--1.00---------------------------------------------------
..........................................................................................................ACAGGCATGAACCACTGTGCCCAGCCCGAC..................................................................................................................301.000.00--1.00---------------------------------------------------
...............................................................................................................................................................................................................AGGAGGAAGAGCGAGAGAAGAAGTTTCCT..............291.000.00----1.00-------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTCTTG....................................................251.000.00-----1.00------------------------------------------------
...........................................................................................................................................................................TGTACACTTTTTTTTTTTCGG..........................................................211.000.00----1.00-------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTAATCTGG.................................................271.000.00--1.00---------------------------------------------------
.............TAGTAGAGACAGGGTAGA...........................................................................................................................................................................................................................181.000.00----------------------------------------1.00-------------
............................................................................................................................................................................GTACACTTTTTTTTTTTTTTAAGG......................................................241.000.00-------------1.00----------------------------------------
..................................................................................................................................................................................................AATCAGATCACTAAGGAGCCTG..................................221.000.00----1.00-------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTATAAT...................................................261.000.00---1.00--------------------------------------------------
...........................................................................................................................................................................TGTACACTTTTTTTTTTTTCTGG........................................................231.000.00--1.00---------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTAAAAA...................................................261.000.001.00-----------------------------------------------------
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTAATCCTTG................................................261.000.00-----1.00------------------------------------------------
...................................................................................................................AACCACTGTGCCCAGCCCAGCC.................................................................................................................221.000.00--1.00---------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTACCC....................................................241.000.00--1.00---------------------------------------------------
...............................................................................................................................................................................................................AGGAGGAAGAGCGAGAGAAGAAGTCT.................261.000.00----1.00-------------------------------------------------
.......................................................................................................ATTACAGGCATGAACCACTGAT.............................................................................................................................221.000.00------------------------------------------1.00-----------
..........................................................................CACCCGCCTCAGCCTCGTAC............................................................................................................................................................201.000.00-----------------------------------------1.00------------
..............................................................................................................................................................................................................AAGGAGGAAGAGCGAGAGAAGAAGTCCAG...............2911.001.00----1.00-------------------------------------------------
..............................................................................................................................................................................................................AAGGAGGAAGAGCGAGAGAAGAAGT...................2511.001.00-------------1.00----------------------------------------
................................CCATGTTGGCCAGGCTGGTGTCGATA................................................................................................................................................................................................261.000.00---------------------------------------------1.00--------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTCGGG....................................................241.000.00----1.00-------------------------------------------------
.......................................GGCCAGGCTGGTGTCGA..................................................................................................................................................................................................1701.001.00------------------------------------1.00-----------------
..........................................................................................................................................................................................................CACTAAGGAGGAAGAGCGAGAGAAGA......................2611.001.00------1.00-----------------------------------------------
.TCTTTGTATTTTTAGTAGAGACAGGGTCGCG..........................................................................................................................................................................................................................311.000.00----1.00-------------------------------------------------
.................................................................................................................................................................................CTTTTTTTTTTTTTTTTAATCAATG................................................251.000.001.00-----------------------------------------------------
...............................................................................................................................................................................CACTTTTTTTTTTTTTTTTATTTA...................................................241.000.00-1.00----------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTATATG...................................................251.000.001.00-----------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTAACCAG..................................................261.000.00--1.00---------------------------------------------------
...............................................................................................................................................................................................................AGGAGGAAGAGCGAGAGAAGAAGTTCTCT..............291.000.00--1.00---------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTAAATAG..................................................271.000.00-1.00----------------------------------------------------
..............................................................................................................GCATGAACCACTGTGCCCAGCCGAC...................................................................................................................251.000.00--1.00---------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTCAGG......................................................221.000.00--1.00---------------------------------------------------
...................................................................................................................................................................................................................................AAGTTTTCTAGAAGGCTAAATC.2211.001.00----------------------1.00-------------------------------
