ID: uc001tgt.2_intron_3_0_chr12_100551856_r.5p
GENE: (3)
chr12:100552376-100552625-


(2)
AGO2.ip 		(2)
BREAST 		(5)
CELL-LINE 		(2)
CERVIX 		(1)
OTHER 		(2)
SKIN 		(1)
TESTES

Sense strand
GAACCAGCAGCCTCAGGCCCAGTTGAGCCTCATGGCTCTCCCTGGGGAAGGTACCGGAGACTGCTCACAGGAAGAGGAGAGAGCCCCAGGAGGAAACGGGAACTGTTAGCAGCATAGGATTGAGGAGCTGAAACAGACTTTTAGAACAGCTGGTCATTATGCCAACCAGGTGTCCACACTAAGTTTGGCACCAATATGGTGACCTTCTGGGAGCAGGGGACCACCAGGTTAGGTTGCCTAAGGGTGGGTG
..............................................................................................(((((...)))))..((((.........((((((((...))).)))))......))))..................................................................................................
.........................................................................................90.............................................................153...............................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)		SRR189784SRR189782SRR189785RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM532874(GSM532874)
G699T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)
..............................................................................................AACGGGAACTGTTAGCAGC.........................................................................................................................................19171.0071.0071.00----------------
.................................................................................................GGGAACTGTTAGCAGCATA......................................................................................................................................19143.0043.0043.00----------------
.................................................................................................................ATAGGATTGAGGAGCTGAAACAGACT...............................................................................................................26134.0034.0034.00----------------
.....................................................................................................................................CAGACTTTTAGAACAG.....................................................................................................16317.3317.3317.33----------------
...................................................................................................................AGGATTGAGGAGCTGAAACAGACTTT.............................................................................................................26117.0017.0017.00----------------
....................................................................................................................GGATTGAGGAGCTGAAACAGACTTT.............................................................................................................25116.0016.0015.00-------1.00--------
............................................................................................................................................................................................CACCAATATGGTGACCTCCCG.........................................2115.000.00-13.00-2.00-------------
..................................................................................................................................AAACAGACTTTTAGAACAG.....................................................................................................19111.0011.0011.00----------------
.................................................................................................................ATAGGATTGAGGAGCTGAAACAGACTTT.............................................................................................................28111.0011.0011.00----------------
.................................................................................................................ATAGGATTGAGGAGCTGAAACAGAC................................................................................................................25110.0010.0010.00----------------
....................................................................................................................................ACAGACTTTTAGAACAG.....................................................................................................1726.506.506.50----------------
....................................................................................................................GGATTGAGGAGCTGAAACAGACTTTT............................................................................................................2616.006.006.00----------------
....................................................................................CCCAGGAGGAAACGGGAACTGTTAGC............................................................................................................................................2615.005.005.00----------------
.................................................................................................................ATAGGATTGAGGAGCTGAAACAGACTTTT............................................................................................................2915.005.005.00----------------
....................................................................................................................GGATTGAGGAGCTGAAACAGACTTTTAGAACAG.....................................................................................................3315.005.005.00----------------
.................................................................................................................ATAGGATTGAGGAGCTGAAACAGACTTTTA...........................................................................................................3014.004.004.00----------------
...................................................................................................................................AACAGACTTTTAGAACAG.....................................................................................................1814.004.004.00----------------
..........................................................................................................................AGGAGCTGAAACAGACTTTTAGAACAGC....................................................................................................2814.004.004.00----------------
...................................................TACCGGAGACTGCTCACAGGAAGAGG.............................................................................................................................................................................2613.003.003.00----------------
..................................................................................................................TAGGATTGAGGAGCTGAAACAGACTTTTA...........................................................................................................2913.003.003.00----------------
.............................................................................................AAACGGGAACTGTTAG.............................................................................................................................................1613.003.003.00----------------
.................................................................CACAGGAAGAGGAGAGAGCCCCAGGA...............................................................................................................................................................2623.003.003.00----------------
..............................................................................................................AGCATAGGATTGAGGAGCTGAAACAG..................................................................................................................2613.003.003.00----------------
................................................................................................CGGGAACTGTTAGCAGCAT.......................................................................................................................................1913.003.003.00----------------
..............................................................................................................................................................................................CCAATATGGTGACCTCCCG.........................................193.000.00--3.00--------------
....................................................................................................................GGATTGAGGAGCTGAAACAGACTTTTAGAAC.......................................................................................................3113.003.003.00----------------
...............................................................................................ACGGGAACTGTTAGCAGCATA......................................................................................................................................2113.003.003.00----------------
.................................................................................................................ATAGGATTGAGGAGCTGAAACAGACTT..............................................................................................................2713.003.003.00----------------
.............................................................................................................................................TAGAACAGCTGGTCATTATGCCAACCAGGA...............................................................................302.000.002.00----------------
...................................................................................................................AGGATTGAGGAGCTGAAACAGACTTTTAGAACAG.....................................................................................................3412.002.002.00----------------
.................................................................CACAGGAAGAGGAGAGAGCCCCAGG................................................................................................................................................................2522.002.002.00----------------
.....................................................................................CCAGGAGGAAACGGGAACTGTTAGCAGCATA......................................................................................................................................3112.002.002.00----------------
