uc001uax.2_intron_3_0_chr12_122092340

AGAGTGGATCTCTGTCTAAAAACAAACAAACAAACAAAAAAGACAGGATACTCCGCTAAGACACGACCCTCCGCTTGGACGTAGGGCTGAGGAAGAAGGAAGAAGCTGGGGTGTGTGGCTCTAGGGGTGCCTGGGAAGACGGTGGGCTTTCCTGGTGGTGTTGGGGGGCGCCCTGAGTAGTAGCATCTTCGTACTTTCAGGGTTATGGGATCCAGTTTTTCGGACCCAAGGAGTATTATGAGGGTGACTG
.........................................................................................................(((((((.....)))))))((((((((((((((........)))))).............)))))))).............................................................................
...............................................................................................96...............................................................................177.......................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)

GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR189787

GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

TAX577580(Rovira)
total RNA. (breast)

GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)

TAX577744(Rovira)
total RNA. (breast)

SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

SRR040037(GSM532922)
G243T. (cervix)

SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)

SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)

SRR189785

SRR040007(GSM532892)
G601T. (cervix)

SRR040022(GSM532907)
G575N. (cervix)

TAX577590(Rovira)
total RNA. (breast)

SRR553576(SRX182782)
source: Testis. (testes)

SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

TAX577738(Rovira)
total RNA. (breast)

GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)

TAX577746(Rovira)
total RNA. (breast)

TAX577740(Rovira)
total RNA. (breast)

GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)

TAX577453(Rovira)
total RNA. (breast)

SRR040036(GSM532921)
G243N. (cervix)

SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)

....................................................................................................AGAAGCTGGGGTGTGTGGGGGT................................................................................................................................

7.50

0.50

1.00

0.50

1.00

0.50

1.00

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGGCGT................................................................................................................................

4.50

0.50

1.00

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGAGGT................................................................................................................................

4.50

0.50

1.50

0.50

1.00

0.50

....................................................................................................AGAAGCTGGGGTGTGTGTAGT.................................................................................................................................

3.00

0.00

1.00

....................................................................................................AGAAGCTGGGGTGTGAGGG...................................................................................................................................

2.00

0.00

1.00

....................................................................................................AGAAGCTGGGGTGTGTGGGGTT................................................................................................................................

2.00

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGGGGA................................................................................................................................

1.50

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGGCGA................................................................................................................................

1.50

0.50

.......................................................................................TGAGGAAGAAGGAAGAAGAGAT.............................................................................................................................................

1.00

0.00

1.00

.........................................................................................................................................................GGTGGTGTTGGGGGGCGGGC.............................................................................

1.00

0.00

1.00

....................................................................CTCCGCTTGGACGTAGGGC...................................................................................................................................................................

1.00

....................................................................................................AGAAGCTGGGGTGTGTGTGCG.................................................................................................................................

1.00

0.00

1.00

............................................................................................AAGAAGGAAGAAGCTGAGCG..........................................................................................................................................

1.00

0.00

1.00

.........................................................................................AGGAAGAAGGAAGAAGCGGCT............................................................................................................................................

1.00

0.00

1.00

....................................................................................................AGAAGCTGGGGTGTGTGAGA..................................................................................................................................

1.00

0.00

1.00

.......................................................................................TGAGGAAGAAGGAAGTATG................................................................................................................................................

1.00

0.00

1.00

.........................................................................................AGGAAGAAGGAAGAAGCG...............................................................................................................................................

1.00

0.00

1.00

....................................................................................................................................GGGAAGACGGTGGGCTAG....................................................................................................

1.00

0.00

1.00

....................................................................................................AGAAGCTGGGGTGTGTGTGTG.................................................................................................................................

1.00

0.00

1.00

....................................................................................................AGAAGCTGGGGTGTGTGTGGG.................................................................................................................................

1.00

0.00

1.00

.......................................................................................................................................................CTGGTGGTGTTGGGGGCA.................................................................................

1.00

0.00

1.00

.....................................................................................................GAAGCTGGGGTGTGTGGGCG.................................................................................................................................

1.00

0.00

1.00

....................................................................................................AGAAGCTGGGGTGTGTGTACT.................................................................................................................................

