ID: uc001tmy.1_intron_8_0_chr12_108930349_r
GENE: SART3(3)
chr12:108930299-108930533-


(2)
AGO2.ip
(9)
B-CELL
(3)
BRAIN
(42)
BREAST
(33)
CELL-LINE
(1)
CERVIX
(3)
FIBROBLAST
(3)
HEART
(3)
HELA
(1)
KIDNEY
(6)
LIVER
(3)
OTHER
(1)
RRP40.ip
(40)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
GGCCGCCTTTACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTAAGTATGCCCCAGCCTGTGGTTTTGCCCAGTTGTATTTCCTTGTCTGTACTATTTCCTGGTTGATGTACCTTTTCAGCCAGCGACTATCTGTCTCCAAGTTCCTTTCTAATTTTACTAATTCTGTTTTTGAAGGTTTCAATGAGAGTGGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCT
..................................................(((((.......(((.(((.((.....))))))))......((((.............((((((((.........)))))))).(((.....)))..))))............)))))...(((.......)))...................................................
..................................................51....................................................................................................................................185................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR040028(GSM532913)
G026N. (cervix)
SRR029128(GSM416757)
H520. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR189782TAX577739(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR037943(GSM510481)
293DcrTN. (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR191477(GSM715587)
2genomic small RNA (size selected RNA from to. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR029129(GSM416758)
SW480. (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSE20417(GSM514985)
Colon and lung cancer pool.
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR191546(GSM715656)
152genomic small RNA (size selected RNA from . (breast)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR038861(GSM458544)
MM466. (cell line)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
SRR029126(GSM416755)
143B. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)
SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)
SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR029131(GSM416760)
MCF7. (cell line)
TAX577453(Rovira)
total RNA. (breast)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
GSM359177(GSM359177)
hela_nucl_a. (hela)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................................................................................................................................TTTACTAATTCTGTTTTTGAAGA.................................................231110.0062.004.0010.008.002.008.003.001.00-3.002.001.00-2.001.002.001.00-----1.002.001.002.002.001.001.003.002.003.001.002.002.00----2.002.00-1.00-1.00--2.00--1.00-1.00-1.00---2.00-2.001.00---1.001.00--2.00--1.00-1.00---1.00---1.00---1.00---1.00--1.00-----1.00--1.00-----1.001.00-1.00-----1.001.00----------1.001.00---1.00-1.00----1.00----------
...................................................................................................................................................................TTTACTAATTCTGTTTTTGAAG..................................................22162.0062.001.005.00-1.00-4.001.00-2.003.002.005.00------1.002.00-1.001.002.002.002.002.002.00--------1.00--1.00---1.001.002.00---------1.00-----2.00----2.00-----1.00---1.00---1.00-1.001.00---------------1.00---1.00-1.00-----1.00------------------------1.00--1.00---1.00-------
..................................................................................................................................................................TTTTACTAATTCTGTTTTTGAAGA.................................................24143.0024.006.003.00-3.00-2.001.00---1.001.00--1.002.00-1.00-1.00------1.00--1.00------1.00-1.00---1.00-------1.001.00-1.00----1.00---1.001.00-------1.00--1.00-------------1.00--1.00-1.001.00------------------------------1.00-----------1.00----1.00---1.00----
...................................................................................................................................................................TTTACTAATTCTGTTTTTGAAGT.................................................23125.0062.0014.003.00----3.00-1.00--------1.00------------------------1.00-------------------1.00----------------------------------------------------------1.00-----------------------------
..................................................................................................................................................................TTTTACTAATTCTGTTTTTGAAG..................................................23124.0024.00-1.00-3.00----1.001.001.00-3.001.00----2.00-------------1.00---1.00---------------2.00--1.00--1.00------1.00----2.00----------------1.00-------------------------------1.00-------------------------------
..................................................................................................................................................................TTTTACTAATTCTGTTTTTGAAGT.................................................24112.0024.005.00-1.00-2.00-1.00--------1.00-1.00--------------------------1.00----------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTTACTAATTCTGTTTTTGAAGAA................................................2417.0062.00---------------------------------1.00---------------------------------------1.00--------------------------1.00-----1.00--1.00----------------1.001.00-----------------------
...................................AGGAGGTGGAAGAGCGTTT.....................................................................................................................................................................................196.000.00----------------2.00---------------------------------------1.00----------2.00----------------------------1.00------------------------------------------------------
...................................................................................................................................................................TTTACTAATTCTGTTTTTGA....................................................2015.005.00--1.00---1.003.00-----------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................TTCTAATTTTACTAATTCTGTTTTTGAAG..................................................2914.004.00---------------------------------------------------------------------2.00--------------------1.00-----------------------------1.00------------------------------
.................................................................................................................................................................ATTTTACTAATTCTGTTTTTGAAGA.................................................2513.001.001.00------------2.00-----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTTACTAATTCTGTTTTTGAAGTA................................................2413.0062.003.00------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................TTTTACTAATTCTGTTTTTGAAGG.................................................2412.002.001.00----------------------------------------------------------------------------------------------------------------1.00-------------------------------------
..................................................................................................................................................................TTTTACTAATTCTGTTTTTGAAGAA................................................2512.0024.00--1.00--------------------------------------1.00-------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TGATTATGCAGAACTGGG..1812.002.00----------1.00----------------------------------------------------1.00---------------------------------------------------------------------------------------
...............................AAGCAGGAGGTGGAAGAGCTC.......................................................................................................................................................................................212.000.00-----------------------------------2.00-------------------------------------------------------------------------------------------------------------------
