ID: uc001vee.1_intron_1_0_chr13_50657331_f.5p
GENE: DLEU1(2)
chr13:50657281-50657530+


(1)
AGO1.ip
(4)
AGO2.ip
(4)
B-CELL
(2)
BRAIN
(5)
BREAST
(25)
CELL-LINE
(2)
CERVIX
(1)
HEART
(2)
HELA
(4)
LIVER
(2)
OTHER
(11)
SKIN
(1)
XRN.ip

Sense strand
AGGACACCTGAGGTTCAGATTAAGAAATCTGCCCCAAAGTCTTAGAACTGGTAAGTAGAAGCACCATATCTAGGCAAACCTGTCTACCTTCAAAAAAAATGGGCACTCTGATAGGACAATTAACGATAATAAAGTTGTAATTTTTTTTTTTTTTTGAGACGGAGCCTCGCTCTGTCGCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAGCCTCCGCCTCCCGGGTTCAAGCAATTCTCCTGC
.............................................................................................................................................................((((((((...))))))))((((.((......))..)))).....................................................
...............................................................................................................................128.....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189787SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343334DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
GSM532874(GSM532874)
G699T. (cervix)
TAX577740(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR040039(GSM532924)
G531T. (cervix)
SRR038854(GSM458537)
MM653. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR038860(GSM458543)
MM426. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...................................................................................................................................................................................................GCGCGATCTCGGCTCACTGCAT.................................2217.000.00--7.004.00--3.001.00-1.00------1.00---------------------------------------------
............................................................................................................................................................................................TGCAGTGGCGCGATCTCGGCTAT.......................................237.000.00--1.00-3.00--------2.00-------------------------------------------1.00----
...................................................................................................................................................................................................GCGCGATCTCGGCTCACTGCATAA...............................245.000.00----3.00---------1.00-----------------------------1.00-----------------
...................................................................................................................................................................................................GCGCGATCTCGGCTCACTGCAG.................................2203.003.00---1.00-----1.00-------------1.00--------------------------------------
...................................................................................................................................................................................................GCGCGATCTCGGCTCACTGCAGAAT..............................2503.003.00-----3.00--------------------------------------------------------
...........................................................................................................................................................................................................TCGGCTCACTGCAGCCTCCGCCTCCCGGGTCC...............323.000.00-3.00------------------------------------------------------------
....................................................................................................................................................................................................CGCGATCTCGGCTCACTGCAGAAT..............................243.000.00---------------2.00------------------------------------------1.00---
...................................................................................................................................................................................................GCGCGATCTCGGCTCACTGCATAAT..............................253.000.00----3.00---------------------------------------------------------
...........................................................................................................................................................................................................TCGGCTCACTGCAGCCTCCGCCTCCCGGGCGC...............322.000.00-2.00------------------------------------------------------------
............................................................................................................................................................................................TGCAGTGGCGCGATCTCGGCTAGA......................................242.000.00--------1.00--------------------1.00--------------------------------
......................................................................................................................................................................................................................CAGCCTCCGCCTCCCGGGTCCAG.............232.000.00-2.00------------------------------------------------------------
..................................................................................................................................................................AGCCTCGCTCTGTCGCCAGGCTGGAGTGCGC.........................................................312.000.00-2.00------------------------------------------------------------
........................................................................................................................................................................................................ATCTCGGCTCACTGCAGCCTCCGCCCCTG.....................292.000.001.001.00------------------------------------------------------------
..................................................................................................................................................................................................................ACTGCAGCCTCCGCCTCCCGGGCC................242.000.001.001.00------------------------------------------------------------
..........................................................................................................................................AATTTTTTTTTTTTTTTGAGACGGAGCCCTAC................................................................................322.000.002.00-------------------------------------------------------------
..................................................................................................................................................TTTTTTTTTGAGACGGAGCCTCGGGC..............................................................................261.000.001.00-------------------------------------------------------------
............................................................................................................................................................................................TGCAGTGGCGCGATCTCGGCTAGAA.....................................251.000.00----------------------1.00---------------------------------------
......................................................................................................................................................................TCGCTCTGTCGCCAGGCTGGAGTGCAGTCCC.....................................................311.000.00-1.00------------------------------------------------------------
....................................................................................................................................AGTTGTAATTTTTTTTTTGTT.................................................................................................211.000.00----------------------------------------1.00---------------------
.................................................................................................................................................................................................TGGCGCGATCTCGGCTCACTGCAGCCTA.............................281.000.00-1.00------------------------------------------------------------
.....................................................................................................................................................................................................GCGATCTCGGCTCACTGCAGA................................211.000.00--1.00-----------------------------------------------------------
...........................................................................................................................................ATTTTTTTTTTTTTTTGAGACGGATTT....................................................................................271.000.001.00-------------------------------------------------------------
.....................................................................................................................................................TTTTTTGAGACGGAGCCTCGCTCTGTCGCTC......................................................................311.000.00-1.00------------------------------------------------------------
..................................................................................................................................................................................................................ACTGCAGCCTCCGCCTCCCGGGTTCGGGC...........291.000.00-1.00------------------------------------------------------------
