ID: uc001unq.3_intron_8_0_chr13_21374465_r.5p
GENE: (14)
chr13:21374770-21375019-


(1)
AGO1.ip 		(2)
B-CELL 		(1)
BRAIN 		(6)
BREAST 		(5)
CELL-LINE 		(1)
CERVIX 		(1)
HEART 		(2)
HELA 		(1)
KIDNEY 		(1)
LIVER 		(1)
OTHER 		(8)
SKIN

Sense strand
AACGCTGGGCAAAGACTTATCTCCTGGTGGATGAAAAACTGTATGATCAGGTCAGAATGTAAAACTTAAAACTTCATTTGGATTTATGATGATAGCAGTTATAGAAGCAGGAACATTTTTCTTGGTGGTTTTTCATCAAAATAGAACTGTTTAAGAGCAGTTTAACATTTTCTGTGTGGAAGAGAATTATGTGACTGGAATGCTGTTTTAATGTGTTTTTGAGCACATCCCTTGATATCGTTTATTTTAA
............................................................................((((..((((((((.......))))))))..))))...........................................................................................................................................
.......................................................56...............................................................121...............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189787SRR189785SRR189786SRR189782DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040029(GSM532914)
G026T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR343335TAX577579(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
............................................................AAAACTTAAAACTTCACAG...........................................................................................................................................................................1957.000.0043.002.008.003.00--------------------1.00----------
............................................................AAAACTTAAAACTTCACAGT..........................................................................................................................................................................2011.000.00-7.00-4.00-------------------------------
.....................TCCTGGTGGATGAAAAACTGTATGATCAG........................................................................................................................................................................................................2913.003.00---------1.00-2.00-----------------------
.............................................................AAACTTAAAACTTCACAG...........................................................................................................................................................................182.000.001.00-----------------1.00----------------
......................CCTGGTGGATGAAAAACTGTATGATCAG........................................................................................................................................................................................................2812.002.00----------2.00------------------------
.........................GGTGGATGAAAAACTGTA...............................................................................................................................................................................................................1812.002.00------------1.00-1.00--------------------
.......................CTGGTGGATGAAAAACTGTATGATCAG........................................................................................................................................................................................................2712.002.00-----2.00-----------------------------
..................................................................................................TTATAGAAGCAGGAAAGAC.....................................................................................................................................191.000.00----------------------1.00------------
........................................................................TTCATTTGGATTTATGCTTC..............................................................................................................................................................201.000.00-------1.00---------------------------
...........................................................TAAAACTTAAAACTT................................................................................................................................................................................1501.001.00----------------------------1.00------
..........................GTGGATGAAAAACTGTATGATCAG........................................................................................................................................................................................................2411.001.00-----------------------1.00-----------
............................................................AAAACTTAAAACTTCACAA...........................................................................................................................................................................191.000.001.00----------------------------------
.....................................................................................................TAGAAGCAGGAACATTTTG..................................................................................................................................191.000.00----1.00------------------------------
.....................TCCTGGTGGATGAAAAACTGTATGATCA.........................................................................................................................................................................................................2811.001.00---------------------1.00-------------
............................................................AAAACTTAAAACTTCACTGT..........................................................................................................................................................................201.000.00---1.00-------------------------------
...........................................................................................................................................................AGCAGTTTAACATTTGA..............................................................................171.000.00------------1.00----------------------
..............................ATGAAAAACTGTATGTTCC.........................................................................................................................................................................................................191.000.00--------------------------1.00--------
.....................................................................................................TAGAAGCAGGAACATTTTTAAT...............................................................................................................................221.000.00----1.00------------------------------
........................TGGTGGATGAAAAACTGTAT..............................................................................................................................................................................................................2011.001.00---------------------------1.00-------
........................TGGTGGATGAAAAACTGTATGATCAGATA.....................................................................................................................................................................................................2911.001.00------1.00----------------------------
.................................................................................................................................................................TTAACATTTTCTGTGTTCTT.....................................................................201.000.00----1.00------------------------------
.......................................................................................GATGATAGCAGTTATAGAAGCAGGAAC........................................................................................................................................2711.001.00-------------------------1.00---------
........................TGGTGGATGAAAAACTGTA...............................................................................................................................................................................................................1911.001.00------1.00----------------------------
....................CTCCTGGTGGATGAAAAACTGTATGATCAG........................................................................................................................................................................................................3011.001.00--------------------1.00--------------
............................................................................................................................................................................................ATGTGACTGGAATGCTGTTTTAATGTGTT.................................2911.001.00-----------------1.00-----------------
...................................................................................................................TTTTTCTTGGTGGTTTTGTC...................................................................................................................201.000.00------------------------------1.00----
........................TGGTGGATGAAAAACTGTATGATCAG........................................................................................................................................................................................................2611.001.00-------------------1.00---------------
...........................................................TAAAACTTAAAACTTCACAG...........................................................................................................................................................................201.000.001.00----------------------------------
..........................................................................................................................................................................................TTATGTGACTGGAATGC...............................................1711.001.00-------------1.00---------------------
............................................................AAAACTTAAAACTTCACA............................................................................................................................................................................181.000.00-------1.00---------------------------
.................................AAAAACTGTATGATCAG........................................................................................................................................................................................................1730.670.67-------------------------------0.33-0.33-
................................GAAAAACTGTATGATCAG........................................................................................................................................................................................................1820.500.50-------------------------------0.50---
............................GGATGAAAAACTGTATG.............................................................................................................................................................................................................1720.500.50--------------------------------0.50--
........................................................................................................................................................................TTTCTGTGTGGAAGAG..................................................................1680.120.12----------------------------------0.12

Antisense strand
AACGCTGGGCAAAGACTTATCTCCTGGTGGATGAAAAACTGTATGATCAGGTCAGAATGTAAAACTTAAAACTTCATTTGGATTTATGATGATAGCAGTTATAGAAGCAGGAACATTTTTCTTGGTGGTTTTTCATCAAAATAGAACTGTTTAAGAGCAGTTTAACATTTTCTGTGTGGAAGAGAATTATGTGACTGGAATGCTGTTTTAATGTGTTTTTGAGCACATCCCTTGATATCGTTTATTTTAA
............................................................................((((..((((((((.......))))))))..))))...........................................................................................................................................
.......................................................56...............................................................121...............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189787SRR189785SRR189786SRR189782DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040029(GSM532914)
G026T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR343335TAX577579(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
..................................................GTCAGAATGTAAAACTGATC.................................................................................................................................................................................... 203.000.00--------1.001.00-----1.00-------------------
..................................................GTCAGAATGTAAAACGA....................................................................................................................................................................................... 172.000.002.00----------------------------------
..................................................GTCAGAATGTAAAACGT....................................................................................................................................................................................... 171.000.00----1.00------------------------------
..................................................GTCAGAATGTAAAACGATC..................................................................................................................................................................................... 191.000.00--------1.00--------------------------
..................................................GTCAGAATGTAAAACGG....................................................................................................................................................................................... 171.000.001.00----------------------------------
..................................................GTCAGAATGTAAAACTTTTT.................................................................................................................................................................................... 201.000.00----------------1.00------------------
.........................................TATGATCAGGTCAGAAAG............................................................................................................................................................................................... 181.000.00-----------------------------1.00-----
..................................................GTCAGAATGTAAAACGCCC..................................................................................................................................................................................... 191.000.00----1.00------------------------------