ID: uc001tux.2_intron_19_0_chr12_113724900_f.3p
GENE: (20)
chr12:113725768-113726017+


(2)
AGO2.ip
(4)
B-CELL
(4)
BRAIN
(5)
BREAST
(20)
CELL-LINE
(3)
HEART
(5)
LIVER
(2)
OTHER
(5)
SKIN
(1)
UTERUS

Sense strand
GCCACCATCCCTTCCCTCATGCATGAATCACCTGAGCCCAGCTCAGGGTTGGTGGCGCCCAAGGGAGTGGACGCAGGTGGAGGAGAGGCCCTCACCTGTCTTCACCGCATGGCGTGTGGAAGGCGGGGCCGGCATGTTCTGAGGGCGGGGGCTGAGGCGTGCACCTGTGTGTGGAGGTGACGGGTGTCCTCCTCGCTCAGGTTGTTTAAGTTGAAGGAGCGCTACCGCAACGTGCTGGACACCATGTTCG
..............................................................................................................................................(((((((((..((.((.(((((((........))))).)).)).)).)))))))))....................................................
..............................................................................................................................................143......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
TAX577740(Rovira)
total RNA. (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR189784SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR189782SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR038854(GSM458537)
MM653. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577589(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
...................................................................................................................................................GGGGCTGAGGCGTGCACCTGTG.................................................................................2216.006.00-------2.001.00----------1.00-----------------------1.00---1.00---
...................................................................................................................................................GGGGCTGAGGCGTGCACCTGTGT................................................................................2316.006.00--2.00--------1.00-1.00------------1.00------1.00-----------------
...................................................................................................................................................GGGGCTGAGGCGTGCACCTGTGA................................................................................2315.006.00----2.00----------------1.00--1.00----------------1.00---------
....................................................................................................................................................................................CGGGTGTCCTCCTCGCTCAGA.................................................213.000.00-----------------------------------1.00--1.00---------1.00--
..................................................................................................................................................GGGGGCTGAGGCGTGCACCTGTG.................................................................................2312.002.00---------2.00-----------------------------------------
..................................................................................................................................................GGGGGCTGAGGCGTGCACCTGTT.................................................................................2312.001.00-----------------------1.00------------1.00--------------
...................................................................................................................................................GGGGCTGAGGCGTGCACCTGTGTA...............................................................................2412.006.00-2.00-------------------------------------------------
................................................................................................................................................................................................................AGTTGAAGGAGCGCTACCGCAA....................2212.002.002.00--------------------------------------------------
..................................................................................................................................................GGGGGCTGAGGCGTGCACCTGA..................................................................................2211.001.00----------------------1.00----------------------------
....................................................................................................................................................................................CGGGTGTCCTCCTCGCTCAGT.................................................211.000.00--------------------1.00------------------------------
..................................................................................................................................................................................................................TTGAAGGAGCGCTACCGCAACG..................2211.001.00--------1.00------------------------------------------
..................................................................................................................................GGCATGTTCTGAGGGCG.......................................................................................................1711.001.00-------------------------------------1.00-------------
...................................................................................................................................................GGGGCTGAGGCGTGCACCTGTTA................................................................................231.000.001.00--------------------------------------------------
...............................................................................................................................................................................................................AAGTTGAAGGAGCGCTACC........................1911.001.001.00--------------------------------------------------
...................................................................................................................................................GGGGCTGAGGCGTGCACCTGTGTTT..............................................................................2511.006.00-------------------------------1.00-------------------
...................................................................................................................................................GGGGCTGAGGCGTGCACCTGTAA................................................................................231.000.00-----1.00---------------------------------------------
...........................................................................................................................................TGAGGGCGGGGGCTGTGTG............................................................................................191.000.00---1.00-----------------------------------------------
..................................................................................................................................................GGGGGCTGAGGCGTGCACCTG...................................................................................2111.001.00------------------1.00--------------------------------
...........................................................................................................CATGGCGTGTGGAAGGCGGGGCCGG......................................................................................................................2511.001.00---------------------------------------1.00-----------
......................................................................ACGCAGGTGGAGGAGAGGAGG...............................................................................................................................................................211.000.00--------------------------------1.00------------------
.................................................................................................................................................CGGGGGCTGAGGCGTTA........................................................................................171.000.00----------------------------------------1.00----------
.............................................................AGGGAGTGGACGCAGGTGG..........................................................................................................................................................................1911.001.00-----------------1.00---------------------------------
.................................................................................GGAGAGGCCCTCACCTGT.......................................................................................................................................................1811.001.001.00--------------------------------------------------
...................................................................................................................................................GGGGCTGAGGCGTGCACCTGTAT................................................................................231.000.00----------------------------------1.00----------------
.............................................................................................................................................AGGGCGGGGGCTGAGGAA...........................................................................................181.000.00------------------------------1.00--------------------
..................................................................................................................................................GGGGGCTGAGGCGTGCACATGT..................................................................................221.000.00----------1.00----------------------------------------
.....................................................................................................................................................................................GGGTGTCCTCCTCGCTCAGA.................................................201.000.00--------------------------------------------1.00------
...........................................................................................................................................TGAGGGCGGGGGCTGAGGCGTGCACCT....................................................................................2711.001.00-----1.00---------------------------------------------
..................................................................................................................................................GGGGGCTGAGGCGTGCACCTGTAA................................................................................2411.001.00------1.00--------------------------------------------
..................................................................GTGGACGCAGGTGGAGGAGA....................................................................................................................................................................2011.001.00---1.00-----------------------------------------------
..................................................................................................................................................GGGGGCTGAGGCGTGCACCTGT..................................................................................2211.001.00----------------------------------------------1.00----
...........................................................................................................................................TGAGGGCGGGGGCTGATTGG...........................................................................................201.000.00------------1.00--------------------------------------
...................................................................................................................................................GGGGCTGAGGCGTGCACCT....................................................................................1911.001.00----------------------------1.00----------------------
..................................................................................................................................................GGGGGCTGAGGCGTGCACCTGTAG................................................................................2411.001.00--1.00------------------------------------------------
..........................................................................................................GCATGGCGTGTGGAAGGCGGGGCC........................................................................................................................2411.001.00----------1.00----------------------------------------
...................................................................................................................................................GGGGCTGAGGCGTGCACCTGTTTA...............................................................................241.000.00-1.00-------------------------------------------------
...................................................................................................................................................GGGGCTGAGGCGTGCACCTGTA.................................................................................221.000.00----------------1.00----------------------------------
..............................................................................................................................................................................................................TAAGTTGAAGGAGCGCTACC........................2011.001.00------------------------------------------1.00--------
..................................................................................................................................................GGGGGCTGAGGCGTGCACCTGTGT................................................................................2411.001.00---------------------------1.00-----------------------
...........................................................................................................................................TGAGGGCGGGGGCTGAGGCGTGCACC.....................................................................................2611.001.00-1.00-------------------------------------------------
.................................................................................................................................................CGGGGGCTGAGGCGTGCACCTGT..................................................................................2311.001.00-------------------------------------------------1.00-
........................GAATCACCTGAGCCCA..................................................................................................................................................................................................................1601.001.00---------------------------------------------1.00-----