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTATCG....................................................221.000.00-------1.00----------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTCACG......................................................231.000.00---1.00--------------------------------------------------
......................................TGGCCAGGCTGGTGTCGAACCCTG............................................................................................................................................................................................241.000.00--1.00---------------------------------------------------
..........................................................................................................ACAGGCATGAACCACTGTGCCCAGCCGAC...................................................................................................................291.000.00--1.00---------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTCGGA....................................................241.000.00----1.00-------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTATAG......................................................231.000.001.00-----------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTAATTTA..................................................261.000.00--1.00---------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTCTC.....................................................231.000.00---1.00--------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTAAGG......................................................231.000.00--1.00---------------------------------------------------
...........................................................................................................................................................................TGTACACTTTTTTTTTTTTTTTTGGC.....................................................261.000.00--1.00---------------------------------------------------
.................AGAGACAGGGTTTCACCATGTTGGCCAGCCCG.........................................................................................................................................................................................................321.000.00--1.00---------------------------------------------------
...................................TGTTGGCCAGGCTGGTGGGGA..................................................................................................................................................................................................211.000.00-----------1.00------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTGCG.....................................................241.000.00--1.00---------------------------------------------------
....................................................................................................................................................................................TTTTTTTTTTTTTTAATCAGATTTTG............................................261.000.001.00-----------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTCCGG....................................................241.000.00--1.00---------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTATT.......................................................221.000.00-1.00----------------------------------------------------
............................................................................................................................................................................GTACACTTTTTTTTTTTTTTTTTTTC....................................................261.000.00-1.00----------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTCTAG......................................................221.000.001.00-----------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTATTGG...................................................251.000.001.00-----------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTATAAC...................................................251.000.00-------1.00----------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTCTCG......................................................221.000.001.00-----------------------------------------------------
............................................................................................................................................................................................................CTAAGGAGGAAGAGCGAGA...........................1911.001.00------------------------1.00-----------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTAATTCTG.................................................271.000.00-1.00----------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTACTGG...................................................251.000.00---1.00--------------------------------------------------
.................................................................................................................................................................................CTTTTTTTTTTTTTTTTAATCAACTG...............................................261.000.00-1.00----------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTCAAG....................................................241.000.00---1.00--------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTAATCATAAG...............................................291.000.00-------1.00----------------------------------------------
...............................................................................................................................................................................................................AGGAGGAAGAGCGAGAGAAGAA.....................2211.001.00--------------------------------1.00---------------------
.TCTTTGTATTTTTAGTAGAGACAGGATCC............................................................................................................................................................................................................................291.000.00--1.00---------------------------------------------------
............................................................................................................................................................................................................CTAAGGAGGAAGAGCGAGGG..........................201.000.00-------------------1.00----------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTCTAG....................................................251.000.00-----1.00------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTAATTTTT.................................................271.000.001.00-----------------------------------------------------
.................................CATGTTGGCCAGGCTGGTGTAGGG.................................................................................................................................................................................................241.000.00-------------------------------1.00----------------------
..........................................................................................................ACAGGCATGAACCACTGTGCCCAGCCGATG..................................................................................................................301.000.00--1.00---------------------------------------------------
..............................................................GACTTCGTGAACCACCCGCCTCAGCCTCC...............................................................................................................................................................2911.001.00------------1.00-----------------------------------------
...................................TGTTGGCCAGGCTGGTGTCGAACCCTC............................................................................................................................................................................................271.000.00--1.00---------------------------------------------------
...........................................................................................................................................................................TGTACACTTTTTTTTTTTTTTTCTAG.....................................................261.000.00--1.00---------------------------------------------------
....................................................................................................................................................................................TTTTTTTTTTTTTTAATCAGCGTA..............................................241.000.00----1.00-------------------------------------------------