....................................................................................................................GGATTGAGGAGCTGAAACAGACTTTTAGA.........................................................................................................2912.002.002.00----------------
.......................................................................................................................TTGAGGAGCTGAAACAGACTTTTAGAACAGC....................................................................................................3112.002.002.00----------------
.................................................................................................................ATAGGATTGAGGAGCTGAAACAGACTTTTT...........................................................................................................3012.005.002.00----------------
..............................................................................................AACGGGAACTGTTAGCAGCATAGGATT.................................................................................................................................2712.002.002.00----------------
.................................................................................................GGGAACTGTTAGCAGCATAGGATTGAGGAGC..........................................................................................................................3112.002.002.00----------------
................................................................................................................................TGAAACAGACTTTTAGAACAG.....................................................................................................2112.002.002.00----------------
........................................................................AGAGGAGAGAGCCCCAGGAGGAAACGGG......................................................................................................................................................2812.002.002.00----------------
.............................................................................................................CAGCATAGGATTGAGGAGCTGAAACA...................................................................................................................2612.002.002.00----------------
...................................................................................................................AGGATTGAGGAGCTGAAACAGACTTTTAGT.........................................................................................................302.000.002.00----------------
................................................................................................CGGGAACTGTTAGCAGCATA......................................................................................................................................2012.002.002.00----------------
..........................................................................................................................AGGAGCTGAAACAGACTTTTAGAACAG.....................................................................................................2712.002.002.00----------------
...................................................................................................................AGGATTGAGGAGCTGAAACAGACTTTTAGA.........................................................................................................3012.002.002.00----------------
.................................................................................................................ATAGGATTGAGGAGCTGAAACAGACTTTTAGA.........................................................................................................3212.002.002.00----------------
................................................................................................................CATAGGATTGAGGAGCTGAAACAGAC................................................................................................................2612.002.002.00----------------
...................................................................................................................AGGATTGAGGAGCTGAAACAGACTT..............................................................................................................2512.002.002.00----------------
........................................................................AGAGGAGAGAGCCCCAGGAGGAAACGG.......................................................................................................................................................2712.002.002.00----------------
....................................................................................................................................ACAGACTTTTAGAACAGCT...................................................................................................1912.002.002.00----------------
...................................................................................CCCCAGGAGGAAACGGGAACTGTTAGC............................................................................................................................................2712.002.002.00----------------
................................................................................................................CATAGGATTGAGGAGCTGAAACAGACT...............................................................................................................2712.002.002.00----------------
................................................................................................................CATAGGATTGAGGAGCTGAAACAGACTTT.............................................................................................................2912.002.002.00----------------
.................................................................................................................ATAGGATTGAGGAGCTGAAACATAC................................................................................................................251.000.001.00----------------
....................................................................AGGAAGAGGAGAGAGCCCCAGGAGGAAT..........................................................................................................................................................281.000.001.00----------------
................................................................................................................................................................................................................GGGAGCAGGGGACCA...........................1501.001.00--------------1.00--
.................................................................................................................ATAGGATTGAGGAGCTGAAACAGACTTA.............................................................................................................2811.003.001.00----------------
................GCCCAGTTGAGCCTCATGGCTT....................................................................................................................................................................................................................221.000.001.00----------------
..............................................................................................AACGGGAACTGTTAGCAGCATAGGATTGAGT.............................................................................................................................311.000.001.00----------------
.................................................................................................................ATAGGATTGAGGAGCTGAAACAGACTTTTAGAAC.......................................................................................................3411.001.001.00----------------
........................................................................................................................................ACTTTTAGAACAGCTGGTCATTATGCCAAC....................................................................................3011.001.001.00----------------
.....................................................CCGGAGACTGCTCACAGGAAGAGGAG...........................................................................................................................................................................2611.001.001.00----------------
....................................................................................................................GGATTGAGGAGCTGAAACAG..................................................................................................................2011.001.001.00----------------
...............GGCCCAGTTGAGCCTGGC.........................................................................................................................................................................................................................181.000.00----------1.00------
..............................................................................................................AGCATAGGATTGAGGAGCTGAAACAGA.................................................................................................................2711.001.001.00----------------
.....AGCAGCCTCAGGCCCCCA...................................................................................................................................................................................................................................181.000.00----------------1.00
..................................................................................................................TAGGATTGAGGAGCTGAAACAGAC................................................................................................................2411.001.001.00----------------
.....................................................................................................................GATTGAGGAGCTGAAACAGACTT..............................................................................................................2311.001.001.00----------------
...................................................................................................................AGGATTGAGGAGCTGAAACAGACT...............................................................................................................2411.001.001.00----------------
