ID: uc001tye.1_intron_12_0_chr12_120806077_r.3p
GENE: MSI1(2)
chr12:120806027-120806276-


(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(6)
B-CELL 		(11)
BRAIN 		(13)
BREAST 		(23)
CELL-LINE 		(11)
CERVIX 		(1)
FIBROBLAST 		(3)
HEART 		(2)
HELA 		(1)
KIDNEY 		(4)
LIVER 		(3)
OTHER 		(23)
SKIN 		(1)
TESTES 		(3)
UTERUS

Sense strand
CGGCTTCCCGGGGCCCCGGTGGGCGCCAGGAGGCTCAGCGGGAACGGGGCGAGGGCGGTGGGGGGCGGCGGCAGTGGAGAACGCGCGGGCAGCTTGGCGCGGGGGCGGCCGGGCCGCTCCGGGGTCACCGGGGGCAAAGGACGGGGGGGGGGGAAGGGCGCGGGGCCCGGGCTGGTCCGAAGGCGGGTGTGTGGTTACAGAAGGGCTGCGCGAATACTTCGGCCAGTTCGGGGAGGTGAAGGAGTGTCTG
..........................................................................................................................................((((.((..........((((.....))))...)).))))........................................................................
.........................................................................................................................................138..................................................191.........................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		TAX577738(Rovira)
total RNA. (breast)		GSM532876(GSM532876)
G547T. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577580(Rovira)
total RNA. (breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		TAX577590(Rovira)
total RNA. (breast)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM532880(GSM532880)
G659T. (cervix)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040039(GSM532924)
G531T. (cervix)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM532889(GSM532889)
G576N. (cervix)		SRR040040(GSM532925)
G612N. (cervix)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR037935(GSM510473)
293cand3. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189787SRR040028(GSM532913)
G026N. (cervix)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040038(GSM532923)
G531N. (cervix)		SRR038857(GSM458540)
D20. (cell line)		SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532886(GSM532886)
G850T. (cervix)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
.........................................................................................................................................................................GGCTGGTCCGAAGGCAGT...............................................................18167.005.00-3.004.00-5.003.00-4.002.003.00--1.00-2.00--1.001.003.003.001.00--2.002.002.00--2.00---1.001.00----2.00-------1.001.00---------1.00-1.001.00----1.00-----1.001.001.00-1.00--1.001.001.00--1.001.00-1.00-----1.001.00------1.00-------
..............................................................................................................................................GGGGGGGGGGGAAGGTATC.........................................................................................1958.000.0058.00------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCAG................................................................17128.005.00-3.004.00-2.001.00--3.00---2.00-1.002.001.00-2.001.00-------1.003.00-1.00--------------------------1.00---------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCAGTG..............................................................19121.005.00-2.001.00----2.00---4.00---------1.00----1.00--1.00-1.00----1.001.00-------1.00-1.001.00----1.00---------1.00---1.00-----------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCAGA...............................................................1816.005.00-3.00----------1.00------------------------------------1.00------------------------------------1.00----------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGC..................................................................1515.005.00-----1.00---------------------------------------1.00-------------------------------1.00-----------------1.00----1.00--------
..............................................................................................................................................GGGGGGGGGGGAAGGCATC.........................................................................................194.000.004.00------------------------------------------------------------------------------------------------------------
................................................................................................................................................GGGGGGGGGAAGGGCATC........................................................................................184.000.004.00------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCAGC...............................................................1814.005.00--1.00-1.00------------1.00----------------------1.00--------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCAGGG..............................................................1913.005.00---------1.00-1.00-----------------------------------------------------------1.00-------------------------------------
..................................................................................................GCGGGGGCGGCCGGG.........................................................................................................................................1502.002.00------------------------------------------------------------------------------------------------1.00--1.00---------
.........................................................................................................................................................................GGCTGGTCCGAAGGCAGTC..............................................................1912.005.00-------------------------------------1.00--1.00--------------------------------------------------------------------
...............................................................................................................................................GGGGGGGGGGAAGGGCATC........................................................................................192.000.002.00------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................GGGCTGGTCCGAAGGTA.................................................................172.000.00-----------------1.00--------------1.00----------------------------------------------------------------------------
.......................................................................................................................................AAAGGACGGGGGGGGGGGCA...............................................................................................202.000.00-------------1.00-----------------1.00-----------------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCA.................................................................1612.005.00-----1.00----------------------------------------1.00--------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCTGT...............................................................1812.005.00--1.00--------------1.00-------------------------------------------------------------------------------------------
....................................................................................................................................................GGGGGAAGGGCGCGGGCAA...................................................................................192.000.00------------------------------------------2.00------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCAGG...............................................................1812.005.00-----1.00-------------------------------------1.00-----------------------------------------------------------------
..............................................................................................................................................GGGGGGGGGGGAAGGAATC.........................................................................................192.000.002.00------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................CGGCCAGTTCGGGGAGGTGAAG.........2211.001.00-----------------------------------1.00-------------------------------------------------------------------------
..............................................................................................................................................GGGGGGGGGGGAAGGCTCG.........................................................................................191.000.00---1.00---------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCTGA...............................................................1811.005.00--------------------------------------------------------------------------------------------1.00----------------