..................................................................................................................................................................................................................ACTGCAGCCTCCGCCTCCCGGGCCC...............251.000.00-1.00------------------------------------------------------------
................................................................................................................................................TTTTTTTTTTTGAGACGGAGCCCT..................................................................................241.000.00-1.00------------------------------------------------------------
........................................................................................................................................................................................................ATCTCGGCTCACTGCAGCCTCCCGCG........................261.000.00-1.00------------------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTTTGAGACGGAGCCCGG.................................................................................271.000.00-1.00------------------------------------------------------------
.........................................................................................................................................................................CTCTGTCGCCAGGCTGGAGTGCTCTG.......................................................261.000.00-----------------------------------------------------------1.00--
..............................................................................................................................................TTTTTTTTTTTTTGAGACGGAGCCCCT.................................................................................271.000.001.00-------------------------------------------------------------
.....................................................................................................................................GTTGTAATTTTTTTTTGTTC.................................................................................................201.000.00----------1.00---------------------------------------------------
.......................................................................................................................................................TTTTGAGACGGAGCCTCGCGCCG............................................................................231.000.00-1.00------------------------------------------------------------
......................................................................................................................................................................TCGCTCTGTCGCCAGGCTGGCGCG............................................................241.000.00--------------------------1.00-----------------------------------
..................................................................................................................................................................................................................ACTGCAGCCTCCGCCCATG.....................191.000.001.00-------------------------------------------------------------
...................................................................................................................................................TTTTTTTTGAGACGGAGCCACGC................................................................................231.000.00-1.00------------------------------------------------------------
..............................................................................................................................................................................................................GCTCACTGCAGCCTCCGCCTCCCGGGAC................281.000.001.00-------------------------------------------------------------
............................................................................................................................................................................TGTCGCCAGGCTGGAGTGCAGTGGCGGTG.................................................291.000.00-1.00------------------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTTTGAGACGGAGCCGTGC................................................................................281.000.001.00-------------------------------------------------------------
.........................................................................................................................................................................................................TCTCGGCTCACTGCAGCCTCCGCCTGGGC....................291.000.00-1.00------------------------------------------------------------
....................................................................................................................................................................................................CGCGATCTCGGCTCACTGCATAGA..............................241.000.00------------------1.00-------------------------------------------
...........................................................................................................................................................................................................TCGGCTCACTGCAGCCTCCGCCTGGCG....................271.000.00-1.00------------------------------------------------------------
................................................................................................................................................TTTTTTTTTTTGAGACGGAGCCTCCCC...............................................................................271.000.001.00-------------------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTTTGAGACGGAGCAG...................................................................................251.000.001.00-------------------------------------------------------------
..........................................................................................................................................AATTTTTTTTTTTTTTTGAGACGGAGCCTCGC................................................................................3211.001.00-1.00------------------------------------------------------------
...................................................................................................................................................................................................GCGCGATCTCGGCTCACTGCATAAA..............................251.000.00--------------1.00-----------------------------------------------
................................................................................................................................................................................................................TCACTGCAGCCTCCGCCTCCCGGCC.................251.000.00-1.00------------------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTTTGAGACGGAGCCTAC.................................................................................271.000.001.00-------------------------------------------------------------
..........................................................................................................................................AATTTTTTTTTTTTTTTGAGACGGCC......................................................................................261.000.00-1.00------------------------------------------------------------
....................................................................................................................................AGTTGTAATTTTTTTTGATC..................................................................................................201.000.00----------1.00---------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTTTGAGACGGAGCCCTG.................................................................................281.000.001.00-------------------------------------------------------------
................................................................................................................................................................................................................TCACTGCAGCCTCCGCCTCCCGGGGC................261.000.00-1.00------------------------------------------------------------
...............................................................................................................................................................................................AGTGGCGCGATCTCGGCTCAAATA...................................241.000.00--------------------------------1.00-----------------------------
.........................................................................................................................................................................................................TCTCGGCTCACTGCAGCCTCCGCCTCCCCTGC.................321.000.00-1.00------------------------------------------------------------
..........................................................................................................................................................................................AGTGCAGTGGCGCGATCTCGGCTCACTGGCTC................................321.000.00-1.00------------------------------------------------------------
.....................................................................................................................................................TTTTTTGAGACGGAGCCTAT.................................................................................201.000.00------------------------------------------------1.00-------------
