ID: uc001tob.50
GENE: ACACB(51)
chr12:109703036-109703243+


(1)
AGO1.ip 		(1)
AGO2.ip 		(3)
BREAST 		(12)
CELL-LINE 		(1)
CERVIX 		(5)
HEART 		(2)
HELA 		(9)
LIVER 		(1)
OTHER 		(3)
SKIN

Sense strand
TCCAGTCCATGCTGCGTCGCTGGTTCGTGGAGACGGAGGGGGCTGTCAAGGTGGGCCTGGGGTGAGAACGAGGCCGGTGAGCACAGGGGGTGCTGGGGGCTGAGACAGCTGGCCCACAGCTGGGTCCCTCTCTGAGGCATCCTCTGCCCCCTCCCCAGGCCTACTTGTGGGACAACAACCAGGTGGTTGTGCAGTGGCTGGAACAGCA
...................................................((((...((((..........((......)).((((((((((((((((((....((((((.....)))))))))))))......))))))))))).))))..))))...................................................
..................................................51.........................................................................................................158................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		TAX577590(Rovira)
total RNA. (breast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR343335TAX577738(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189783SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
.........................................................................................................................................CATCCTCTGCCCCCTCCCCAGT.................................................2219.002.00--1.00--3.00-1.00--2.00----1.00-----1.00-----------------
.........................................................................................................................................CATCCTCTGCCCCCTCCCCAGA.................................................2217.002.001.00-1.00-3.00-------------1.00-----------1.00--------
..................................................GTGGGCCTGGGGTGAGAACGAG........................................................................................................................................2213.003.00---3.00-----------------------------------
.........................................................................................................................................CATCCTCTGCCCCCTCCCCA...................................................2013.003.003.00--------------------------------------
.............GCGTCGCTGGTTCGTTT..................................................................................................................................................................................172.000.00-----------2.00---------------------------
..........................GTGGAGACGGAGGGGGCTGTCAAG..............................................................................................................................................................2412.002.00------------2.00--------------------------
..................................................GTGGGCCTGGGGTGAGAACGAGGCCGG...................................................................................................................................2712.002.00-------------------1.00---------1.00---------
....................................................................................................................................................................................AGGTGGTTGTGCAGTGGCT.........1912.002.00-2.00-------------------------------------
.........................................................................................................................................CATCCTCTGCCCCCTCCCCAG..................................................2112.002.001.00---------------------1.00----------------
................................................................................................................................................................................AACCAGGTGGTTGTGCAGTG............2012.002.00-2.00-------------------------------------
...................................................................................................................................................................................CAGGTGGTTGTGCAGATAA..........192.000.00---------2.00-----------------------------
..........................................................................CGGTGAGCACAGGGGG......................................................................................................................1621.501.50-----------------------------------0.500.500.50-
.......................................................................GGCCGGTGAGCACAGTAGA......................................................................................................................191.000.00--------1.00------------------------------
...................CTGGTTCGTGGAGACGGAGGGGG......................................................................................................................................................................2311.001.00-1.00-------------------------------------
................................................................................................................................................................................AACCAGGTGGTTGTGCAGTGGC..........2211.001.00----------------------------------1.00----
............TGCGTCGCTGGTTCGTGGAGACGGAGGGG.......................................................................................................................................................................2911.001.00-------1.00-------------------------------
.......................................................................................................................................................................................TGGTTGTGCAGTGGCTTC.......181.000.00-------------------------1.00-------------
..................................................GTGGGCCTGGGGTGAGAACGA.........................................................................................................................................2111.001.00------------------------1.00--------------
..................................................GTGGGCCTGGGGTGAGAACGAGGCCGGTGAGCACAGGGGGTGCTGGGGGCTGAGACAGCTGGCCCACAGCTGGGTCCCTCTCTG..........................................................................8411.001.00---------------------------------1.00-----
.........................................................................................................................................CATCCTCTGCCCCCTCCCCAGTAT...............................................2411.002.00--------------1.00------------------------
.........................................................................................................................................CATCCTCTGCCCCCTCCCCAGATA...............................................2411.002.00--------------------------------1.00------
........ATGCTGCGTCGCTGGTTCGTGGAGAC..............................................................................................................................................................................2611.001.00--1.00------------------------------------
..................GCTGGTTCGTGGAGACGGAG..........................................................................................................................................................................2011.001.00-1.00-------------------------------------
.........................................................................................................................................CATCCTCTGCCCCCTCCCCAGAT................................................2311.002.001.00--------------------------------------
..........................................................................................................................................ATCCTCTGCCCCCTCCCCAGT.................................................211.000.00-----------------1.00---------------------
..................................................GTGGGCCTGGGGTGAGAACGAGG.......................................................................................................................................2311.001.00--------------------1.00------------------
.................................................................................................................................................................................ACCAGGTGGTTGTGCAGTG............1911.001.00-1.00-------------------------------------
...................CTGGTTCGTGGAGACGGAG..........................................................................................................................................................................1911.001.00--------------------------1.00------------
..............................................................................................................................................................................ACAACCAGGTGGTTGGC.................171.000.00-------------1.00-------------------------
............................................................................................................................TCCCTCTCTGAGGCATCCTCTGT.............................................................231.000.00-------------------------------1.00-------
.........................................................................................................................................CATCCTCTGCCCCCTCCCCAGATT...............................................2411.002.00--1.00------------------------------------
.........................................................................................................................................CATCCTCTGCCCCCTCCCCAGTAG...............................................2411.002.001.00--------------------------------------
.........................................................................................................................................CATCCTCTGCCCCCTCCCCAGTAA...............................................2411.002.001.00--------------------------------------
.......................................................................................GGGTGCTGGGGGCTGACT.......................................................................................................181.000.00----------------1.00----------------------
.........................................................................................................................................CATCCTCTGCCCCCTCCCCACA.................................................2211.003.00---------------------------1.00-----------
..........................................................................CGGTGAGCACAGGGGA......................................................................................................................1650.200.20-----------------------------------0.20---
..........................................................................CGGTGAGCACAGGGG.......................................................................................................................1550.200.20-------------0.20-------------------------
.....................................................................................................................................................................TGTGGGACAACAACC............................1570.140.14--------------------------------------0.14

Antisense strand
TCCAGTCCATGCTGCGTCGCTGGTTCGTGGAGACGGAGGGGGCTGTCAAGGTGGGCCTGGGGTGAGAACGAGGCCGGTGAGCACAGGGGGTGCTGGGGGCTGAGACAGCTGGCCCACAGCTGGGTCCCTCTCTGAGGCATCCTCTGCCCCCTCCCCAGGCCTACTTGTGGGACAACAACCAGGTGGTTGTGCAGTGGCTGGAACAGCA
...................................................((((...((((..........((......)).((((((((((((((((((....((((((.....)))))))))))))......))))))))))).))))..))))...................................................
..................................................51.........................................................................................................158................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		TAX577590(Rovira)
total RNA. (breast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR343335TAX577738(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189783SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
............................................................................................................................TCCCTCTCTGAGGCAACCA................................................................. 192.000.00------2.00--------------------------------
...................................................................................................................................................................................CACTGCACAACCACCTG............ 1721.001.00----------------------------1.00----------
.......................................................................GGCCGGTGAGCACAGGGCCGC.................................................................................................................... 211.000.00--------1.00------------------------------
............................................................................................................................TCCCTCTCTGAGGCAACAA................................................................. 191.000.00-----------------------1.00---------------