.......................................................................................................................................AAAGGACGGGGGGGGGGGGAA..............................................................................................211.000.00-------------1.00-----------------------------------------------------------------------------------------------
..............................................................................................................................................GGGGGGGGGGGAAGGGACAG........................................................................................201.000.00-----------------------------------------1.00-------------------------------------------------------------------
.................................................................................................................................................GGGGGGGGAAGGGCGAGGG......................................................................................191.000.00---1.00---------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCGGGTGGGGT.........................................................241.000.00------------------------1.00------------------------------------------------------------------------------------
..............................AGGCTCAGCGGGAACGG...........................................................................................................................................................................................................1711.001.00------------------------------------------------------------------------------------------1.00------------------
.................................................................................................................................................................GGGGCCCGGGCTGGTAAG.......................................................................181.000.00-------------------------------------------------------------------------------------------------------1.00-----
..............................................................................................................................................GGGGGGGGGGGAAGGCCGT.........................................................................................191.000.00----------------------------------------------------------------------------------1.00--------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCAT................................................................1711.005.00-----------------------1.00-------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................GGGGAGGTGAAGGAGTGTGTAT221.000.00--------------------------------------------------------------1.00----------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCTG................................................................1711.005.00----------------1.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCATG...............................................................1811.005.00---------------1.00---------------------------------------------------------------------------------------------
.......................................................................................................................................AAAGGACGGGGGGGGGGGGCA..............................................................................................211.000.00-------------1.00-----------------------------------------------------------------------------------------------
................................................................................................................................................GGGGGGGGGAAGGGCTG.........................................................................................171.000.00---1.00---------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCCG................................................................1711.005.00-1.00-----------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCCGG...............................................................1811.005.00-----------------------1.00-------------------------------------------------------------------------------------
.......................................................................................................................................AAAGGACGGGGGGGGGAGGA...............................................................................................201.000.00---------------------------------------------------1.00---------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCGGTCG.............................................................201.000.00------------------------------------1.00------------------------------------------------------------------------
................................................................................................................................................GGGGGGGGGAAGGGCTGT........................................................................................181.000.00---1.00---------------------------------------------------------------------------------------------------------
......................................................GCGGTGGGGGGCGGCGGC..................................................................................................................................................................................1811.001.00-------------------------------------------------------------------------------------------------1.00-----------
......................................................................................................................................................................CCGGGCTGGTCCGAAGGTAGT...............................................................211.000.00----1.00--------------------------------------------------------------------------------------------------------
..............CCCGGTGGGCGCCAGTCG..........................................................................................................................................................................................................................181.000.00---------1.00---------------------------------------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCAAT...............................................................1811.005.00-------------------------1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCCAGC..............................................................1911.005.00----------------------------------------------------------------1.00--------------------------------------------
..............................................................................................................................................................................GTCCGAAGGCGGGTGTGTGGTTA.....................................................2311.001.00----------------------------------------------------------------------1.00--------------------------------------
.............................................................................................................................................CGGGGGGGGGGGAAGGGTC..........................................................................................191.000.00----------------------1.00--------------------------------------------------------------------------------------
................................................................................................................................................GGGGGGGGGAAGGGCGGGGG......................................................................................201.000.00--------------------------------------1.00----------------------------------------------------------------------
...................................................................................................................................GGGCAAAGGACGGGGCAGA....................................................................................................191.000.00--------------------------------------------------------1.00----------------------------------------------------
................................................................................................................................................GGGGGGGGGAAGGGCGCGGGGGGC..................................................................................241.000.00---1.00---------------------------------------------------------------------------------------------------------
......................................................GCGGTGGGGGGCGGCGGCGGC...............................................................................................................................................................................2111.001.00-----------------------------------------------------------------1.00-------------------------------------------