..............................................................................................................................................................................................................GCTCACTGCAGCCTCCGCCTCCCGGGCGC...............291.000.00-1.00------------------------------------------------------------
...............................................................................................................................................................................CGCCAGGCTGGAGTGCAGTGTGGG...................................................241.000.00-------------------------------------------------------1.00------
...............................................................................................................................................................................................................CTCACTGCAGCCTCCGCCTCCCGGGTCCAG.............301.000.00-1.00------------------------------------------------------------
...............................................................................................................................................................................................AGTGGCGCGATCTCGGCTCACTGCAGCCACG............................311.000.00-1.00------------------------------------------------------------
........................................................................................................................................................................................................................GCCTCCGCCTCCCGGGTTCGGT............221.000.00--------------------------------------------------1.00-----------
...........................................................................................................................................................................................................TCGGCTCACTGCAGCCTCCGCCTGGG.....................261.000.00-1.00------------------------------------------------------------
............................................................................................................................................................................TGTCGCCAGGCTGGAGTGCAGGCAG.....................................................251.000.00-1.00------------------------------------------------------------
........................................................................................................................................................................................................ATCTCGGCTCACTGCAGCCTCCGCCTCCGACG..................321.000.001.00-------------------------------------------------------------
............................................................................................................................................................................TGTCGCCAGGCTGGAGTGCAGTGGCGGCC.................................................291.000.00-1.00------------------------------------------------------------
.......................................................................................................................................................TTTTGAGACGGAGCCTCGCTCTAA...........................................................................241.000.00-----------------------------------------------------1.00--------
...................................................................................................................................................................................................GCGCGATCTCGGCTCACTGCAGCCGAA............................271.000.001.00-------------------------------------------------------------
..................................................................................................................................................................................................................ACTGCAGCCTCCGCCTCCCGGCCTC...............251.000.00-1.00------------------------------------------------------------
........................................................................................................................................................................................................ATCTCGGCTCACTGCAGCCTCCGCCTCCGGGC..................321.000.00-1.00------------------------------------------------------------
................................................................................................................................................TTTTTTTTTTTGAGACGGAGCCACCC................................................................................261.000.001.00-------------------------------------------------------------
........................................................................................................................................................................................................ATCTCGGCTCACTGCAGCCTCCGCCGGGG.....................291.000.00-1.00------------------------------------------------------------
..................................................................................................................................................................................................................ACTGCAGCCTCCGCCTCCCGGGTCCAG.............271.000.00-1.00------------------------------------------------------------
..............................................................................................................................................TTTTTTTTTTTTTGAGACGGAGCCCTG.................................................................................271.000.001.00-------------------------------------------------------------
................................................................................................................................................................................................................TCACTGCAGCCTCCGCCCCAG.....................211.000.001.00-------------------------------------------------------------
.....................................................................................................................................................TTTTTTGAGACGGAGCCTCGCCGTG............................................................................251.000.001.00-------------------------------------------------------------
....................................................................................................................................................................................................CGCGATCTCGGCTCACTGCAGCCTGC............................261.000.001.00-------------------------------------------------------------
.....................................................................................................................................................................................GCTGGAGTGCAGTGGCGCGATA...............................................221.000.00------------------------------------1.00-------------------------
........................................................................................................................................................TTTGAGACGGAGCCTCGCTCGG............................................................................221.000.00-1.00------------------------------------------------------------
............................................................................................................................................................AGACGGAGCCTCGCTCTGTCGCCAGGCTGCAG..............................................................321.000.00-1.00------------------------------------------------------------
................................................................................................................................................................................................................TCACTGCAGCCTCCGCCTCCCGGGCCC...............271.000.00-1.00------------------------------------------------------------
...................................................................................................................................................TTTTTTTTGAGACGGAGCCCTAC................................................................................231.000.00-1.00------------------------------------------------------------
..............................................................................................AAAAATGGGCACTCTGATAGGAC.....................................................................................................................................2321.001.00-----------1.00--------------------------------------------------
.....................................AGTCTTAGAACTGGTGC....................................................................................................................................................................................................171.000.00-------------------------------------------1.00------------------
..................................................................................................................................................................................................................ACTGCAGCCTCCGCCTGGGC....................201.000.00-1.00------------------------------------------------------------
..........................................................................................................................................AATTTTTTTTTTTTTTTGAGCGGG........................................................................................241.000.00-1.00------------------------------------------------------------
