ID: uc001umm.1_intron_3_0_chr13_20413126_r.5p
GENE: ZMYM5(1)
chr13:20425295-20425544-


(1)
AGO2.ip
(1)
BREAST
(5)
CELL-LINE
(2)
CERVIX
(1)
HELA
(1)
LIVER
(1)
OTHER
(1)
SKIN

Sense strand
GGCAGGAGACTTATTTCAGAATGGAGAATTTGCAACTCATCATAGTCCTGGTAAGCAGTAAGTGATACTGTTTCTACCTCAAGTAAATAAGCCTTTGGCTGTTCTTTTTAGTAAAGCTCATATCTATTTTATTCACATTCTGTGGCTTTGCTTTTTTTGTTTGCTTGTTTGTTTGTTTGTTTTTGGAGACCGAGTTTCGCTCTTCTCACCCAGGCTGGCTGGAGTACAATGGCGCAATCTCAGCTCATTG
...............................................................................(((((((((((((....(((..........((((((((.((((..................))))))))))))..........))).))))))))))))).......................................................................
...........................................................60..........................................................................................................................184................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR189785SRR040008(GSM532893)
G727N. (cervix)
SRR189786SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
GSM532886(GSM532886)
G850T. (cervix)
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTTTGGC..............................................................2911.000.009.002.00-------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGTTTTGGC........................................................................278.000.005.003.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTTGG................................................................2716.006.006.00--------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTAGAG................................................................264.000.002.002.00-------------
................................................................ATACTGTTTCTACCTCAAGTAAATAAGC..............................................................................................................................................................2814.004.00---4.00-----------
.........................................................................................................................................................TTTTTGTTTGCTTGTTTGTTTGTCTTC......................................................................274.000.00-4.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTCTG......................................................................253.000.00-3.00-------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTCTTG................................................................263.000.00--3.00------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGTTCTTG.................................................................303.000.001.002.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTCTTC..................................................................253.000.002.001.00-------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGTTTCTTG................................................................303.000.00-3.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTTCG................................................................272.000.001.001.00-------------
....................................................................................................................................................................TTGTTTGTTTGTTTGTTTTTGGGGGC............................................................262.000.002.00--------------
..................................................................................................................................................................GCTTGTTTGTTTGTTTGTTTTTGG................................................................2412.002.002.00--------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTCCC................................................................262.000.002.00--------------
.........................................................................................................................................................TTTTTGTTTGCTTGTTTGTTTGTGAG.......................................................................262.000.002.00--------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGATT....................................................................272.000.002.00--------------
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTGTTTAC..................................................................272.000.002.00--------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTATTC................................................................262.000.002.00--------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTAGTT....................................................................272.000.002.00--------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTTGCTC..............................................................282.000.00-2.00-------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGTTTCTCC................................................................302.000.001.001.00-------------
..........................................................................................................................................................TTTTGTTTGCTTGTTTGTTTGTTTGTTG....................................................................282.000.00-2.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGTTAGG..................................................................292.000.001.001.00-------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGTTTAGA.................................................................292.000.002.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTTGTTT..............................................................292.000.00-2.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTTTTAG..............................................................292.000.00-2.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTTTGG...............................................................282.000.00-2.00-------------
..........................................................................................................................................................TTTTGTTTGCTTGTTTGTTTGTTTGTTCCTA.................................................................312.000.00-2.00-------------
........................................................................................................................................................TTTTTTGTTTGCTTGTTTGTTTGTTTGGGAC...................................................................312.000.00-2.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTTGGAG..............................................................2912.002.002.00--------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTTTTCTC..............................................................272.000.002.00--------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTTTTGG...............................................................262.000.00-2.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTCTGG..................................................................252.000.001.001.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGTTTTTGG................................................................3112.002.001.001.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTCGAG....................................................................272.000.002.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTCTCT................................................................272.000.00-2.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTCTGG....................................................................272.000.00-2.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTCGG.................................................................262.000.002.00--------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTTCTGA..............................................................282.000.002.00--------------
........................................................................................................................................................TTTTTTGTTTGCTTGTTTGTTTGGGG........................................................................262.000.002.00--------------
.........................................................................................................................................................TTTTTGTTTGCTTGTTTGTTTGTTTATA.....................................................................282.000.00-2.00-------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGTTTTCCC........................................................................272.000.002.00--------------
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTGTTTTGAGC...............................................................302.000.00-2.00-------------
....................................................................................................................................................TGCTTTTTTTGTTTGCTTGTTTGTTTTGC.........................................................................292.000.001.001.00-------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTCTGG................................................................262.000.002.00--------------
..........................................................................................................................................................TTTTGTTTGCTTGTTTGTTTGGC.........................................................................232.000.001.001.00-------------
.........................................................................................................................................................TTTTTGTTTGCTTGTTTGTTTGTGTGG......................................................................271.000.001.00--------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTTCAGG..............................................................281.000.00-1.00-------------
................................................................ATACTGTTTCTACCTCAAGT......................................................................................................................................................................2011.001.00-----1.00---------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGGGA....................................................................271.000.00-1.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTGTTC................................................................271.000.00-1.00-------------