.....................................................................................................................................................................................GGCGGGTGTGTGGTTAAAA..................................................191.000.00-------------------------------------------1.00-----------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCCGT...............................................................1811.005.00-----------------------------------1.00-------------------------------------------------------------------------
.............................................................................AGAACGCGCGGGCAGCTTGGCGCGGGGGCGGC.............................................................................................................................................3211.001.00---------------------1.00---------------------------------------------------------------------------------------
..........................................................................................................................................GGACGGGGGGGGGGGTC...............................................................................................171.000.00---1.00---------------------------------------------------------------------------------------------------------
....................................................................................................GGGGGCGGCCGGGCCGCG....................................................................................................................................181.000.00--------------------------------------------------------------------------------------------------1.00----------
.................................................................................................................................................GGGGGGGGAAGGGCGCATAG.....................................................................................201.000.00-----------------------------------------1.00-------------------------------------------------------------------
.....................................................GGCGGTGGGGGGCGGCGT...................................................................................................................................................................................181.000.00------1.00------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCAAG...............................................................1811.005.00-1.00-----------------------------------------------------------------------------------------------------------
.......................................................................................................................................AAAGGACGGGGGGGGGGGGGAT.............................................................................................221.000.00-------------1.00-----------------------------------------------------------------------------------------------
..........................................................................................................................................GGACGGGGGGGGGGGC................................................................................................161.000.00---------------------------------1.00---------------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCAGTT..............................................................1911.005.00-----------------------1.00-------------------------------------------------------------------------------------
...........................................................................................................................................GACGGGGGGGGGGGAGGG.............................................................................................181.000.00----------------------------------------------1.00--------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCAGCG..............................................................1911.005.00--------------------1.00----------------------------------------------------------------------------------------
................................................................................................................................................GGGGGGGGGAAGGGCGGG........................................................................................181.000.00---1.00---------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCATTA..............................................................1911.005.00-----------------------------------------------------------------------------------1.00-------------------------
.............................................................GGGGCGGCGGCAGTGGTC...........................................................................................................................................................................181.000.00---------------------------------------------------------------------------1.00---------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCAGGT..............................................................1911.005.00---------------1.00---------------------------------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCACGG..............................................................1911.005.00-----------------------------------------------------------------------------------------1.00-------------------
.......................................................................................................................................AAAGGACGGGGGGGGGGGGA...............................................................................................201.000.00-------------------------------------------------------------------------------------------1.00-----------------
................................................................................................................................................GGGGGGGGGAAGGGCTTG........................................................................................181.000.00---1.00---------------------------------------------------------------------------------------------------------
............................................................................................................................................................GGCGCGGGGCCCGGGTC.............................................................................171.000.00----------------------1.00--------------------------------------------------------------------------------------
.........................................................................................................................................................................GGCTGGTCCGAAGGCGGTGAG............................................................211.000.00--------1.00----------------------------------------------------------------------------------------------------
................................................................................................................................................GGGGGGGGGAAGGGCGGGG.......................................................................................191.000.00---1.00---------------------------------------------------------------------------------------------------------
.......................................................................................................................................AAAGGACGGGGGGGGGGGGGT..............................................................................................211.000.00------------------------------1.00------------------------------------------------------------------------------
..................................................GAGGGCGGTGGGGGGCTGCG....................................................................................................................................................................................201.000.00--------------------------------------------------------------------1.00----------------------------------------
.......................................................................................................................................AAAGGACGGGGGGGGGG..................................................................................................1730.670.67-------------------------------0.33------------------------------------------------------------------------0.33----