....................................................................................................................................................................................................CGCGATCTCGGCTCACTGCAT.................................211.000.00--1.00-----------------------------------------------------------
.............................................................................................................................................................................................GCAGTGGCGCGATCTCGGCTAAAG.....................................241.000.00---------------------------1.00----------------------------------
.............................................................................................................................................................................................GCAGTGGCGCGATCTCGGCTCAAAT....................................251.000.00-----------------1.00--------------------------------------------
............................................................................................................................................................AGACGGAGCCTCGCTCTGTCGCCGG.....................................................................251.000.00-1.00------------------------------------------------------------
...................................................................................................................................................................................................GCGCGATCTCGGCTCACTGCAGCCGAC............................271.000.001.00-------------------------------------------------------------
................................................................................................................................................TTTTTTTTTTTGAGACGGAGCCCCAG................................................................................261.000.00--------------------1.00-----------------------------------------
....................................................................................................................................AGTTGTAATTTTTTTTTTTCTC................................................................................................221.000.00----------1.00---------------------------------------------------
.............................................................................................................................................................................................GCAGTGGCGCGATCTCGGCTAGA......................................231.000.00---------------------------------------1.00----------------------
....................................................................................................................................AGTTGTAATTTTTTTTGTTC..................................................................................................201.000.00----------1.00---------------------------------------------------
........................................................................................................................................................................................................ATCTCGGCTCACTGCAGCCTCCGGGCT.......................271.000.00-1.00------------------------------------------------------------
..................ATTAAGAAATCTGCCCCAAAG...................................................................................................................................................................................................................2111.001.00---------------------------------------------1.00----------------
........................................................................................................................................................................GCTCTGTCGCCAGGCTGGAGTGCAGAA.......................................................271.000.00-----------------------------------------1.00--------------------
....................................................................................................................................AGTTGTAATTTTTTTTTTGTTC................................................................................................221.000.00------------------------------------------1.00-------------------
.............................................................................................................................................TTTTTTTTTTTTTTGAGACGGAGCCTCGGCC..............................................................................311.000.001.00-------------------------------------------------------------
...............................................................................................................................................TTTTTTTTTTTTGAGACGGAGCCCTGC................................................................................271.000.00-1.00------------------------------------------------------------
...........................................................................................................................................................................................GTGCAGTGGCGCGATCTCGGCTCACTCC...................................281.000.00---1.00----------------------------------------------------------
...............................................................................................................................................TTTTTTTTTTTTGAGACGGAGCCCTG.................................................................................261.000.001.00-------------------------------------------------------------
..........................................................................................................................................................................TCTGTCGCCAGGCTGGAGTGCAGGTGC.....................................................271.000.00-1.00------------------------------------------------------------
............................................................................................................................................................AGACGGAGCCTCGCTCGGCC..........................................................................201.000.001.00-------------------------------------------------------------
..........................................................................................................................................................TGAGACGGAGCCTCGCTCTGTCGCCAGGCAG.................................................................311.000.00-1.00------------------------------------------------------------
........................................................................................................................................................................................................ATCTCGGCTCACTGCAGCCTCCGGGGC.......................271.000.00-1.00------------------------------------------------------------
....................................................................................................................................................................................................CGCGATCTCGGCTCACTGCATTTT..............................241.000.00-----------------1.00--------------------------------------------
........................................................................................................................................................................................................ATCTCGGCTCACTGCAGCCTCCGCCCTG......................281.000.00-1.00------------------------------------------------------------
................................................................................................................................................TTTTTTTTTTTGAGACGGAGCCGCTC................................................................................261.000.00-1.00------------------------------------------------------------
....................................................................................................................................................................................................................TGCAGCCTCCGCCTCCCGGGTCCAG.............251.000.00-1.00------------------------------------------------------------
...................................................................................................................................................................................................GCGCGATCTCGGCTCACTGCATAT...............................241.000.00---------1.00----------------------------------------------------
....................................................................................................................................................................................................CGCGATCTCGGCTCACTGCATTA...............................231.000.00--1.00-----------------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTTTGAGACGGAGCCCGGC................................................................................291.000.00-1.00------------------------------------------------------------
...............................................................................................................................................................................................................CTCACTGCAGCCTCCGCCTCCCGGGGC................271.000.001.00-------------------------------------------------------------