........................................................................................................................................................TTTTTTGTTTGCTTGTTTGTTTGTATG.......................................................................271.000.00-1.00-------------
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTGTTTGGAG................................................................291.000.001.00--------------
........................................................................................................................................................TTTTTTGTTTGCTTGTTTGTTTGTGAG.......................................................................271.000.00-1.00-------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGTTTTTACT...............................................................311.000.001.00--------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTTCAC................................................................251.000.00-1.00-------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTTTGGAG..............................................................2711.001.001.00--------------
......AGACTTATTTCAGAATGGAGAATTTGCAACTC....................................................................................................................................................................................................................3211.001.00----1.00----------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTAACT................................................................271.000.001.00--------------
..........................................................................................................................................................TTTTGTTTGCTTGTTTGTTTGTTTGTTTTCC.................................................................311.000.00-1.00-------------
........................................................................................................................................................TTTTTTGTTTGCTTGTTTGTTTAGAA........................................................................261.000.001.00--------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTACC................................................................261.000.00-1.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTCTAG................................................................271.000.00--1.00------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGTTTCATC................................................................311.000.001.00--------------
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTGTTTGGAC................................................................291.000.001.00--------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTACT.....................................................................251.000.00-1.00-------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTTCTG................................................................251.000.00-1.00-------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTTCTTG...............................................................261.000.00-1.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGTTTGTTG................................................................311.000.00-1.00-------------
........................................................................................................................................................TTTTTTGTTTGCTTGTTTGTTTGTTCGTC.....................................................................291.000.00-1.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTAGA.................................................................261.000.00-1.00-------------
.......................................................................................................................ATATCTATTTTATTCCATG................................................................................................................191.000.00----------1.00----
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTGTTAGT..................................................................271.000.001.00--------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTTCCT...............................................................271.000.001.00--------------
.......................................................................................................................................................................TTTGTTTGTTTGTTTTTGGGAGC............................................................231.000.001.00--------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTCTCT................................................................251.000.00-1.00-------------
................CAGAATGGAGAATTTGCA........................................................................................................................................................................................................................1811.001.00-----------1.00---
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTTTCT...............................................................271.000.00-1.00-------------
........................................................................................................................................................TTTTTTGTTTGCTTGTTTGTTGTGC.........................................................................251.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGCCGG...................................................................241.000.001.00--------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTTATC...............................................................271.000.00-1.00-------------
.............................................................................................................................................GTGGCTTTGCTTTTTTTCTTT........................................................................................211.000.001.00--------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTCGA.....................................................................251.000.001.00--------------
...................................................................................................................................................................CTTGTTTGTTTGTTTGTTTTTGG................................................................2311.001.001.00--------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGTTTTGCC................................................................301.000.001.00--------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGTTTGG..........................................................................251.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTCCCC................................................................271.000.001.00--------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGTTTTAG.........................................................................261.000.001.00--------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGCCTC...................................................................271.000.00-1.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTCGAG................................................................271.000.00-1.00-------------
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTGTTTCGAG................................................................291.000.00-1.00-------------
...................................................................................................................................................................CTTGTTTGTTTGTTTGTTTTCCCC...............................................................241.000.001.00--------------
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTGTTCGAG.................................................................281.000.001.00--------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTCGGG....................................................................261.000.001.00--------------
..............................................................................................................................................TGGCTTTGCTTTTTTTGTTTTTT.....................................................................................231.000.001.00--------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGTTTTTCC........................................................................271.000.001.00--------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTTTGG................................................................2511.001.001.00--------------
...........................................................................................................................................................................TTTGTTTGTTTTTGGAGACCGGCC.......................................................241.000.00-1.00-------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTTTCT................................................................251.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTCT...................................................................241.000.00-1.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTTGGAGAGG...........................................................321.000.001.00--------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTTTCTG...............................................................261.000.00-1.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGTTTTTC.................................................................301.000.00-1.00-------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTAAC.................................................................241.000.00-1.00-------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGTTTGTTTGTTG....................................................................311.000.00--1.00------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTTTAC...............................................................271.000.001.00--------------
