ID: uc001ubi.4
GENE: SETD1B(5)
chr12:122251812-122252061+


(1)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(6)
B-CELL 		(8)
BRAIN 		(7)
BREAST 		(14)
CELL-LINE 		(1)
CERVIX 		(2)
HEART 		(4)
HELA 		(1)
LIVER 		(3)
OTHER 		(12)
SKIN 		(1)
XRN.ip

Sense strand
GAATTCTAGTGGTAACTCCATGAGGCAGGGACTATGATGCCCATTTTGCAAATGAAGACGCTGAGGCTTGGAGAGGCTGAATGGCTTGCACTGGGTCACACAGCTGGGAGTGCCACTGATTGCTAGTCTTGCAGAGGGGACTCCGAGAGCCCCTTGGCCTTCCAGACTCACCTCACTGTCTCTCCCTGCTCTCTCTGCAGGGCCAGCAGTCCTCAGGCGAGGACATGGAGATCTCGGATGACGAGATGCC
.................................................................................................................................((((((((((.....(((.(((....))))))..((((..........))))........))))))))))...................................................
............................................................................................................................125........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		TAX577740(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR038861(GSM458544)
MM466. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR189782SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR040035(GSM532920)
G001T. (cervix)
.................................................................................................................................TGCAGAGGGGACTCCGAGAGC....................................................................................................21131.0031.0011.005.00---4.003.001.00--------1.00--------1.00------1.00--1.00----------1.00----1.00---1.00-----
.................................................................................................................................TGCAGAGGGGACTCCGAGAGCC...................................................................................................22111.0011.007.00------1.00--2.00---------------------------------------------1.00----
.................................................................................................................................TGCAGAGGGGACTCCGAGAGTAA..................................................................................................2318.003.00--8.00----------------------------------------------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGAGCCA..................................................................................................2318.0011.005.001.00-------------------------1.00----------1.00----------------------
...................................................................................................................................................................................CTCTCCCTGCTCTCTCTGCAGA.................................................226.000.006.00------------------------------------------------------------
................................................................................................................................TTGCAGAGGGGACTCCGAGAGC....................................................................................................2216.006.00----5.00-----------1.00--------------------------------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGAGCA...................................................................................................2214.0031.00-----------------1.00--------1.00-----------------1.00-----1.00----------
...................................................................................................................................................................................CTCTCCCTGCTCTCTCTGCAGT.................................................224.000.00-----------2.00------------------------1.00----------------1.00-------
.......AGTGGTAACTCCATGAGGCAGGGACT.........................................................................................................................................................................................................................2613.003.00---3.00---------------------------------------------------------
.....................................................................................................................................................................................................................CAGGCGAGGACATGGAGATCTCT..............233.000.00-3.00-----------------------------------------------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGAG.....................................................................................................2013.003.00-------------------------------------1.00-----1.00---1.00-------------
................................................................................................................................TTGCAGAGGGGACTCCGAGAG.....................................................................................................2112.002.00--------2.00----------------------------------------------------
...........................................................................................................................................................................................................................AGGACATGGAGATCTCGGA............1912.002.00------------------1.00-----1.00------------------------------------
..................................................................................................................................GCAGAGGGGACTCCGAGAGC....................................................................................................2012.002.002.00------------------------------------------------------------
...........................................................................................................................................................................................................................AGGACATGGAGATCTCGGATGACGAG.....2612.002.00---------1.00--------------------1.00------------------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGAGA....................................................................................................2112.003.00--------1.00---------------------------------------1.00------------
.............................................................................................................................................................................................................................GACATGGAGATCTCGGATGAC........2112.002.00---2.00---------------------------------------------------------
.......................................................................................................................................GGGGACTCCGAGAGCC...................................................................................................1621.501.501.50------------------------------------------------------------
...............................................................................................................................................................................................................AGTCCTCAGGCGAGGACATGGAGATC.................2611.001.00----------------------------1.00--------------------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGAA.....................................................................................................2011.001.00-------------------------------------------------1.00-----------
.................................................................................................................................TGCAGAGGGGACTCCGAGCGC....................................................................................................211.000.00-----------------------------------------1.00-------------------
......................................................................................................................................AGGGGACTCCGAGAGCC...................................................................................................1711.001.001.00------------------------------------------------------------
............................................................................................................................................................................................................................GGACATGGAGATCTCGGA............1811.001.00--------------1.00----------------------------------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGA......................................................................................................1911.001.00----------------------------------------------------1.00--------
....TCTAGTGGTAACTCCATAGGC.................................................................................................................................................................................................................................211.000.00------------1.00------------------------------------------------
..........................................................................................................................................................................................................................GAGGACATGGAGATCTCGGATGACGAG.....2711.001.00---------------1.00---------------------------------------------
............................................................................................................................................................................................................................GGACATGGAGATCTCGGATGACGAG.....2511.001.00---1.00---------------------------------------------------------
.................................................................GCTTGGAGAGGCTGAGCTG......................................................................................................................................................................191.000.00---------1.00---------------------------------------------------
.....................................................................................................................................................................................................................CAGGCGAGGACATGGAGATCTCGGA............2511.001.00-----------------------------1.00-------------------------------
..................................................................................................................................................................................TCTCTCCCTGCTCTCTCTGCAGT.................................................231.000.00----------1.00--------------------------------------------------
......................................................................................................................................................................................................................AGGCGAGGACATGGAGATCTCGGA............2411.001.00---1.00---------------------------------------------------------
................................................................................................................................................................................................................................ATGGAGATCTCGGATGAC........1811.001.00--------------------1.00----------------------------------------
................................................................................................................................................................................................................GTCCTCAGGCGAGGACATGGAGATCT................2611.001.00---------1.00---------------------------------------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGAGCCT..................................................................................................2311.0011.00-----------------1.00-------------------------------------------
.................................................................................................................................................................................................................................TGGAGATCTCGGATGACG.......1811.001.00------------------------------------------1.00------------------
................................................................................................................................................................................................................GTCCTCAGGCGAGGACATGGAG....................2211.001.00-------------------1.00-----------------------------------------
................................................CAAATGAAGACGCTGAGGCTTG....................................................................................................................................................................................2211.001.00------------------------------------------------------1.00------
................................................................................................................................TTGCAGAGGGGACTCCGAGAGCC...................................................................................................2311.001.00---------------------------------------------1.00---------------
............................................................................................................................................................................................................AGCAGTCCTCAGGCGAGGACATGGAGATC.................2911.001.00-------1.00-----------------------------------------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGAGCCAA.................................................................................................2411.0011.00-------------1.00-----------------------------------------------
...................................................................TTGGAGAGGCTGAATATTG....................................................................................................................................................................191.000.00----------------------1.00--------------------------------------
..........................................................................................................................................................................CCTCACTGTCTCTCCCTGCTCTCTCTCTCT..................................................301.000.00--------------1.00----------------------------------------------
................................................................................................................................................................................................................................ATGGAGATCTCGGATGACGA......2011.001.00---------------1.00---------------------------------------------
................................................................................................................................TTGCAGAGGGGACTCCGAGA......................................................................................................2011.001.00-----------------------1.00-------------------------------------
.................................................................................................................................TGCAGAGGGGACTCCGAGAGAAAC.................................................................................................2411.003.00-------------1.00-----------------------------------------------
...............................................................................................................................................................................................................................CATGGAGATCTCGGATGAA........191.000.00-------------------------------1.00-----------------------------
...............................................................................................................................................................................................................AGTCCTCAGGCGAGGACATGGAG....................2311.001.00---------------------1.00---------------------------------------
..................................................................................................................................................................................................................................GGAGATCTCGGATGA.........1520.500.50---------------------------------------------------------0.50---
..................................................................................................................................................................................................................................GGAGATCTCGGATGAC........1620.500.50----------------------------------------------------------0.50--
.....................................................................................................................................................................................................................CAGGCGAGGACATGGAG....................1720.500.50------------------0.50------------------------------------------
.....................................................................................................................................................................................................................CAGGCGAGGACATGGA.....................1630.330.33-------------------0.33-----------------------------------------