.....................................................................................................................................................................................GCTGGAGTGCAGTGGCGCGAA................................................211.000.00-------1.00------------------------------------------------------
..........................................................................................................................................AATTTTTTTTTTTTTTTGAGACCCCG......................................................................................261.000.00-1.00------------------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTTTGAGACGGAGCCCCGC................................................................................291.000.00-1.00------------------------------------------------------------
...................................................................................................................................................TTTTTTTTGAGACGGAGCCTCGCCCC.............................................................................261.000.00-------------------------------------------------------------1.00
........................................................................................................................................................................................................ATCTCGGCTCACTGCAGCCTCCGCCCCAG.....................291.000.00-1.00------------------------------------------------------------
..........................................TAGAACTGGTAAGTAGAAGCA...........................................................................................................................................................................................2111.001.00-------------------1.00------------------------------------------
...............................................................................................................................................TTTTTTTTTTTTGAGACGGAGCCTCGTCTT.............................................................................301.000.001.00-------------------------------------------------------------
.........................................................................................................................................................................................................TCTCGGCTCACTGCAGCCTCCGCCAGGG.....................281.000.00-1.00------------------------------------------------------------
............................................................................................................................................TTTTTTTTTTTTTTTGAGACGGAGCGGG..................................................................................281.000.001.00-------------------------------------------------------------
...............................................................................................................................................................................................AGTGGCGCGATCTCGGCTCAATT....................................231.000.00------------------------------------------------------1.00-------
..................................................................................................................................................................................................................ACTGCAGCCTCCGCCTCCCGGGAC................241.000.001.00-------------------------------------------------------------
..................................................................................................................................................TTTTTTTTTGAGACGGAGCCACCT................................................................................241.000.00-1.00------------------------------------------------------------
.................................................................................................................................................TTTTTTTTTTGAGACGGAGCCTCGCTCGG............................................................................291.000.00-1.00------------------------------------------------------------
...........................................................................................................................................ATTTTTTTTTTTTTTTGAGACGTGGG.....................................................................................261.000.001.00-------------------------------------------------------------
..................................................................................................................................................................................................................ACTGCAGCCTCCGCCTGGGG....................201.000.00-1.00------------------------------------------------------------
.....................................................................................................................................................TTTTTTGAGACGGAGCCTCGCGCC.............................................................................241.000.001.00-------------------------------------------------------------
.............................................................................................................................................TTTTTTTTTTTTTTGAGACGGAGCCCTGC................................................................................291.000.00-1.00------------------------------------------------------------
..................................................................................................................................................TTTTTTTTTGAGACGGAGCCTCGATC..............................................................................261.000.001.00-------------------------------------------------------------
........................................................................................................................................................TTTGAGACGGAGCCTCTCAT..............................................................................201.000.00---------------------1.00----------------------------------------
........................................................................................................................................................................................................ATCTCGGCTCACTGCAGCCTCCGCCTGGT.....................291.000.00-1.00------------------------------------------------------------
...................................................................................................................................................................................................GCGCGATCTCGGCTCACTGCAGATA..............................2501.003.00----1.00---------------------------------------------------------
.................................CCAAAGTCTTAGAACTGGTAAGTAGA...............................................................................................................................................................................................2611.001.00----------------------------1.00---------------------------------
................................................................................................................................................TTTTTTTTTTTGAGACGGAGCCTCGCTGCG............................................................................301.000.00-1.00------------------------------------------------------------
..........................................TAGAACTGGTAAGTAGAAGCAC..........................................................................................................................................................................................2211.001.00-------------------1.00------------------------------------------
...................................................................................................................................................................................................GCGCGATCTCGGCTCACTGGGGC................................231.000.00----------------1.00---------------------------------------------
........................................................................................................................................................................................................ATCTCGGCTCACTGCAGCCTCCGCCTGAGC....................301.000.00-1.00------------------------------------------------------------
........................................................................................................................................................................................................ATCTCGGCTCACTGCAGCCTCCGCGC........................261.000.00-1.00------------------------------------------------------------
.........................................................................................................................................TAATTTTTTTTTTTTTTTGAGACGGAGCC....................................................................................2940.500.500.50-------------------------------------------------------------

Antisense strand
AGGACACCTGAGGTTCAGATTAAGAAATCTGCCCCAAAGTCTTAGAACTGGTAAGTAGAAGCACCATATCTAGGCAAACCTGTCTACCTTCAAAAAAAATGGGCACTCTGATAGGACAATTAACGATAATAAAGTTGTAATTTTTTTTTTTTTTTGAGACGGAGCCTCGCTCTGTCGCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAGCCTCCGCCTCCCGGGTTCAAGCAATTCTCCTGC
.............................................................................................................................................................((((((((...))))))))((((.((......))..)))).....................................................
