| (3) B-CELL | (4) CELL-LINE | (1) CERVIX | (1) HELA | (3) LIVER | (1) OTHER | (1) TESTES |
| AGATGGAAGAAGAATTTAGGTCTCCAGTGAGATGTATTGCAACAACTAGAGTAGGTTTTGCTTTGTTTTGTTTTGTTTTAAATTTGGTGTGTATCATTGCGTGTTCTTTTTTAGTAATAGATTTAAACAAATTTTAATCACTAAGTCAACATAATTATTTTTTAACCAAATACCGTATTTATTGAAAAAGTATAAAGGGCTTTTATATTATGAACTAGTCGTTACTTCTCACTGTTATGTGTTCTGTGTC .....................................................((((....(((((((...(((((((((((...((..((((....))))..))....))))).))))))...)))))))....))))............................................................................................................... ..................................................51....................................................................................................................169............................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR343335 | SRR343334 | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | SRR040011(GSM532896) G529T. (cervix) | SRR189782 | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR553576(SRX182782) source: Testis. (testes) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR033723(GSM497068) L1236 cell line (L1236). (B cell) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR037933(GSM510471) 293cand4_rep2. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTCC.......................................................................................................................................................................... | 25 | 44.00 | 0.00 | 22.00 | 22.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTCC.......................................................................................................................................................................... | 24 | 16.00 | 0.00 | 8.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTCACC.......................................................................................................................................................................... | 25 | 5.00 | 0.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTCG.......................................................................................................................................................................... | 25 | 4.00 | 0.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..ATGGAAGAAGAATTTAGGTC.................................................................................................................................................................................................................................... | 20 | 1 | 4.00 | 4.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................AGGTTTTGCTTTGTTTTGGC.................................................................................................................................................................................. | 20 | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGGC............................................................................................................................................................................. | 22 | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................TAATTATTTTTTAACCTTC................................................................................ | 19 | 3.00 | 0.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTGCCC........................................................................................................................................................................ | 26 | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTCGC......................................................................................................................................................................... | 26 | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTAC.......................................................................................................................................................................... | 25 | 3.00 | 0.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGGC............................................................................................................................................................................. | 21 | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................GTTTTGCTTTGTTTTGTTTTGTCACC.......................................................................................................................................................................... | 26 | 3.00 | 0.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTCCC......................................................................................................................................................................... | 26 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTTCGAG....................................................................................................................................................................... | 27 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTCTG......................................................................................................................................................................... | 26 | 2.00 | 0.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................GTTTTGCTTTGTTTTGTTTTGTTTTTGG........................................................................................................................................................................ | 28 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................AGTAGGTTTTGCTTTGTTTTGTTTTGTTTC........................................................................................................................................................................... | 30 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTCTCC.......................................................................................................................................................................... | 24 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTCCA......................................................................................................................................................................... | 26 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTGCC......................................................................................................................................................................... | 26 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AGGTTTTGCTTTGTTTTGTTTTGTTTTA.......................................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTGGAG........................................................................................................................................................................ | 27 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AGGTTTTGCTTTGTTTTGTTTTGTTTGAG......................................................................................................................................................................... | 29 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTGTG........................................................................................................................................................................... | 24 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTCTCC.......................................................................................................................................................................... | 25 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTGG............................................................................................................................................................................ | 22 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................ATGTATTGCAACAACTAGACT...................................................................................................................................................................................................... | 21 | 2.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | |
| .......................................................................................................................................................TAATTATTTTTTAACCTTCC............................................................................... | 20 | 2.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTCTCG............................................................................................................................................................................. | 22 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................GTTTTGCTTTGTTTTGTTTTGGC............................................................................................................................................................................. | 23 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTCCCC........................................................................................................................................................................ | 27 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................TTGCTTTGTTTTGTTTTGTTTAGTT........................................................................................................................................................................ | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................TTGCTTTGTTTTGTTTTGTTTTCGG........................................................................................................................................................................ | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................GTTTTGCTTTGTTTTGTTTTGTAG............................................................................................................................................................................ | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AGGTTTTGCTTTGTTTTGTTTTGGC............................................................................................................................................................................. | 25 | 3 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTACA......................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTCCTT........................................................................................................................................................................ | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTTCCTC....................................................................................................................................................................... | 27 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTCTTG.......................................................................................................................................................................... | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTCGC......................................................................................................................................................