..............................................................................................................................................................GTTTGCTTGTTTGTTTGTTTGTTTTTTTC...............................................................291.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTGGG.................................................................261.000.00-1.00-------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGTTTGTTG........................................................................271.000.001.00--------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGTTTTTTAG...............................................................311.000.00-1.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGTTCTCC.................................................................301.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGCTCA...................................................................241.000.00-1.00-------------
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTGTTTTTGCC...............................................................301.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTCTG..................................................................251.000.001.00--------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTAATG....................................................................271.000.00--1.00------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTCCT.....................................................................261.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTCTTG................................................................271.000.00--1.00------------
........................................................................................................................................................TTTTTTGTTTGCTTGTTTGTTTATG.........................................................................251.000.001.00--------------
.........................................................................................................................................................TTTTTGTTTGCTTGTTTGTTTGGCC........................................................................251.000.00-1.00-------------
..........................................................................................................................................................TTTTGTTTGCTTGTTTGTTTGTTTCGAG....................................................................281.000.001.00--------------
........................................................................................................................................ATTCTGTGGCTTTGCTTTTTTTGTCTGC......................................................................................281.000.00-1.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTTTAG...............................................................281.000.00--1.00------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGTTTGTCT........................................................................271.000.001.00--------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTTACCC...............................................................261.000.001.00--------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGTTTGTTTTGG.....................................................................301.000.00-1.00-------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGTTTGTTTTCC.....................................................................301.000.001.00--------------
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTGTTTTCAG................................................................291.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTCGT..................................................................251.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTCTGG.....................................................................221.000.00-1.00-------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTGGTT.................................................................251.000.001.00--------------
.....................................................................................................................................................GCTTTTTTTGTTTGCTTGTTTGTTTGTTTT.......................................................................301.000.001.00--------------
...................................................................................................................GCTCATATCTATTTTATTC....................................................................................................................1911.001.00-----1.00---------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTATG...................................................................241.000.00-1.00-------------
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTCGAG....................................................................251.000.001.00--------------
.........................................................................................................................................................TTTTTGTTTGCTTGTTTGTTTGTCCGT......................................................................271.000.001.00--------------
..................................................................................................................................................................GCTTGTTTGTTTGTTTGTTTTTACC...............................................................251.000.00-1.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGTTTTAAC................................................................311.000.001.00--------------
..........................................................................................................................................................TTTTGTTTGCTTGTTTGTTTGTTTGTTTTGT.................................................................311.000.00-1.00-------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTTCT................................................................261.000.001.00--------------
..................................................................................................................................................................GCTTGTTTGTTTGTTTGTTTTTTCT...............................................................251.000.00-1.00-------------
..........................................................................................................................................................TTTTGTTTGCTTGTTTGTTTGTTTGGAC....................................................................281.000.001.00--------------
...................................................................................................................................................................CTTGTTTGTTTGTTTGTTTTCAG................................................................231.000.001.00--------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTTGGGGGG............................................................3011.001.001.00--------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGTGTCC..................................................................281.000.001.00--------------
......................................................................................................................................ACATTCTGTGGCTTTGCTTTT...............................................................................................2111.001.00-1.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGTGAC...................................................................281.000.00-1.00-------------
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTGTTTTGC.................................................................281.000.00-1.00-------------
...........................................................................................................................................................................................................TCTCACCCAGGCTGGCTGTGGC.........................221.000.001.00--------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGTTTTGGG................................................................301.000.00-1.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTGGTT................................................................271.000.001.00--------------
..............................................................................................................................................................GTTTGCTTGTTTGTTTGTTTGTTTTTTGGC..............................................................301.000.001.00--------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGTTTGAGG................................................................311.000.001.00--------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTTGG................................................................2611.001.001.00--------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTCGTT....................................................................271.000.001.00--------------
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTGTTCCGC.................................................................281.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGCGTT...................................................................241.000.001.00--------------
.....................TGGAGAATTTGCAACTCATCATAGTCCTGAGAT....................................................................................................................................................................................................331.000.00--------1.00------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTAGAG................................................................271.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTCCGC....................................................................231.000.001.00--------------
...................................................................................................................................................................CTTGTTTGTTTGTTTGTTTTCACC...............................................................241.000.001.00--------------