...............................................................................................................................128.....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189787SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343334DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
GSM532874(GSM532874)
G699T. (cervix)
TAX577740(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR040039(GSM532924)
G531T. (cervix)
SRR038854(GSM458537)
MM653. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR038860(GSM458543)
MM426. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
......................................................................................................................................................................................................................CAGCCTCCGCCTCCCGGGTTGAG............. 235.000.005.00-------------------------------------------------------------
.................................................................................................TTAATTGTCCTATCAGAGTGCCCATT............................................................................................................................... 2614.004.00-----4.00--------------------------------------------------------
.........................................................................................................................................................................................................................AGGAGAATTGCTTGAACCCGGGAGGCGGAGG.. 3104.004.00------1.002.00-1.00----------------------------------------------------
......................................................................................................................................................................................................................CAGCCTCCGCCTCCCGGGTTCAAGAG.......... 263.000.003.00-------------------------------------------------------------
.....................................................................................................................................................................................................................GCAGCCTCCGCCTCCCGGGTCGCG............. 242.000.002.00-------------------------------------------------------------
.....................................................................................................................................................................................................................GCAGCCTCCGCCTCCCGGGTCGGG............. 242.000.002.00-------------------------------------------------------------
..................................................................................................................................................................................................GGCGCGATCTCGGCTCACTGTA.................................. 222.000.00--------2.00-----------------------------------------------------
.......................................................................................................................................................................................................................AGCCTCCGCCTCCCGGGTTTCTG............ 232.000.002.00-------------------------------------------------------------
.............................................................................................................................................................................................................................AGGAGAATTGCTTGAACCCGGGAGGCG.. 2702.002.00------2.00-------------------------------------------------------
......................................................................................................................................................................................................................CAGCCTCCGCCTCCCGGGTTCAAGGG.......... 261.000.001.00-------------------------------------------------------------
.........................................................................................................................................................................................................................CCTCCGCCTCCCGGGTTCAAGCA.......... 231.000.00---1.00----------------------------------------------------------
......................................................................................................................................................................................................................CAGCCTCCGCCTCCCGGGTTCAGGG........... 251.000.001.00-------------------------------------------------------------
......................................................................................................................................................................................................................CAGCCTCCGCCTCCCGGGTTGCG............. 231.000.001.00-------------------------------------------------------------
...............................................................................................................................................................................................................CTCACTGCAGCCTCCGCAGAA...................... 211.000.00-----------1.00--------------------------------------------------
........................................................................................................................................................................................................................GCCTCCGCCTCCCGGGTTAGG............. 211.000.001.00-------------------------------------------------------------
............................................................................................................................................................AGACGGAGCCTCGCTCTGTAT......................................................................... 211.000.00----------1.00---------------------------------------------------
.....................................................................TTTTGAAGGTAGACAGGTTTGCCTAG........................................................................................................................................................... 2611.001.001.00-------------------------------------------------------------
.......................................................................................................................................................................................................................TGAACCCGGGAGGCGGAGGCT.............. 2101.001.00-------1.00------------------------------------------------------
......................................................................................................................................................................................................................CAGCCTCCGCCTCCCGGGTTCAAGCAATG....... 291.000.001.00-------------------------------------------------------------
...............................................................................................................................................................CGGAGCCTCGCTCTGTCGCCAGGCTGGAC.............................................................. 291.000.001.00-------------------------------------------------------------
...................................................................................................................................................................................................................CTGCAGCCTCCGCCTCCCGGGTTCGT............. 261.000.00------------1.00-------------------------------------------------
..........................................................................................................................................................................TCTGTCGCCAGGCTGGAGTGCAGTCGGC.................................................... 281.000.00-1.00------------------------------------------------------------
...............................................................................................................................................................................................................CTCACTGCAGCCTCCGCCAAAA..................... 221.000.00----------------------------------------------------1.00---------
..............................................................................................................................................................................................................GCTCACTGCAGCCTCCGCCTCCCGGGTTAAGG............ 321.000.00-1.00------------------------------------------------------------
.......................................................................................................................................................................................................................AGCCTCCGCCTCCCGGGTTCAAGCTCG........ 271.000.00------------------1.00-------------------------------------------
...............................................................................................................................AATAAAGTTGTAATTTCA......................................................................................................... 181.000.00--------------------1.00-----------------------------------------
........................................................................................................................................................................................................................GCCTCCGCCTCCCGGGTTCAAGCAATTCAC.... 301.000.00-1.00------------------------------------------------------------
.....................................................................................................................................................................................................................GCAGCCTCCGCCTCCCGGGTTCACC............ 251.000.001.00-------------------------------------------------------------
.............................................................................................................................................................................................................................GGAGAATTGCTTGAACCCGGGAGGCG... 2601.001.00--------------------------------------------------------1.00-----