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................TTGCTTTGTTTTGTTTTGTTTAG.......................................................................................................................................................................... | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTCAGT........................................................................................................................................................................ | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTTCTCT....................................................................................................................................................................... | 28 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................GCTTTGTTTTGTTTTGTTTTCGTT....................................................................................................................................................................... | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AGGTTTTGCTTTGTTTTGTTTTGTTTC........................................................................................................................................................................... | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTGGA......................................................................................................................................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGGTCG........................................................................................................................................................................... | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTGGC......................................................................................................................................................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AGGTTTTGCTTTGTTTTGTTTTGTTTTGGA........................................................................................................................................................................ | 30 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTCAC........................................................................................................................................................................... | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................GTTTTGCTTTGTTTTGTTTTGTTTGG.......................................................................................................................................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................GTTTTGCTTTGTTTTGTTTTGTCTTG.......................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................AGGTCTCCAGTGAGATGTATTGCAACAACTAGA........................................................................................................................................................................................................ | 33 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................TTGCTTTGTTTTGTTTTGTTTCGG......................................................................................................................................................................... | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................TTGCTTTGTTTTGTTTTGTTTCGTT........................................................................................................................................................................ | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AGGTTTTGCTTTGTTTTGTTTTG............................................................................................................................................................................... | 23 | 3 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................AGATGTATTGCAACAACTAGA........................................................................................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .......................................................TTTTGCTTTGTTTTGTTTTGGTTG........................................................................................................................................................................... | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AGGTTTTGCTTTGTTTTGTTTTCTG............................................................................................................................................................................. | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTCGT......................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTCAG......................................................................................................................................................................... | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AGGTTTTGCTTTGTTTTGTTTTGTTTTGGC........................................................................................................................................................................ | 30 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTATTG........................................................................................................................................................................ | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AGGTTTTGCTTTGTTTTGTTTTGTT............................................................................................................................................................................. | 25 | 3 | 1.00 | 1.00 | 0.33 | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TTGCTTTGTTTTGTTTTGTCACC.......................................................................................................................................................................... | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTCACC.......................................................................................................................................................................... | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTTCTCC....................................................................................................................................................................... | 28 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTCGGT............................................................................................................................................................................. | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTGGG........................................................................................................................................................................... | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AGGTTTTGCTTTGTTTTGTTTTGTTTTTACT....................................................................................................................................................................... | 31 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTTCTAG....................................................................................................................................................................... | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................TTGCTTTGTTTTGTTTTGTTTTACTC....................................................................................................................................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................GTTTTGCTTTGTTTTGTTTTGTTTTTCG........................................................................................................................................................................ | 28 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................TTGCTTTGTTTTGTTTTGTTTAGG......................................................................................................................................................................... | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................GTTTTGCTTTGTTTTGTTTTCTCC............................................................................................................................................................................ | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AGGTTTTGCTTTGTTTTGTTGTTG.............................................................................................................................................................................. | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTCGAC............................................................................................................................................................................. | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTGTTG.......................................................................................................................................................................... | 25 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTCGG............................................................................................................................................................................. | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTTCG......................................................................................................................................................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................TTGCTTTGTTTTGTTTTGTTTTAACCCC..................................................................................................................................................................... | 28 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTCGG.............................................................................................................................................................................. | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTTCGG........................................................................................................................................................................ | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTGGAC........................................................................................................................................................................ | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTCTGG........................................................................................................................................................................ | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTCACA.......................................................................................................................................................................... | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................AATTATTTTTTAACCGTCC............................................................................... | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AGGTTTTGCTTTGTTATTT................................................................