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTGTTTTTAGAG..............................................................311.000.00-1.00-------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGTTTGTTTCGAG....................................................................311.000.001.00--------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTCAGG....................................................................271.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTCTT................................................................271.000.00-1.00-------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGGT.....................................................................251.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTCACA.................................................................261.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTCTGG...............................................................281.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTTTCTC..............................................................291.000.001.00--------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTCTGA...............................................................271.000.00-1.00-------------
...................................................................................................................................................................CTTGTTTGTTTGTTTGTTTTTCTGC..............................................................251.000.001.00--------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTGGTG.................................................................241.000.001.00--------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGGCC........................................................................231.000.001.00--------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTGTTG.............................................................................221.000.00-1.00-------------
..................................................................................................................................................................GCTTGTTTGTTTGTTTGTTTTTTAC...............................................................251.000.001.00--------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTCGTT................................................................251.000.001.00--------------
................................................................ATACTGTTTCTACCTCAA........................................................................................................................................................................1811.001.00---------1.00-----
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTCCG................................................................271.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTCAC................................................................271.000.001.00--------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGGT.....................................................................261.000.00-1.00-------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGTTTTGCC........................................................................271.000.001.00--------------
................................................................ATACTGTTTCTACCTCAAGTAAACAAG...............................................................................................................................................................271.000.00------------1.00--
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGTTTCGAG................................................................301.000.001.00--------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTTTGG...............................................................271.000.00-1.00-------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTCTTG.................................................................241.000.00-1.00-------------
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTGTTTTTGG................................................................2911.001.00-1.00-------------
..........................................................................................................................................................TTTTGTTTGCTTGTTTGTTTCTTG........................................................................241.000.00-1.00-------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTCTC.................................................................241.000.00-1.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTGGAG................................................................271.000.00-1.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTCGG......................................................................251.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTGTCT................................................................271.000.001.00--------------
.....................................................................................................................................................................TGTTTGTTTGTTTGTTTTTGGGGGC............................................................251.000.00-1.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGTC.....................................................................261.000.001.00--------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTCGG.....................................................................261.000.001.00--------------
..............................................................................................................................................................GTTTGCTTGTTTGTTTGTTTGTTTTGCG................................................................281.000.00-1.00-------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGTTCGAG.................................................................291.000.00-1.00-------------
..........................................................................................................................................................TTTTGTTTGCTTGTTTGTTTGTTTGTC.....................................................................271.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTTGGGGG.............................................................3011.006.001.00--------------
..................................................................................................................................................................GCTTGTTTGTTTGTTTGTTCTGG.................................................................231.000.001.00--------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGTTC....................................................................271.000.001.00--------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTCGAG....................................................................261.000.001.00--------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGTTTGTTCCTG.....................................................................301.000.00-1.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGTTTAC..................................................................291.000.001.00--------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTCGG.................................................................241.000.001.00--------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGTTTATT.................................................................291.000.001.00--------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTTTCTGG..............................................................271.000.001.00--------------
..............................................................................................................................................................GTTTGCTTGTTTGTTTGTTTGCACC...................................................................251.000.001.00--------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGTTTTTAAG...............................................................311.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTTCGG...............................................................281.000.00-1.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGTGTG...................................................................281.000.001.00--------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTTTGGGGGG............................................................2911.001.00-1.00-------------
........................................................................................................................................................TTTTTTGTTTGCTTGTTTGTTTAAGG........................................................................261.000.00-1.00-------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTGG...................................................................231.000.00-1.00-------------
...................................................................................................................................................................CTTGTTTGTTTGTTTGTTTTTCCTT..............................................................251.000.00-1.00-------------
....................................................................................................................CTCATATCTATTTTATTCACATTCTG............................................................................................................2611.001.00------1.00--------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGCTCC...........................................................................241.000.001.00--------------
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTGTCTTG..................................................................271.000.001.00--------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGTTTTCG.................................................................291.000.001.00--------------
..................................................................................................................................................................GCTTGTTTGTTTGTTTGTTTTTTGG...............................................................251.000.00-1.00-------------