...............................................................................................................................................................................CACTTTTTTTTTTTTTTTTACAAG...................................................241.000.00-------1.00----------------------------------------------
............................................................................................................................................................................................................CTAAGGAGGAAGAGCGAGAGA.........................2111.001.00-----------1.00------------------------------------------
............................................................................................................................................................................................................CTAAGGAGGAAGAGCGAGAGAAGAAGTTTCCT..............321.000.00----1.00-------------------------------------------------
.................................................................................................................................................................................CTTTTTTTTTTTTTTTTAATCAG..................................................2381.001.000.250.25-0.25-0.25------------------------------------------------
..................................ATGTTGGCCAGGCTGGTGGAGT..................................................................................................................................................................................................221.000.00------------------------------1.00-----------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTCCG.....................................................241.000.00-----1.00------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTATTAT...................................................251.000.00---1.00--------------------------------------------------
.........................................................................................................................................................................................................TCACTAAGGAGGAAGAGCGAGAGAAG.......................2611.001.00----------------------------------------------1.00-------
.............................................................................................................................................................................................................TAAGGAGGAAGAGCGAGAGAAGA......................2311.001.00-------------------1.00----------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTATTTT...................................................251.000.001.00-----------------------------------------------------
...............................................................................................................................................................................................................AGGAGGAAGAGCGAGAGAAGAAGTTTTC...............2811.001.00----------1.00-------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTAATTA...................................................251.000.00--1.00---------------------------------------------------
...........................................................................................................................................................................TGTACACTTTTTTTTTTTTTTCTTG......................................................251.000.00--1.00---------------------------------------------------
..............................................................................................................................................................................ACACTTTTTTTTTTTTTTTTCCAG....................................................241.000.00----1.00-------------------------------------------------
...............................................................................................................................................................................CACTTTTTTTTTTTTTTTTAATCAG..................................................2511.001.001.00-----------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTCTC.......................................................221.000.00-------1.00----------------------------------------------
...........................................................................................................................................................................................................ACTAAGGAGGAAGAGCGAGAGAAGAAGTCTTC...............321.000.00----1.00-------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTAAT.....................................................2440.750.75-0.50---0.25------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTAATATG..................................................2740.750.750.500.25----------------------------------------------------
...............................................................................................................................................................................................................AGGAGGAAGAGCGAGAGAA........................1930.670.67-------------------------------------------------0.330.33---
..............................................................................................................................................................................................................AAGGAGGAAGAGCGAGAGAAGA......................2220.500.50-----------------------------------------------0.50------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTAATAG...................................................2640.500.750.250.25----------------------------------------------------
...............................................................................................................................................................................................................AGGAGGAAGAGCGAGAGAAG.......................2030.330.33----------------------------------------------------0.33-
..............................................................................................................................................................................................................AAGGAGGAAGAGCGAGAGAA........................2030.330.33---------------------------------------------------0.33--
..............................................................................................................................................................................................................AAGGAGGAAGAGCGAGAG..........................1830.330.33------------------------------------------------0.33-----
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTAATCACTTT...............................................2740.253.000.25-----------------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTAATTTG..................................................2740.250.75-0.25----------------------------------------------------
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTAATCACA.................................................2540.253.000.25-----------------------------------------------------
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTAATCATTTG...............................................2740.253.000.25-----------------------------------------------------
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTAATCATCC................................................2640.253.00-------0.25----------------------------------------------
.............................................................................................................................................................................TACACTTTTTTTTTTTTTTTTAATAT...................................................2640.250.75-----0.25------------------------------------------------
................................................................................................................................................................................ACTTTTTTTTTTTTTTTTAATCACCCG...............................................2740.253.00-----0.25------------------------------------------------

Antisense strand
ATCTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTGTCGAACTTCCGACTTCGTGAACCACCCGCCTCAGCCTCCCAAAGTGCTGGCATTACAGGCATGAACCACTGTGCCCAGCCCTATCTAAGGCTATTTAACAGTGGAATAATTACTAAACTTGTACACTTTTTTTTTTTTTTTTAATCAGATCACTAAGGAGGAAGAGCGAGAGAAGAAGTTTTCTAGAAGGCTAAATCA
....................................................................(((.((.....((((((((((.....)).)))).......)))).....(((((((....((((........)))).....)))))))................)).)))........................................................................