Antisense strand
GAATTCTAGTGGTAACTCCATGAGGCAGGGACTATGATGCCCATTTTGCAAATGAAGACGCTGAGGCTTGGAGAGGCTGAATGGCTTGCACTGGGTCACACAGCTGGGAGTGCCACTGATTGCTAGTCTTGCAGAGGGGACTCCGAGAGCCCCTTGGCCTTCCAGACTCACCTCACTGTCTCTCCCTGCTCTCTCTGCAGGGCCAGCAGTCCTCAGGCGAGGACATGGAGATCTCGGATGACGAGATGCC
.................................................................................................................................((((((((((.....(((.(((....))))))..((((..........))))........))))))))))...................................................
............................................................................................................................125........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		TAX577740(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR189787GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR038861(GSM458544)
MM466. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR189782SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR040035(GSM532920)
G001T. (cervix)
......................................................................................................................ATTGCTAGTCTTGCATTAG................................................................................................................. 191.000.00------------1.00------------------------------------------------
............TAACTCCATGAGGCATGG............................................................................................................................................................................................................................ 181.000.00---------------------------------1.00---------------------------
...........................................................................................................................................................................................................................CTCGTCATCCGAGATCTCCATGTCCT..... 2611.001.00---------------------------------------1.00---------------------
.........................................................................................................................................................................................................GCCAGCAGTCCTCAGGTCTG............................. 201.000.00----------------------------------1.00--------------------------
........................................................................................................................................................CTTGGCCTTCCAGACCGGC............................................................................... 191.000.00----------------------------------------1.00--------------------
.......................................................................................................................................................GTCTGGAAGGCCAAGG................................................................................... 1650.200.20-----------------------------------------------------------0.20-
.......................................................................................................................................................CCTTGGCCTTCCAGACTG................................................................................. 180.200.00------------------------------------------------------------0.20