............................................................................................................................................TGTGGCTTTGCTTTTTTTCC..........................................................................................201.000.001.00--------------
..............................................................................................................................................TGGCTTTGCTTTTTTTCTTT........................................................................................201.000.00-1.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTCGG................................................................271.000.00--1.00------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTGCCA................................................................271.000.001.00--------------
...................................................................................................................................................................CTTGTTTGTTTGTTTGTTTTTGGGGGG............................................................2711.001.001.00--------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGTTTTTGGC...............................................................311.000.001.00--------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGTTTGTTCGTT.....................................................................301.000.001.00--------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTTTCAC...............................................................261.000.001.00--------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTCTG................................................................261.000.001.00--------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTCTTC.................................................................261.000.00-1.00-------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTCTC.....................................................................251.000.001.00--------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTCGTC.....................................................................251.000.00-1.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGATTG...................................................................281.000.00--1.00------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTTGGTT..............................................................2811.001.00-1.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGTTTTCTG................................................................311.000.00-1.00-------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTCGC................................................................261.000.00-1.00-------------
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTGTTC....................................................................251.000.001.00--------------
.................................AACTCATCATAGTCCTG........................................................................................................................................................................................................1711.001.00-------1.00-------
.........................................................................................................................................................TTTTTGTTTGCTTGTTTGTTTGTTCTG......................................................................271.000.00-1.00-------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTAG..................................................................241.000.001.00--------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTCTA.....................................................................261.000.001.00--------------
.............................................................GTGATACTGTTTCTACCTCA.........................................................................................................................................................................2011.001.00---1.00-----------
..........................................................................................................................................................TTTTGTTTGCTTGTTTGTTCCGT.........................................................................231.000.00-1.00-------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTTGTC...............................................................271.000.00-1.00-------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTCGGG................................................................261.000.00-1.00-------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGTTTTCGC........................................................................271.000.00-1.00-------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGTTTGTTTTTCT................................................................311.000.001.00--------------
.......................................................................................................................................................TTTTTTTGTTTGCTTGTTTGTTTGGTC........................................................................271.000.001.00--------------
...........................................................................................................................................................TTTGTTTGCTTGTTTGTTTGCC.........................................................................221.000.00----1.00----------
.............................................................................................................................................................................................................TCACCCAGGCTGGCTGGAGCGC.......................221.000.00-1.00-------------
...............................................................................................................................................................TTTGCTTGTTTGTTTGTTTGTTTTCA.................................................................261.000.001.00--------------
.............................................................................................................................................................TGTTTGCTTGTTTGTTTGTTTCTTG....................................................................251.000.00-1.00-------------
.................................................................................................................................................................TGCTTGTTTGTTTGTTTGTTTTCTT................................................................251.000.00-1.00-------------
................................................................................................................................................................TTGCTTGTTTGTTTGTTTGTTTTTTGGC..............................................................281.000.001.00--------------
............................................................................................................................................................TTGTTTGCTTGTTTGTTTGTTTGTTTGC..................................................................281.000.00-1.00-------------
....................................................................................................................................................TGCTTTTTTTGTTTGCTTGTTTGTT.............................................................................2520.500.500.50--------------
..................................................................................................................AGCTCATATCTATTTTA.......................................................................................................................1720.500.50------0.50--------
..............................................................................................................................................TGGCTTTGCTTTTTTTG...........................................................................................1730.330.330.33--------------
..............................................................................................................................................TGGCTTTGCTTTTTTTGATT........................................................................................2030.330.330.33--------------

Antisense strand
GGCAGGAGACTTATTTCAGAATGGAGAATTTGCAACTCATCATAGTCCTGGTAAGCAGTAAGTGATACTGTTTCTACCTCAAGTAAATAAGCCTTTGGCTGTTCTTTTTAGTAAAGCTCATATCTATTTTATTCACATTCTGTGGCTTTGCTTTTTTTGTTTGCTTGTTTGTTTGTTTGTTTTTGGAGACCGAGTTTCGCTCTTCTCACCCAGGCTGGCTGGAGTACAATGGCGCAATCTCAGCTCATTG
...............................................................................(((((((((((((....(((..........((((((((.((((..................))))))))))))..........))).))))))))))))).......................................................................
...........................................................60..........................................................................................................................184................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR189785SRR040008(GSM532893)
G727N. (cervix)
SRR189786SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
GSM532886(GSM532886)
G850T. (cervix)
........................................................................................................................................................................................................................GGCTGGAGTACAATGGCGCAATGAGC........ 261.000.00-1.00-------------
...............................................................................................................................................................................................................................GTACAATGGCGCAATCTCAGCTCGC.. 251.000.00-------------1.00-
........................................................................................................................................................................................................................GGCTGGAGTACAATGGCGCAATGGGC........ 261.000.001.00--------------
.................................................................................................GCTGTTCTTTTTAGTACAA...................................................................................................................................... 191.000.00--------------1.00