........................................................................................................................................................................GCTCTGTCGCCAGGCTGGAGTGCAGTGGTAT................................................... 311.000.00-1.00------------------------------------------------------------
...................................................................................................................................................................................................................................CCGGGTTCAAGCAATTCTCCTTAGC 251.000.00--------1.00-----------------------------------------------------
............................................................................................................................................................................TGTCGCCAGGCTGGAGTGCAGTTG...................................................... 241.000.00-------------------------------1.00------------------------------
...................................................................................................................................................................................................................CTGCAGCCTCCGCCTCCCGGGTCGCG............. 261.000.00-1.00------------------------------------------------------------
...............................................................................................................................................................................................................CTCACTGCAGCCTCCGACCA....................... 201.000.00---------------------------------------------------1.00----------
.............................................................................................................................................................................................................GGCTCACTGCAGCCTCCGCCTCCCGGGTCCG.............. 311.000.001.00-------------------------------------------------------------
......................................................................................................................................................................................................................CAGCCTCCGCCTCCCGGGTTGGG............. 231.000.001.00-------------------------------------------------------------
.....................................................................................................TATTATCGTTAATTGTCCTATCAGAGTGCC....................................................................................................................... 3011.001.00------------------------------------------------------------1.00-
....................................................................................................................................................................................................................CCGGGAGGCGGAGGCTGCA................... 1901.001.00---1.00----------------------------------------------------------
.................................................................................................................................................................................................................CACTGCAGCCTCCGCCTGGA..................... 201.000.00-----------------------------------------------1.00--------------
......................................................................................................................................................................................................................CAGCCTCCGCCTCCCGGGTGAGG............. 231.000.001.00-------------------------------------------------------------
...................................................................................................................................................................................................................CTGCAGCCTCCGCCTCCCGGGTTAGG............. 261.000.001.00-------------------------------------------------------------
...................................................................................................................................................................................................................CTGCAGCCTCCGCCTCCCGGGTTCC.............. 251.000.001.00-------------------------------------------------------------
.......................................................................................................................................................................................................................AGCCTCCGCCTCCCGGGTTCT.............. 211.000.001.00-------------------------------------------------------------
............................................................................CATTTTTTTTGAAGGTAGACAGGTT..................................................................................................................................................... 2511.001.00-----------1.00--------------------------------------------------
...................................................................................................................................................................................................................CTGCAGCCTCCGCCTCCCGGGTCGG.............. 251.000.001.00-------------------------------------------------------------
..................................................................................................................................................................................................................ACTGCAGCCTCCGCCTCTTA.................... 201.000.001.00-------------------------------------------------------------
......................................................................................................................................................................................................................CAGCCTCCGCCTCCCGGGAG................ 201.000.00------------1.00-------------------------------------------------
......................................................................................................................................................................................................................CAGCCTCCGCCTCCCGGGTTCATGCG.......... 261.000.00-1.00------------------------------------------------------------
...................................................................................................................................................................................................................CTGCAGCCTCCGCCTCCCGGGTTGAT............. 261.000.001.00-------------------------------------------------------------
....................................................................................................................................................................................................................TGCAGCCTCCGCCTCCCGGGTTCAACCG.......... 281.000.00-1.00------------------------------------------------------------
.....................................................................................................................................................................................................................GCAGCCTCCGCCTCCCGGGTTGGG............. 241.000.001.00-------------------------------------------------------------
........................................................................................................................................................................................................................GCCTCCGCCTCCCGGGTTCAAGAT.......... 241.000.00------1.00-------------------------------------------------------
......................................................................................................................................................................................................................CAGCCTCCGCCTCCCGGGTGAG.............. 221.000.001.00-------------------------------------------------------------
.............................................................................................................................................................................................................GGCTCACTGCAGCCTCCGCCTCCCGGGTCAC.............. 311.000.001.00-------------------------------------------------------------
.....................................................................................................................................................................................................................GCAGCCTCCGCCTCCCGGGTTCAACCGC......... 281.000.00-1.00------------------------------------------------------------
.................................................................................................................................................................................................................CACTGCAGCCTCCGCCTCCCGGGTTTACC............ 291.000.001.00-------------------------------------------------------------
..............................TTCTACTTACCAGTTCTAAGACTTTGGGGC.............................................................................................................................................................................................. 3011.001.00------------------------------1.00-------------------------------
............................................................................................................................................................................................................CGGCTCACTGCAGCCTCCGCCTTAGT.................... 261.000.00-------------------------------------------------1.00------------
.....................................................................................................................................................................................................................GCAGCCTCCGCCTCCCGGGTTCCTG............ 251.000.00-1.00------------------------------------------------------------
....................................................................................................GGGCACTCTGATAGGACACTCT................................................................................................................................ 221.000.00-----------------------------------1.00--------------------------
........................................................................................................................................................................................................................GCCTCCGCCTCCCGGGTACGG............. 211.000.001.00-------------------------------------------------------------