1.00

0.00

1.00

....................................................................................................AGAAGCTGGGGTGTGTGCACG.................................................................................................................................

1.00

0.00

1.00

....................................................................................................AGAAGCTGGGGTGTGTGG....................................................................................................................................

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGGTAT................................................................................................................................

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGTGGT................................................................................................................................

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGGG..................................................................................................................................

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGGTGA................................................................................................................................

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGTCGT................................................................................................................................

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGAGTA................................................................................................................................

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGGCGC................................................................................................................................

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGGGGG................................................................................................................................

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGGCT.................................................................................................................................

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGACGT................................................................................................................................

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGTGGG................................................................................................................................

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGGTGT................................................................................................................................

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGACGC................................................................................................................................

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGGCG.................................................................................................................................

0.50

....................................................................................................AGAAGCTGGGGTGTGTGGAGTT................................................................................................................................

0.50

........................................................................................GAGGAAGAAGGAAGAAGC................................................................................................................................................

0.20

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)

GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR189787

GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

TAX577580(Rovira)
total RNA. (breast)

GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)

TAX577744(Rovira)
total RNA. (breast)

SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

SRR040037(GSM532922)
G243T. (cervix)

SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)

SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)

SRR189785

SRR040007(GSM532892)
G601T. (cervix)

SRR040022(GSM532907)
G575N. (cervix)

TAX577590(Rovira)
total RNA. (breast)

SRR553576(SRX182782)
source: Testis. (testes)

SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

TAX577738(Rovira)
total RNA. (breast)

GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)

TAX577746(Rovira)
total RNA. (breast)

TAX577740(Rovira)
total RNA. (breast)

GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)

TAX577453(Rovira)
total RNA. (breast)

SRR040036(GSM532921)
G243N. (cervix)

SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)

...................AAACAAACAAACAAACAAAAAAGACGC............................................................................................................................................................................................................

4.00

0.00

4.00

..................AAAACAAACAAACAAACAAAAAAGACGAG...........................................................................................................................................................................................................

3.00

0.00

3.00

..................AAAACAAACAAACAAACAAAAAAGAAG.............................................................................................................................................................................................................

3.00

0.00

2.00

1.00

.................AAAAACAAACAAACAAACAAAAAAGACAGAG..........................................................................................................................................................................................................

2.00

0.00

2.00

.....................ACAAACAAACAAACAAAAAAGACTGT...........................................................................................................................................................................................................

2.00

0.00

2.00

...............CTAAAAACAAACAAACAAACAAAAAAGACG.............................................................................................................................................................................................................

2.00

0.00

2.00

....................AACAAACAAACAAACAAAAAAGACGTT...........................................................................................................................................................................................................

2.00

0.00

2.00

...................AAACAAACAAACAAACAAAAAAGCTAC............................................................................................................................................................................................................

2.00

0.00

2.00

..................AAAACAAACAAACAAACAAAAAAGAACT............................................................................................................................................................................................................

2.00

0.00

2.00

...................AAACAAACAAACAAACAAAAAAGACAGGT..........................................................................................................................................................................................................

2.00

0.00

2.00

......................CAAACAAACAAACAAAAAAGACA.............................................................................................................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................TTCCTGGTGGTGTTGCCGG...................................................................................

1.00

0.00

1.00

.......................AAACAAACAAACAAAAAAGACATCTT.........................................................................................................................................................................................................

1.00

0.00

1.00

..................AAAACAAACAAACAAACAAAAAAGAAGAG...........................................................................................................................................................................................................

1.00

0.00

1.00

...............CTAAAAACAAACAAACAAACAAACGG.................................................................................................................................................................................................................

1.00

0.00

1.00

.......................AAACAAACAAACAAAAAAGACATCGG.........................................................................................................................................................................................................

1.00

0.00

1.00

...............CTAAAAACAAACAAACAAACAAAAAAGAT..............................................................................................................................................................................................................

1.00

0.00

1.00

..................AAAACAAACAAACAAACAAAAAAGACACACC.........................................................................................................................................................................................................

1.00

0.00

1.00

.......................AAACAAACAAACAAAAAAGACATCTG.........................................................................................................................................................................................................