..................................................................67...................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR343334SRR037936(GSM510474)
293cand1. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
TAX577590(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR343335SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
...........................................................................ACCCGCCTCAGCCTCCCAATTT......................................................................................................................................................... 228.000.00--------8.00---------------------------------------------
....................................................TCGAACTTCCGACTTAGAC................................................................................................................................................................................... 196.000.00--------------------2.00--1.00-1.00---------1.00--------1.00---------
....................................................TCGAACTTCCGACTTAG..................................................................................................................................................................................... 172.000.00----------------2.00-------------------------------------
...............................................................................................................................................................................................................AAAACTTCTTCTCTCGCTCTTCCTCCT................ 2712.002.00--------------2.00---------------------------------------
....................................GTTGGCCAGGCTGGTGTCGACGTG.............................................................................................................................................................................................. 242.000.00--1.00-1.00-------------------------------------------------
...........................................................................................................................................................................................................................GAGAGAAGAAGTTTTCTTG............ 191.000.00----------1.00-------------------------------------------
..............................................................................CGCCTCAGCCTCCCAAAGTGCTGGCCGC................................................................................................................................................ 281.000.00---------1.00--------------------------------------------
.......................................................................AACCACCCGCCTCAGCCTCCCAGA........................................................................................................................................................... 241.000.00----1.00-------------------------------------------------
......................................................................................CCTCCCAAAGTGCTGGCATTACAGGACC........................................................................................................................................ 281.000.00---------1.00--------------------------------------------
...........................................................................ACCCGCCTCAGCCTCCCTGTG.......................................................................................................................................................... 211.000.00----1.00-------------------------------------------------
......................................TGGCCAGGCTGGTGTCGATTT............................................................................................................................................................................................... 211.000.00---------------------------1.00--------------------------
....................................................TCGAACTTCCGACTTCGTA................................................................................................................................................................................... 191.000.00---------------1.00--------------------------------------
...................................................GTCGAACTTCCGACTGAC..................................................................................................................................................................................... 181.000.00-----------------------------1.00------------------------
.........................................................................CCACCCGCCTCAGCCTCCCAACTA......................................................................................................................................................... 241.000.00---------------------------------------1.00--------------
......................................................................GAACCACCCGCCTCAGCCTCCCAC............................................................................................................................................................ 241.000.00----1.00-------------------------------------------------
....................................GTTGGCCAGGCTGGTGTCGAAGGCG............................................................................................................................................................................................. 251.000.00----1.00-------------------------------------------------
....................................................................................AATGCCAGCACTTTGGGAGGCT................................................................................................................................................ 2201.001.00-------------------------------------------1.00----------
........................................................................ACCACCCGCCTCAGCCCTC............................................................................................................................................................... 191.000.00----------------------------------1.00-------------------
.......................................................................AACCACCCGCCTCAGCCTCCCATTAG......................................................................................................................................................... 261.000.00----1.00-------------------------------------------------
..CTTTGTATTTTTAGTAGAGACAGGGCTGA........................................................................................................................................................................................................................... 291.000.00---------1.00--------------------------------------------
.........................................................................CCACCCGCCTCAGCCTCCCAAAGTCCG...................................................................................................................................................... 271.000.00----1.00-------------------------------------------------
....................................................TCGAACTTCCGACTTAGA.................................................................................................................................................................................... 181.000.00----------------------------1.00-------------------------
.....................................................................TGAACCACCCGCCTCAGCCTCCCAGCT.......................................................................................................................................................... 271.000.00--1.00---------------------------------------------------
.........................................................................CCACCCGCCTCAGCCTCCCCGGC.......................................................................................................................................................... 231.000.00----1.00-------------------------------------------------
.....................................................................................TCATGCCTGTAATGCCAGCACTTTGGGAGGC...................................................................................................................................... 3101.001.00------------------1.00-----------------------------------
...........................................................................................................................TGCCCAGCCCTATCTAAAGA........................................................................................................... 201.000.00---------------------------------1.00--------------------
........................................................................ACCACCCGCCTCAGCCTCCCAAAT.......................................................................................................................................................... 241.000.00-------------------------------------1.00----------------
....................................................TCGAACTTCCGACTTA...................................................................................................................................................................................... 161.000.00---------------1.00--------------------------------------
.......................................................................AACCACCCGCCTCAGCCTCCCAATATT........................................................................................................................................................ 271.000.00--1.00---------------------------------------------------
.........................................TCGACACCAGCCTGG.................................................................................................................................................................................................. 1501.001.00--------------------------1.00---------------------------
....................................GTTGGCCAGGCTGGTGTCGAGGTG.............................................................................................................................................................................................. 241.000.00--1.00---------------------------------------------------
...........................................................................ACCCGCCTCAGCCTCCCAATTAG........................................................................................................................................................ 231.000.00-----------1.00------------------------------------------
.....................................................................................................................................................................................CTGATTAAAAAAAAAAAAA.................................................. 1901.001.00------------------1.00-----------------------------------
....................................................................................................................................................................................................................CTTCTCTCGCTCTTC....................... 1590.110.11-----------------------------------------------------0.11