..............GTGCCTTGGAGTATCTGAAGCAGGA....................................................................................................................................................................................................2512.002.00----------------------------------2.00--------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................TTTTACTAATTCTGTTTTTGA....................................................2112.002.00-------2.00-----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTTACTAATTCTGTTTTTGAAT..................................................222.000.00--------------1.00------1.00---------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTTACTAATTCTGTTTTTTA....................................................202.000.00-------2.00-----------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................TGGTGATCCAAGCTGCGTGA.................2012.002.00----------------2.00--------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TTACTAATTCTGTTTTTGAAGA.................................................222.000.00-------------------------------1.00----------------------------------------------------------------------1.00------------------------------------------------
............................CTGAAGCAGGAGGTGGAAGAGC.........................................................................................................................................................................................2212.002.00-------------------------------------------------------------------------------1.00-----------------1.00-----------------------------------------------------
.............................TGAAGCAGGAGGTGGAAGAG..........................................................................................................................................................................................2011.001.00--------------------1.00----------------------------------------------------------------------------------------------------------------------------------
............................CTGAAGCAGGAGGTGGAAGAG..........................................................................................................................................................................................2111.001.00-------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
......................GAGTATCTGAAGCAGGAGGTG................................................................................................................................................................................................2111.001.00------------------------------------------------------1.00------------------------------------------------------------------------------------------------
................GCCTTGGAGTATCTGAAGCAGGAA...................................................................................................................................................................................................241.000.00------------------------------------------------------1.00------------------------------------------------------------------------------------------------
......................GAGTATCTGAAGCAGGAGG..................................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------------------------------------------------------------------------------1.00-----
................................................................................................................................................................................................TGAGAGTGGTGATCCAAG.........................1811.001.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................CCTTTCTAATTTTACTCACT..............................................................201.000.00--------------------1.00----------------------------------------------------------------------------------------------------------------------------------
..................................CAGGAGGTGGAAGAGCGTT......................................................................................................................................................................................191.000.00-------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
..............................GAAGCAGGAGGTGGAAGAGCGTT......................................................................................................................................................................................231.000.00------------------------------------------------------------------------------------1.00------------------------------------------------------------------
...................TTGGAGTATCTGAAGCAGGAGGTGGA..............................................................................................................................................................................................2611.001.00----------------------------------------------------------------------------------------------------------------------------------1.00--------------------
...................................................................................................................................................................TTTACTAATTCTGTTTTTG.....................................................1911.001.00-------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................CTTTCTAATTTTACTAATTCTGTTTTTGAAGA.................................................3211.001.00------------------------------------------------------------------------------------------------------------------------------------1.00------------------
...................................................................................................................................................................TTTACTAATTCTGTTTTTGAATA.................................................231.000.00----------------------------------------------------------------1.00--------------------------------------------------------------------------------------
...................................................................................................................................................................TTTACTAATTCTGTTTTTGAAGAT................................................2411.0062.00------------1.00------------------------------------------------------------------------------------------------------------------------------------------
.................................GCAGGAGGTGGAAGAGCGTT......................................................................................................................................................................................201.000.00---------------------------------------------------------------------------------------------------------------------------------------------1.00---------
..................................................GTAAGTATGCCCCAGCCTGTGGTA.................................................................................................................................................................241.000.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------------
....................TGGAGTATCTGAAGCAGGAGG..................................................................................................................................................................................................2111.001.00------------------------------------------------------------------------------------------------------------------------------------------1.00------------
..................................................................................................................................................................TTTTACTAATTCTGTTTTGAAG...................................................221.000.00-------------------------------------------------------------------------------------------------------------------1.00-----------------------------------
...................................................................................................................................................................TTTACTAATTCTGTTTTTGACG..................................................2211.005.00---------1.00---------------------------------------------------------------------------------------------------------------------------------------------
...................TTGGAGTATCTGAAGCAGGAGGTG................................................................................................................................................................................................2411.001.00----------------------------------------1.00--------------------------------------------------------------------------------------------------------------
..................................CAGGAGGTGGAAGAGCGTTT.....................................................................................................................................................................................201.000.00--------------------------------------------------------1.00----------------------------------------------------------------------------------------------
..........................................................................................................................................................CTTTCTAATTTTACTAATTCTGTTTTTGAAG..................................................3111.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GGTGATCCAAGCTGCGTGA.................1911.001.00--------------------------------------------------------------------------------------1.00----------------------------------------------------------------
...............................AAGCAGGAGGTGGAAATTG.........................................................................................................................................................................................191.000.00--------------------1.00----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................TTTTACTAATTCTGTTTTTTAAG..................................................231.000.00-----------------------------------------------------------------------------------------------1.00-------------------------------------------------------
..................................................................................................................GATGTACCTTTTCAGCCAG......................................................................................................1911.001.00--------------------------------------------------1.00----------------------------------------------------------------------------------------------------
................................AGCAGGAGGTGGAAGAGCGCCTC....................................................................................................................................................................................231.000.00-----------------------------------1.00-------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................AATTTTACTAATTCTGTTTTTGAATA.................................................261.000.00-----------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.................................GCAGGAGGTGGAAGAGCGTTT.....................................................................................................................................................................................211.000.00----------------------------------1.00--------------------------------------------------------------------------------------------------------------------
..CCGCCTTTACTCGTGCCTTG.....................................................................................................................................................................................................................2011.001.00--------------------------------------------------------------------------------------------------------------------------1.00----------------------------
..................CTTGGAGTATCTGAAGCAGGA....................................................................................................................................................................................................2111.001.00----------------------------------------1.00--------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................TTTCAATGAGAGTGGTGACCCA...........................221.000.00------------------------------------------------------------------------------------------------------------------------------------------------1.00------
..................................................GTAAGTATGCCCCAGCCTGTGG...................................................................................................................................................................2211.001.00------------------------------------------------------------------------1.00------------------------------------------------------------------------------
......................................................................................................................................................................ACTAATTCTGTTTTTGAAG..................................................1911.001.00-------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
....................TGGAGTATCTGAAGCAGGAGGTGGAAGA...........................................................................................................................................................................................2811.001.00-------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................TTTTACTAATTCTGTTTTTGAAGAAA...............................................2611.0024.00-------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................TTTTACTAATTCTGTTTTTGAA...................................................2211.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.............................TGAAGCAGGAGGTGGAGGAG..........................................................................................................................................................................................201.000.00---------------------1.00---------------------------------------------------------------------------------------------------------------------------------
...........................TCTGAAGCAGGAGGTGGAAGAGCGT.......................................................................................................................................................................................2511.001.00------------------1.00------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTTACTAATTCTGTTTTTGAAGC.................................................2311.0062.00-----------------------------------------------------------------------------------------------------------------------------------1.00-------------------
...................TTGGAGTATCTGAAGCAGGAGGTGGAA.............................................................................................................................................................................................2711.001.00-------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
.........................TATCTGAAGCAGGAGGTGGAAGAGC.........................................................................................................................................................................................2511.001.00-------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................CTAATTCTGTTTTTGAAGAA................................................201.000.00----------------------------------------------------------------------------------------------------------------1.00--------------------------------------
...................TTGGAGTATCTGAAGCAGGAG...................................................................................................................................................................................................2111.001.00-----------------------------------------------1.00-------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCCTTTCTAATTTTACTAATTCTGTT.........................................................2611.001.00---------------------------------------------------------------------------------------------------------------------------------------------------1.00---
...................................AGGAGGTGGAAGAGCGGAAC....................................................................................................................................................................................201.000.00------------------------------------------------1.00------------------------------------------------------------------------------------------------------
...........................TCTGAAGCAGGAGGTGTCA.............................................................................................................................................................................................191.000.00------------------------------------------------------------------------------------------------------------------1.00------------------------------------
..................................................................................................................................................................TTTTACTAATTCTGTTTTTTAAT..................................................231.000.00---------------------------------------------------------------------------------------------------------------------------1.00---------------------------
..................................................................................................................................................................TTTTACTAATTCTGTTTTTAAAG..................................................231.000.00--------------------------------------------------------------------------------------------------------------------------------------1.00----------------
..............GTGCCTTGGAGTATCATTG..........................................................................................................................................................................................................191.000.00--------------------1.00----------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TGAGAGTGGTGATCCAAGCTGC.....................2211.001.00----------------------1.00--------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TGATTATGCAGAACTGGGTT2011.002.00--------------------------------------------------------------------------------------------------------1.00----------------------------------------------
...................TTGGAGTATCTGAAGCAGGAGGT.................................................................................................................................................................................................2311.001.00---------------------------------------------------------------------------1.00---------------------------------------------------------------------------
.................................................................................................................................................................ATTTTACTAATTCTGTTTTTGAAG..................................................2411.001.00-----------------------1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTTACTAATTCTGTTTTTGAATAA................................................241.000.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------------
.................CCTTGGAGTATCTGAAGCAGGAGG..................................................................................................................................................................................................2411.001.00-----------------------------------------------1.00-------------------------------------------------------------------------------------------------------
................................AGCAGGAGGTGGAAGAGC.........................................................................................................................................................................................1830.670.67-----------------------------------------------------------------------------------------------------------------------------------------------------0.330.33
...................TTGGAGTATCTGAAGC........................................................................................................................................................................................................1620.500.50--------------------------------------------------------------------------0.50----------------------------------------------------------------------------
.................................GCAGGAGGTGGAAGAGCG........................................................................................................................................................................................1820.500.50-------------0.50-----------------------------------------------------------------------------------------------------------------------------------------
.............................TGAAGCAGGAGGTGGAA.............................................................................................................................................................................................1720.500.50----------------------------------------------------------------------------------------------------------------------------------------------------0.50--

Antisense strand
GGCCGCCTTTACTCGTGCCTTGGAGTATCTGAAGCAGGAGGTGGAAGAGCGTAAGTATGCCCCAGCCTGTGGTTTTGCCCAGTTGTATTTCCTTGTCTGTACTATTTCCTGGTTGATGTACCTTTTCAGCCAGCGACTATCTGTCTCCAAGTTCCTTTCTAATTTTACTAATTCTGTTTTTGAAGGTTTCAATGAGAGTGGTGATCCAAGCTGCGTGATTATGCAGAACTGGGCT
..................................................(((((.......(((.(((.((.....))))))))......((((.............((((((((.........)))))))).(((.....)))..))))............)))))...(((.......)))...................................................
..................................................51....................................................................................................................................185................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR040028(GSM532913)
G026N. (cervix)
SRR029128(GSM416757)
H520. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR189782TAX577739(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR037943(GSM510481)
293DcrTN. (cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR191477(GSM715587)
2genomic small RNA (size selected RNA from to. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR029129(GSM416758)
SW480. (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSE20417(GSM514985)
Colon and lung cancer pool.
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR191546(GSM715656)
152genomic small RNA (size selected RNA from . (breast)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR038861(GSM458544)
MM466. (cell line)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
SRR029126(GSM416755)
143B. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)
SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)
SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR029131(GSM416760)
MCF7. (cell line)
TAX577453(Rovira)
total RNA. (breast)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
GSM359177(GSM359177)
hela_nucl_a. (hela)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..........................................................................................................................................ATCTGTCTCCAAGTTCCTTGGA........................................................................... 221.000.00----------------------------------------------------------------------------------------------------------------------------1.00--------------------------
....................................................................GTGGTTTTGCCCAGTTGTGGTA................................................................................................................................................. 221.000.00------------------------------------------------------------------------------1.00------------------------------------------------------------------------
.......................................................TATGCCCCAGCCTGTGGAA................................................................................................................................................................. 191.000.00------------------------------------------------1.00------------------------------------------------------------------------------------------------------
..............................................................................................................................................GTCTCCAAGTTCCTTGAC........................................................................... 181.000.00------------------------------------------------------------1.00------------------------------------------------------------------------------------------
...........................................................................................................................................TCTGTCTCCAAGTTCCTTAGGC.......................................................................... 221.000.00----------------------------------------------------------------------------------------------------------------------1.00--------------------------------