ID: uc001uej.1_intron_7_0_chr12_123473420_r.5p
GENE: PITPNM2(17)
chr12:123474134-123474383-


(1)
BRAIN
(1)
BREAST
(8)
CELL-LINE
(3)
CERVIX
(5)
HEART
(1)
LIVER
(2)
OTHER
(31)
SKIN
(2)
UTERUS
(1)
XRN.ip

Sense strand
CCCTGGCCTGGAGAGGGCCCCTGGCCTCCCTGAGCTGGACATTGGAGAAGGTACCACCCCACACACTTTCCCCTCACTGGGGGTCACTCTGCTGCTGAGCACCCCTCACTGCCAGGCTCTGCCCACCTAGACCCCCGCTTCGGCCTAACAGGGAGCTGGGGGCTGGGCTGGGAGGACTTGGCCATCTAGGGAGGAGGTGGGAGCTGGTGGCATTGTCTGGTGGGGTGGGGGACCAGGGACCCCACGGAGC
...............................................................................................((((.....))))..((((((..((.(((((((((.((((((((((..........))))).)))))))))).))))))..))))))....................................................................
.............................................................................................94.........................................................................................185...............................................................
SizePerfect hitTotal NormPerfect NormSRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040012(GSM532897)
G648N. (cervix)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444066(SRX128914)
Sample 23cDNABarcode: AF-PP-339: ACG CTC TTC . (cell line)
SRR040035(GSM532920)
G001T. (cervix)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
..................................................................................................................................................................CTGGGCTGGGAGGACTCTG.....................................................................1943.000.009.006.002.005.002.003.001.001.00-1.00-1.001.00-----------1.001.00-1.001.00------1.00----1.00--1.00---1.00-1.00---1.001.00--
...................................................................................................................................................................TGGGCTGGGAGGACTCTG.....................................................................1817.000.005.004.00-2.00--1.001.00-1.00----------1.00-----1.00-----------------1.00------------
.................................................................................................................................................................GCTGGGCTGGGAGGACTCTG.....................................................................208.000.001.00-----1.00---1.00-----1.00------------1.00--1.00-------------1.00---1.00------
.................................GCTGGACATTGGAGAAG........................................................................................................................................................................................................1716.006.00--4.00------------1.00---------------------1.00-------------------
.....................................................................................................................................................................GGCTGGGAGGACTTGGCCA..................................................................1913.003.003.00--------------------------------------------------------
........................................ATTGGAGAAGGTACCTATG...............................................................................................................................................................................................192.000.00--------2.00------------------------------------------------
.................................GCTGGACATTGGAGACG........................................................................................................................................................................................................171.000.00--1.00------------------------------------------------------
..................................................................................................GCACCCCTCACTGCCAGGCTC...................................................................................................................................2111.001.00-----------------------1.00---------------------------------
...............................GAGCTGGACATTGGAGAAGT.......................................................................................................................................................................................................201.000.00-------------------------------------------------------1.00-
........................................................................................................................................................................................TCTAGGGAGGAGGTGGGA................................................1821.001.00---------------------------------------------------1.00-----
.....................TGGCCTCCCTGAGCTGGACATTGGAG...........................................................................................................................................................................................................2611.001.00---------------------1.00-----------------------------------
........TGGAGAGGGCCCCTGGAGTT..............................................................................................................................................................................................................................201.000.00-------------------1.00-------------------------------------
..................CCCTGGCCTCCCTGAGCTGGTTT.................................................................................................................................................................................................................231.000.00--------------------------------------1.00------------------
.......................................................................CCTCACTGGGGGTCACTCTGCTGCT..........................................................................................................................................................2511.001.00-----------------1.00---------------------------------------
..................................................................................................................................................................................................................CATTGTCTGGTGGGGAGT......................181.000.00---------------------------------1.00-----------------------
.................................................................................................................................................................................................................................TGGGGGACCAGGGACGGAT......191.000.00------------------------------------------1.00--------------
...............................................................................................................................................................GGGCTGGGCTGGGAG............................................................................1501.001.00------------------------------1.00--------------------------
.................................................................................................................................................................GCTGGGCTGGGAGGACTCTT.....................................................................201.000.00----1.00----------------------------------------------------
..............................................................................................................................................................GGGGCTGGGCTGGGAGTC..........................................................................181.000.00------------------------------------------------1.00--------
........................................ATTGGAGAAGGTACCATGG...............................................................................................................................................................................................191.000.00---------------------------------------1.00-----------------
.................................................................................................................................................................................................................................TGGGGGACCAGGGACTTTG......191.000.00-------------1.00-------------------------------------------
.................................................................................................................................................................................................................................TGGGGGACCAGGGACTATG......191.000.00----------------------1.00----------------------------------

Antisense strand
CCCTGGCCTGGAGAGGGCCCCTGGCCTCCCTGAGCTGGACATTGGAGAAGGTACCACCCCACACACTTTCCCCTCACTGGGGGTCACTCTGCTGCTGAGCACCCCTCACTGCCAGGCTCTGCCCACCTAGACCCCCGCTTCGGCCTAACAGGGAGCTGGGGGCTGGGCTGGGAGGACTTGGCCATCTAGGGAGGAGGTGGGAGCTGGTGGCATTGTCTGGTGGGGTGGGGGACCAGGGACCCCACGGAGC
...............................................................................................((((.....))))..((((((..((.(((((((((.((((((((((..........))))).)))))))))).))))))..))))))....................................................................
.............................................................................................94.........................................................................................185...............................................................
SizePerfect hitTotal NormPerfect NormSRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040012(GSM532897)
G648N. (cervix)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444066(SRX128914)
Sample 23cDNABarcode: AF-PP-339: ACG CTC TTC . (cell line)
SRR040035(GSM532920)
G001T. (cervix)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
....................CTGGCCTCCCTGAGCAAAC................................................................................................................................................................................................................... 193.000.001.00-----------------1.00-----------------1.00--------------------
....................CTGGCCTCCCTGAGCTAAAC.................................................................................................................................................................................................................. 203.000.00--------------1.00-------------------1.00----------1.00-----------
............................................................................CTGGGGGTCACTCTGAAA............................................................................................................................................................ 181.000.00----------------------------------------------------1.00----
..............................................................................................................................................................GGGGCTGGGCTGGGAGGATGTT...................................................................... 221.000.00-----------------------------------------1.00---------------
.................CCCCTGGCCTCCCTGAGGGGT.................................................................................................................................................................................................................... 211.000.00-------------------------------1.00-------------------------
....................................................................................................................GGTCTAGGTGGGCAGAG..................................................................................................................... 1730.670.67--------------------------------------------------------0.67