.....................................................................................................................................................................................................................GCAGCCTCCGCCTCCCGGGTCC............... 221.000.001.00-------------------------------------------------------------
.........................................................................................................................................................................................................TCTCGGCTCACTGCAGCCTCCGCGCGC...................... 271.000.00-1.00------------------------------------------------------------
..................................................................................................................................................................................................GGCGCGATCTCGGCTCACTTTGA................................. 231.000.00-------------------------1.00------------------------------------
.........................................................................................................................................................................................................................CCTCCGCCTCCCGGGTTATGC............ 211.000.00----------------------------------------------1.00---------------
.................................................................................................................................................................................................................CACTGCAGCCTCCGCCGCG...................... 191.000.00--------1.00-----------------------------------------------------
...................................................................................................................................................................................................................CTGCAGCCTCCGCCTCCCGGGTCTAG............. 261.000.00-1.00------------------------------------------------------------
......................................................................................................................................................................................................CGATCTCGGCTCACTGCAGCCTATCC.......................... 261.000.001.00-------------------------------------------------------------
.........................................................................................................................................................................................................................CCTCCGCCTCCCGGGTTCAATCC.......... 231.000.001.00-------------------------------------------------------------
................................................................................................................................................................................................................CCCGGGAGGCGGAGGCTGCAGTGA.................. 2401.001.00--1.00-----------------------------------------------------------
......................................................................................................................................................................................................................CCCGGGAGGCGGAGGCTG.................. 1801.001.00---1.00----------------------------------------------------------
......................................................................................................................................................................................................................CAGCCTCCGCCTCCCGGGTTCAAGCAAAGG...... 301.000.001.00-------------------------------------------------------------
........................................................................................................................................................................................................ATCTCGGCTCACTGCAGCCTCCGA.......................... 241.000.00---------1.00----------------------------------------------------
.............................................................................................................................................................................................................................CGCCTCCCGGGTTCAAGCAATTCTCCTGCCAA 321.000.00----------------------------------1.00---------------------------
.....................................................................................................................................................................................................................GCAGCCTCCGCCTCCCAGC.................. 191.000.00---------------------------------1.00----------------------------
......................................................................................................................................................................................................................CAGCCTCCGCCTCCCGGGTTCAAGCAATTG...... 301.000.001.00-------------------------------------------------------------
.........................................................................................................................................................................................................................CCTCCGCCTCCCGGGTTCAAGCAATTCTCCGAT 331.000.00------------------------1.00-------------------------------------
.....................................................................................................................................................................................................................GCAGCCTCCGCCTCCCGGGTTCAAGCACGGG...... 311.000.001.00-------------------------------------------------------------
...........................TCTAAGACTTTGGGGCAGA............................................................................................................................................................................................................ 1911.001.00--------------------------------------1.00-----------------------
............................................................................................................................................................................................................................CCGCCTCCCGGGTTCATG............ 181.000.00---1.00----------------------------------------------------------
.................................................................................................................................................................................................................CACTGCAGCCTCCGCCTCCCGGGTCACG............. 281.000.001.00-------------------------------------------------------------
......................................................................................................................................................................................................................CAGCCTCCGCCTCCCGGGTTCAAAG........... 251.000.001.00-------------------------------------------------------------
....................................................................................................................................................................................................CGCGATCTCGGCTCACTGCAGCCTTCC........................... 271.000.001.00-------------------------------------------------------------
.................................................................................................................................................................................................................CACTGCAGCCTCCGCCTCCCGGGTTCATACC.......... 311.000.00-1.00------------------------------------------------------------
...................................................................................................................................................................................................................CTGCAGCCTCCGCCTCCCGGGTCGGG............. 261.000.00-1.00------------------------------------------------------------
.......................AAGACTTTGGGGCAGATTTC............................................................................................................................................................................................................... 2011.001.00-------------------------------------1.00------------------------
......................................................................................................................................................................................................................CAGCCTCCGCCTCCCGGGTTGTG............. 231.000.001.00-------------------------------------------------------------
...............................................................................................................................................................................................................CTCACTGCAGCCTCCGCACC....................... 201.000.001.00-------------------------------------------------------------
..........................................................................................................................................................................................................................AGGAGAATTGCTTGAACCCGGGAGGCGGAG.. 3001.001.00-------1.00------------------------------------------------------
.........................................................................................................................................................................................................................CCTCCGCCTCCCGGGTTCAAGCAATTGCC.... 291.000.001.00-------------------------------------------------------------
...............................................................................................................................................................................................................CTCACTGCAGCCTCCGCCTCCCGGGTTCAAAGC.......... 331.000.001.00-------------------------------------------------------------
........................................................................................................................................................TGGCGACAGAGCGAGGCTCCGTCTCAAA...................................................................... 2890.110.110.11-------------------------------------------------------------