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................TGCTTTGTTTTGTTTTGTTTTCTTG....................................................................................................................................................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTAGCG........................................................................................................................................................................ | 27 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................TTGCTTTGTTTTGTTTTGTTTGCCC........................................................................................................................................................................ | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................TGCTTTGTTTTGTTTTGTTTCGC......................................................................................................................................................................... | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGGTTA........................................................................................................................................................................... | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................GTTTTGCTTTGTTTTGTTTTGTTTTTCTC....................................................................................................................................................................... | 29 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................CAGTGAGATGTATTGCAACAACT........................................................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................TGCTTTGTTTTGTTTTGTTTTCGAG....................................................................................................................................................................... | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................TTGCTTTGTTTTGTTTTGTTTTCTTG....................................................................................................................................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................CTTTGTTTTGTTTTGTACG........................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTTCGAG....................................................................................................................................................................... | 28 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AGGTTTTGCTTTGTTTTGTTTTGTCTT........................................................................................................................................................................... | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................TGCTTTGTTTTGTTTTGTTTGGAC........................................................................................................................................................................ | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AGGTTTTGCTTTGTTTTGGCT................................................................................................................................................................................. | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................GTTTTGCTTTGTTTTGTTTTGTTTTTTC........................................................................................................................................................................ | 28 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................TGCTTTGTTTTGTTTTGTTTTCCCC....................................................................................................................................................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTCGGC........................................................................................................................................................................ | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AGGTTTTGCTTTGTTTTGTTTTGTTTGA.......................................................................................................................................................................... | 28 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTCTTG.......................................................................................................................................................................... | 25 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTGC.......................................................................................................................................................................... | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTTCTTG....................................................................................................................................................................... | 27 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTGTTTAGA......................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTCCGG........................................................................................................................................................................ | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................TTTGTTTTAAATTTGCCCC................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................GTTTTGCTTTGTTTTGTTTTGTTTTCTT........................................................................................................................................................................ | 28 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTTAAAG....................................................................................................................................................................... | 27 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................TGCTTTGTTTTGTTTTGTTTTACCCG...................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTAGA......................................................................................................................................................................... | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................TTTTGCTTTGTTTTGTTTTCCGG............................................................................................................................................................................ | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................GTTTTGCTTTGTTTTGTTTTGTTTTTCT........................................................................................................................................................................ | 28 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................ATTATTTTTTAACCAAATCAGT........................................................................... | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................TTTGCTTTGTTTTGTTTTGTTTAG.......................................................................................................................................................................... | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AGGTTTTGCTTTGTTTTGTTTTGTTTGTT......................................................................................................................................................................... | 29 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................TAGGTTTTGCTTTGTTTTGT................................................................................................................................................................................... | 20 | 3 | 0.33 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................AGGTTTTGCTTTGTTTTGTTTTGTTCTA.......................................................................................................................................................................... | 28 | 3 | 0.33 | 1.00 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................AGGTTTTGCTTTGTTTTGTTT................................................................................................................................................................................. | 21 | 8 | 0.12 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AGATGGAAGAAGAATTTAGGTCTCCAGTGAGATGTATTGCAACAACTAGAGTAGGTTTTGCTTTGTTTTGTTTTGTTTTAAATTTGGTGTGTATCATTGCGTGTTCTTTTTTAGTAATAGATTTAAACAAATTTTAATCACTAAGTCAACATAATTATTTTTTAACCAAATACCGTATTTATTGAAAAAGTATAAAGGGCTTTTATATTATGAACTAGTCGTTACTTCTCACTGTTATGTGTTCTGTGTC .....................................................((((....(((((((...(((((((((((...((..((((....))))..))....))))).))))))...)))))))....))))............................................................................................................... ..................................................51....................................................................................................................169............................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR343335 | SRR343334 | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | SRR040011(GSM532896) G529T. (cervix) | SRR189782 | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR033713(GSM497058) Burkitt Lymphoma (BL115). (B cell) | SRR553576(SRX182782) source: Testis. (testes) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR033723(GSM497068) L1236 cell line (L1236). (B cell) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR037933(GSM510471) 293cand4_rep2. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................TTTTTTAGTAATAGATAAAG............................................................................................................................ | 20 | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................GTTTTGTTTTAAATTTGGG.................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................GTTTTGTTTTAAATTTGG................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................TTGAAAAAGTATAAACTG................................................... | 18 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................TCAACATAATTATTTAAAG...................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |