ID: uc001uvz.2_intron_8_0_chr13_37581209_f.5p
GENE: EXOSC8(9)
chr13:37581159-37581408+


(2)
AGO2.ip
(1)
BRAIN
(1)
BREAST
(7)
CELL-LINE
(9)
CERVIX
(8)
HEART
(2)
HELA
(2)
LIVER
(3)
OTHER
(14)
SKIN

Sense strand
AAACATTTTGGATGCCTGCACATTTGCTTTGCTAGCGGCTTTAAAAAATGGTAAGCAGCCTTACAAAAAAGGCAATATTCCCACTCATGGGTTAGAATGTTGTTTTGTGAAACTTTTAATGTACATTTGCTTTCGTATGCTTCCAAATTAATGAATGTAATGCTGACATGACTTTCCAAATATAGTTGATAGTTGTATATTCTCTAACTGAATGCTCTTTAGAGTGCTGCTTTGACTGTACCCATCTACT
.......................................................................................................((((.((((......((((....((((.(((((..............))))).)))).....))))...))))))))......................................................................
...................................................................................................100......................................................................................188............................................................
SizePerfect hitTotal NormPerfect NormSRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040030(GSM532915)
G013N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR189783SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR040025(GSM532910)
G613T. (cervix)
DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)
SRR189786SRR040024(GSM532909)
G613N. (cervix)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR040040(GSM532925)
G612N. (cervix)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR040022(GSM532907)
G575N. (cervix)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................................................................................................................................CTGACATGACTTTCCAAAAAAC..................................................................22210.007.502.002.000.501.001.00----1.50--0.500.50---------------------0.50-----0.50-----
..................................................................................................................................................................CTGACATGACTTTCC.........................................................................1578.868.862.860.571.001.431.290.43-------0.430.14--------------------0.290.14-------0.29--
..................................................................................................................................................................CTGACATGACTTTCCAAA......................................................................1827.507.500.501.001.500.50----1.00------1.00-------------0.50--0.50----0.50-0.50-------
..................................................................................................................................................................CTGACATGACTTTCCA........................................................................1636.676.672.671.331.00-0.670.67------------------------------------0.33----
..................................................................................................................................................................CTGACATGACTTTCCAAAAAA...................................................................2126.007.50--1.001.501.00------0.50--------------------0.50---0.50-0.50-0.50------
........................................................................................................TTGTGAAACTTTTAATGTACATTTG.........................................................................................................................2514.004.00-------2.00---------1.00-----1.00-----------------------
....................................................................................................................................................................GACATGACTTTCCAAAAAAC..................................................................2053.800.200.601.200.800.200.200.20-------0.40-------------------------------0.20-
.....................................................................................................................................................................ACATGACTTTCCAAAAAA...................................................................182.000.00-1.00---1.00-----------------------------------------
...................................................................................................................................................................TGACATGACTTTCCAAAAAAC..................................................................2131.331.00-0.330.33-0.67------------------------------------------
......................................................................................................TTTTGTGAAACTTTTAATGTACATTTG.........................................................................................................................2711.001.00--------------1.00--------------------------------
..................................................GTAAGCAGCCTTACAAAAAAGGCAATATTCCCACTCATGGGTTAGAATGTTGTTTTGTGAAACTTTTAATGTACATTTG.........................................................................................................................7911.001.00------------------------------1.00----------------
.......................................................................................TGGGTTAGAATGTTGATGT................................................................................................................................................191.000.00---------------------------------1.00-------------
...............................CTAGCGGCTTTAAAAAATGTAC.....................................................................................................................................................................................................221.000.00------1.00----------------------------------------
...................................................................................................................................................................TGACATGACTTTCCAAA......................................................................1731.001.000.33--0.67-------------------------------------------
.................................................................................................................................................................GCTGACATGACTTTCCAAA......................................................................1911.001.00----------------------------1.00------------------
....................................................................................................................................................................GACATGACTTTCCAACCAC...................................................................191.000.00----------------------------------1.00------------
.......................................................................................TGGGTTAGAATGTTGTTTAGTT.............................................................................................................................................221.000.00-------------------------------1.00---------------
...................................................................................................................................................................TGACATGACTTTCCAAAAAA...................................................................2031.001.00--0.67----------------------------------------0.33---
..................................................................................................................................................................................................................AATGCTCTTTAGAGTGCTGCTGAC................241.000.00---------------------------1.00-------------------
.......................................................................................TGGGTTAGAATGTTGTTTGTTT.............................................................................................................................................221.000.00---------------------1.00-------------------------
............................................................................................................GAAACTTTTAATGTACATTTG.........................................................................................................................2111.001.00----------------1.00------------------------------
.............................................................................................................AAACTTTTAATGTACATTTG.........................................................................................................................2011.001.00-------------------------1.00---------------------
..........................................................................................................GTGAAACTTTTAATGTACATTTG.........................................................................................................................2311.001.00-------------------1.00---------------------------
....................................................................................................................................................................GACATGACTTTCCAAAAAA...................................................................1950.800.20--0.200.20-------0.40-----------------------------------
..................................................................................................................................................................CTGACATGACTTTCCAA.......................................................................1720.500.500.50----------------------------------------------
..................................................................................................................................................................CTGACATGACTTTCCAAAAACC..................................................................2220.507.500.50----------------------------------------------
..................................................................................................................................................................CTGACATGACTTTCCAAC......................................................................1820.500.50-----------------------------0.50-----------------
..................................................................................................................................................................CTGACATGACTTTCCAAACA....................................................................2020.507.50--------0.50--------------------------------------
...................................................................................................................................................................TGACATGACTTTCCAAACATG..................................................................2130.331.00------------0.33----------------------------------
....................................................................................................................................................................GACATGACTTTCCAAA......................................................................1650.200.200.20----------------------------------------------
................................................................................................................CTTTTAATGTACATTTG.........................................................................................................................1770.140.14----------------------------------------------0.14

Antisense strand
AAACATTTTGGATGCCTGCACATTTGCTTTGCTAGCGGCTTTAAAAAATGGTAAGCAGCCTTACAAAAAAGGCAATATTCCCACTCATGGGTTAGAATGTTGTTTTGTGAAACTTTTAATGTACATTTGCTTTCGTATGCTTCCAAATTAATGAATGTAATGCTGACATGACTTTCCAAATATAGTTGATAGTTGTATATTCTCTAACTGAATGCTCTTTAGAGTGCTGCTTTGACTGTACCCATCTACT
.......................................................................................................((((.((((......((((....((((.(((((..............))))).)))).....))))...))))))))......................................................................
...................................................................................................100......................................................................................188............................................................
SizePerfect hitTotal NormPerfect NormSRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040030(GSM532915)
G013N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR189783SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR040025(GSM532910)
G613T. (cervix)
DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)
SRR189786SRR040024(GSM532909)
G613N. (cervix)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR040040(GSM532925)
G612N. (cervix)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR040022(GSM532907)
G575N. (cervix)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................................................................................................................................TTTGGAAAGTCATGTCAG...................................................................... 1821.001.00-----------0.500.50----------------------------------
.................................................................................................................................................................GCTGACATGACTTTCGAA....................................................................... 181.000.00----------1.00------------------------------------
..................................................................................................................................................................CTGACATGACTTTCCGGG...................................................................... 1871.000.00--------------------1.00--------------------------
..................................................................................................................................................................CTGACATGACTTTCCAATA..................................................................... 1921.000.00------------------------1.00----------------------
..................CACATTTGCTTTGCTGGC...................................................................................................................................................................................................................... 181.000.00----------------------1.00------------------------
......AATGTGCAGGCATCCAAA.................................................................................................................................................................................................................................. 1820.500.50----------0.50------------------------------------
....................................................................................................................................................................TTTGGAAAGTCATGTC...................................................................... 1650.200.20--0.20--------------------------------------------