......CCCGGGGCCCCGGTG.....................................................................................................................................................................................................................................1530.330.33------0.33------------------------------------------------------------------------------------------------------
..............................................................................................................................................GGGGGGGGGGGAAGGGC...........................................................................................1730.330.33---0.33---------------------------------------------------------------------------------------------------------
.......................................................................................................................................AAAGGACGGGGGGGGGGACA...............................................................................................2030.330.67------------------------------0.33------------------------------------------------------------------------------
.......................................................................................................................................AAAGGACGGGGGGGGGGTGA...............................................................................................2030.330.67-------------------------------------------------0.33-----------------------------------------------------------
..............................................................................................................................................GGGGGGGGGGGAAGGGCATC........................................................................................2030.330.330.33------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................GGGCCCGGGCTGGTC.........................................................................1530.330.33----------------------------------------------------------------------------------------------------------0.33--
.......................................................................................................................................AAAGGACGGGGGGGGGGTGG...............................................................................................2030.330.67--------------------------------------------------------------------------------------------------------0.33----
.......................................................................................................................................AAAGGACGGGGGGGGGGAAG...............................................................................................2030.330.67---------------------------------------------------0.33---------------------------------------------------------
.......CCGGGGCCCCGGTGG....................................................................................................................................................................................................................................1530.330.33---------------------------------------------------------------------------------------------------------0.33---
...................................................................................................................................................................................AAGGCGGGTGTGTGG........................................................1540.250.25---------------------0.25---------------------------------------------------------------------------------------
........................................................GGTGGGGGGCGGCGGC..................................................................................................................................................................................1680.120.12-----------------------------------------------------------------------------------------------------------0.12-
............................................................................................................................................ACGGGGGGGGGGGAA...............................................................................................1580.120.12------0.12------------------------------------------------------------------------------------------------------
......................................................GCGGTGGGGGGCGGC.....................................................................................................................................................................................1590.110.11------------------------------------------------------------------------------------------------------------0.11

Antisense strand
CGGCTTCCCGGGGCCCCGGTGGGCGCCAGGAGGCTCAGCGGGAACGGGGCGAGGGCGGTGGGGGGCGGCGGCAGTGGAGAACGCGCGGGCAGCTTGGCGCGGGGGCGGCCGGGCCGCTCCGGGGTCACCGGGGGCAAAGGACGGGGGGGGGGGAAGGGCGCGGGGCCCGGGCTGGTCCGAAGGCGGGTGTGTGGTTACAGAAGGGCTGCGCGAATACTTCGGCCAGTTCGGGGAGGTGAAGGAGTGTCTG
..........................................................................................................................................((((.((..........((((.....))))...)).))))........................................................................
.........................................................................................................................................138..................................................191.........................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		TAX577738(Rovira)
total RNA. (breast)		GSM532876(GSM532876)
G547T. (cervix)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577580(Rovira)
total RNA. (breast)		SRR040037(GSM532922)
G243T. (cervix)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		TAX577590(Rovira)
total RNA. (breast)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM532880(GSM532880)
G659T. (cervix)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR040039(GSM532924)
G531T. (cervix)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM532889(GSM532889)
G576N. (cervix)		SRR040040(GSM532925)
G612N. (cervix)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR037935(GSM510473)
293cand3. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189787SRR040028(GSM532913)
G026N. (cervix)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040038(GSM532923)
G531N. (cervix)		SRR038857(GSM458540)
D20. (cell line)		SRR189786GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532886(GSM532886)
G850T. (cervix)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
..................................................................................................................................................GGGGGGGAAGGGCGCTTCT..................................................................................... 197.000.00----------3.00---------------------------------2.00----------1.00-------------1.00---------------------------------------
............................................................................................................CCGGGCCGCTCCGGGGGGA........................................................................................................................... 192.000.00-2.00-----------------------------------------------------------------------------------------------------------
.........................................................................................................................................AGGACGGGGGGGGGGGCC............................................................................................... 181.000.00---------------------------1.00---------------------------------------------------------------------------------
.................GGTGGGCGCCAGGAGGC........................................................................................................................................................................................................................ 171.000.00--------------------------------1.00----------------------------------------------------------------------------
........................................................GGTGGGGGGCGGCGGCAGC............................................................................................................................................................................... 191.000.00--------------1.00----------------------------------------------------------------------------------------------
.........................................................GTGGGGGGCGGCGGCAC................................................................................................................................................................................ 171.000.00------1.00------------------------------------------------------------------------------------------------------