Antisense strand
GCCACCATCCCTTCCCTCATGCATGAATCACCTGAGCCCAGCTCAGGGTTGGTGGCGCCCAAGGGAGTGGACGCAGGTGGAGGAGAGGCCCTCACCTGTCTTCACCGCATGGCGTGTGGAAGGCGGGGCCGGCATGTTCTGAGGGCGGGGGCTGAGGCGTGCACCTGTGTGTGGAGGTGACGGGTGTCCTCCTCGCTCAGGTTGTTTAAGTTGAAGGAGCGCTACCGCAACGTGCTGGACACCATGTTCG
..............................................................................................................................................(((((((((..((.((.(((((((........))))).)).)).)).)))))))))....................................................
..............................................................................................................................................143......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
TAX577740(Rovira)
total RNA. (breast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR189784SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR189782SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR038854(GSM458537)
MM653. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577589(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
..............................................................................................................................GGCCGGCATGTTCTGAAGA......................................................................................................... 191.000.00-----------------------------1.00---------------------
.......................................................................................................................................GTTCTGAGGGCGGGGTCTG................................................................................................ 191.000.00--------------1.00------------------------------------
.................................................................................................................................................................................................................................CGCAACGTGCTGGACAATG...... 191.000.00-------------------------1.00-------------------------
............................................................................................CCACACGCCATGCGGTGAAGACAGGTG................................................................................................................................... 2711.001.00---------------1.00-----------------------------------
......................................................................................................................................TGTTCTGAGGGCGGGGACG................................................................................................. 191.000.00------1.00--------------------------------------------
...........................................................................GGGCCTCTCCTCCACC............................................................................................................................................................... 1650.200.20--------------------------------------------------0.20