1.00

0.00

1.00

....................AACAAACAAACAAACAAAAAAGACACTC..........................................................................................................................................................................................................

1.00

0.00

1.00

..................AAAACAAACAAACAAACAAAAAAGCGAG............................................................................................................................................................................................................

1.00

0.00

1.00

..................AAAACAAACAAACAAACAAAAAAGACAC............................................................................................................................................................................................................

1.00

0.00

1.00

...................AAACAAACAAACAAACAAAAAAGACCGC...........................................................................................................................................................................................................

1.00

0.00

1.00

..................AAAACAAACAAACAAACAAAAAAGAGGC............................................................................................................................................................................................................

1.00

0.00

1.00

.....................ACAAACAAACAAACAAAAAAGACTG............................................................................................................................................................................................................

1.00

0.00

1.00

...................AAACAAACAAACAAACAAAAAAGACGGC...........................................................................................................................................................................................................

1.00

0.00

1.00

........................AACAAACAAACAAAAAAGACGGTT..........................................................................................................................................................................................................

1.00

0.00

1.00

.......................AAACAAACAAACAAAAAAGACATC...........................................................................................................................................................................................................

1.00

0.00

1.00

.................AAAAACAAACAAACAAACAAAAAAGACGAG...........................................................................................................................................................................................................

1.00

0.00

1.00

.................AAAAACAAACAAACAAACAAAAAAGCGAG............................................................................................................................................................................................................

1.00

0.00

1.00

..................AAAACAAACAAACAAACAAAAAAGACCCT...........................................................................................................................................................................................................

1.00

0.00

1.00

.....................ACAAACAAACAAACAAAAAAGCGTC............................................................................................................................................................................................................

1.00

0.00

1.00

...................AAACAAACAAACAAACAAAAAAGACCGG...........................................................................................................................................................................................................

1.00

0.00

1.00

..................AAAACAAACAAACAAACAAAAAAGAATC............................................................................................................................................................................................................

1.00

0.00

1.00

.....................ACAAACAAACAAACAAAAAAGACACTGC.........................................................................................................................................................................................................

1.00

0.00

1.00

...............CTAAAAACAAACAAACAAACAAACG..................................................................................................................................................................................................................

1.00

0.00

1.00

...................AAACAAACAAACAAACAAAAAAGACTCG...........................................................................................................................................................................................................

1.00

0.00

1.00

.....................ACAAACAAACAAACAAAAAAGAAGG............................................................................................................................................................................................................

1.00

0.00

1.00

.................AAAAACAAACAAACAAACAAAAAAGACTG............................................................................................................................................................................................................

1.00

0.00

1.00

...............CTAAAAACAAACAAACAAACAAACGA.................................................................................................................................................................................................................

1.00

0.00

1.00

..................AAAACAAACAAACAAACAAAAAAGAAGG............................................................................................................................................................................................................

1.00

0.00

1.00

...................AAACAAACAAACAAACAAAAAAGACAGGTT.........................................................................................................................................................................................................

1.00

0.00

1.00

.................................................CAAGCGGAGGGTCGTGTCTTAGCGGAGT.............................................................................................................................................................................

1.00

..................AAAACAAACAAACAAACAAAAAAGCCCC............................................................................................................................................................................................................

1.00

0.00

1.00

..................AAAACAAACAAACAAACAAAAAAGCTGC............................................................................................................................................................................................................

1.00

0.00

1.00

..................AAAACAAACAAACAAACAAAAAAGAGAGG...........................................................................................................................................................................................................

1.00

0.00

1.00

..................AAAACAAACAAACAAACAAAAAAGACACAA..........................................................................................................................................................................................................

1.00

0.00

1.00

...............CTAAAAACAAACAAACAAACAACG...................................................................................................................................................................................................................

1.00

0.00

1.00

...............CTAAAAACAAACAAACAAACAAAAAAGACAG............................................................................................................................................................................................................

1.00

0.00

1.00

.............................CCTGTCTTTTTTGTTTGT...........................................................................................................................................................................................................

0.17

.........................................................................................................................................................................................CTGAAAGTACGAAGA..................................................

0.14