.............................................................................................................................................CGGGGGGGGGGGAAGGGGGC......................................................................................... 201.000.00-----------------------------------------------------------1.00-------------------------------------------------
...............................................................................................................................................GGGGGGGGGGAAGGGGG.......................................................................................... 171.000.00----------------------------------------------------1.00--------------------------------------------------------
..................................................................................................................................................GGGGGGGAAGGGCGCTTAA..................................................................................... 191.000.00----------1.00--------------------------------------------------------------------------------------------------
.................................................................................................CGCGGGGGCGGCCGGGCA....................................................................................................................................... 181.000.00------------------------------------------------------------------------------------------------------1.00------
..................................................................................................................................................GGGGGGGAAGGGCGCTTT...................................................................................... 181.000.00----------1.00--------------------------------------------------------------------------------------------------
.........................................................GTGGGGGGCGGCGGCACAC.............................................................................................................................................................................. 191.000.00--------------------------------------1.00----------------------------------------------------------------------
...................................................................................................................................................CCCCGCGCCCTTCCCCCC..................................................................................... 1811.001.00------------------------------------------------------1.00------------------------------------------------------
..........................................................................................................................................GGACGGGGGGGGGGGGCCC............................................................................................. 191.000.00------------------------------------------------------------------------------1.00------------------------------
...................................................................................................CGGGGGCGGCCGGGCCTGT.................................................................................................................................... 191.000.00---------------------------1.00---------------------------------------------------------------------------------
..................................................................................................................................................GGGGGGGAAGGGCGCTTC...................................................................................... 181.000.00----------------------------------------------------------------------------------------1.00--------------------
.................................................................................................................................................GGGGGGGGAAGGGCGGGC....................................................................................... 181.000.00----------------------------------1.00--------------------------------------------------------------------------
................................................GCGAGGGCGGTGGGGGGAA....................................................................................................................................................................................... 191.000.00------------1.00------------------------------------------------------------------------------------------------
.............................................GGGGCGAGGGCGGTGACC........................................................................................................................................................................................... 181.000.00----------------1.00--------------------------------------------------------------------------------------------
...............................................................................................................................................GGGGGGGGGGAAGGGGGAA........................................................................................ 191.000.00------1.00------------------------------------------------------------------------------------------------------
.............................................................................................TTGGCGCGGGGGCGGCCGT.......................................................................................................................................... 191.000.00----------------1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................GGGGGGGGAAGGGCGGCCT...................................................................................... 191.000.00------------------1.00------------------------------------------------------------------------------------------
......................................................................................................................CCGGGGTCACCGGGGGCGG................................................................................................................. 191.000.00------1.00------------------------------------------------------------------------------------------------------
.........................................................GTGGGGGGCGGCGGCA................................................................................................................................................................................. 161.000.00------1.00------------------------------------------------------------------------------------------------------
..........................................................TGGGGGGCGGCGGCAGTGGAAG.......................................................................................................................................................................... 221.000.00--------------------------------------------------1.00----------------------------------------------------------
.......................................................................................................GGCGGCCGGGCCGCTCCGC................................................................................................................................ 191.000.00----------------------1.00--------------------------------------------------------------------------------------
......................................................GCGGTGGGGGGCGGCGGCGGCG.............................................................................................................................................................................. 2211.000.00------1.00------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCCTTCCCCCCCCCCCG............................................................................................ 1730.330.33----------------------------------------------------0.33--------------------------------------------------------
...........................................................ACTGCCGCCGCCCCCC............................................................................................................................................................................... 1630.330.33--------------------------------------------------0.33----------------------------------------------------------
........................................................GCCGCCGCCCCCCACC.................................................................................................................................................................................. 1680.120.12------0.12------------------------------------------------------------------------------------------------------