....................................................................................................................GGATTGAGGAGCTGAAGCAG..................................................................................................................201.000.00----1.00------------
................................................................................................................................TGAAACAGACTTTTAGAACA......................................................................................................2011.001.001.00----------------
...................................................................................................................AGGATTGAGGAGCTGAAACAGACTTA.............................................................................................................2611.002.001.00----------------
................................................................................................CGGGAACTGTTAGCAGC.........................................................................................................................................1711.001.001.00----------------
..............................................................................................................................GCTGAAACAGACTTTTAGAACAGCTGGT................................................................................................2811.001.001.00----------------
..............................................................................................AACGGGAACTGTTAGCAGCATA......................................................................................................................................2211.001.001.00----------------
..................................................................................................................TAGGATTGAGGAGCTGAAACAGACTTTTAGA.........................................................................................................3111.001.001.00----------------
...............................................................................................ACGGGAACTGTTAGCAGC.........................................................................................................................................1811.001.001.00----------------
.................................................................CACAGGAAGAGGAGAGAGCCCCAGT................................................................................................................................................................251.000.001.00----------------
..........................................................................................AGGAAACGGGAACTGTTAGCAGCATA......................................................................................................................................2611.001.001.00----------------
.............................................................................................................CAGCATAGGATTGAGGAGCTGAAACAGA.................................................................................................................2811.001.001.00----------------
........................................................................................................................................................................................TTGGCACCAATATGGTGACCTTCTGGGAGC....................................3011.001.001.00----------------
......................................................................................................................ATTGAGGAGCTGAAACAGACTTTTAGAACAGC....................................................................................................3211.001.001.00----------------
.....................................................................................................................................................................................................GGTGACCTTCTGGGAGCAGGGGCGT............................251.000.00---------1.00-------
.................................................................................................................................GAAACAGACTTTTAGAACAG.....................................................................................................2011.001.001.00----------------
.............................................................................................................CAGCATAGGATTGAGGAGCTGAAAC....................................................................................................................2511.001.001.00----------------
...........................................GGGGAAGGTACCGGAGACTG...........................................................................................................................................................................................2011.001.001.00----------------
......................................................................................................................................AGACTTTTAGAACAGATTC.................................................................................................191.000.00---------------1.00-
....................................................................................CCCAGGAGGAAACGGGAACTGTTAGCAGCATA......................................................................................................................................3211.001.001.00----------------
.......................................................................................................................TTGAGGAGCTGAAACAGACTTTTAGAACAG.....................................................................................................3011.001.001.00----------------
...................................................................................................................AGGATTGAGGAGCTGAAACAGACTTTTAGAA........................................................................................................3111.001.001.00----------------
................................................................................................CGGGAACTGTTAGCAG..........................................................................................................................................1611.001.001.00----------------
.................................................................................................GGGAACTGTTAGCAGCAT.......................................................................................................................................1811.001.001.00----------------
....................................................................................................................GGATTGAGGAGCTGAAACAGACTTTTAGAA........................................................................................................3011.001.001.00----------------
..............................................................................................AACGGGAACTGTTAGCGGC.........................................................................................................................................191.000.001.00----------------
...............................................................................................................GCATAGGATTGAGGAGCTGAAACAGA.................................................................................................................2611.001.001.00----------------
..........................................................................................................TAGCAGCATAGGATTGAGGAGCTCA.......................................................................................................................251.000.001.00----------------
........................................CCTGGGGAAGGTACCGGAGACTGCTC........................................................................................................................................................................................2611.001.001.00----------------
...................................................................................................................AGGATTGAGGAGCTGAAACAGACTTTTAGAACT......................................................................................................331.000.001.00----------------
..............................................................................GAGAGCCCCAGGAGGAAACGGAACT...................................................................................................................................................251.000.001.00----------------
................................................................................................................CATAGGATTGAGGAGCTGAAACAGACTTTTA...........................................................................................................3111.001.001.00----------------
.................................................................................................GGGAACTGTTAGCAGCATATT....................................................................................................................................2111.0043.001.00----------------
.......................................................................................................................TTGAGGAGCTGAAACAGAC................................................................................................................1911.001.001.00----------------
..............................................................................................................AGCATAGGATTGAGGAGCTGAAACAGACTTT.............................................................................................................3111.001.001.00----------------
..........................................................................................................TAGCAGCATAGGATTGAGGAGCTGAAAC....................................................................................................................2811.001.001.00----------------
...................................................................................................................AGGATTGAGGAGCTGAAACAGACTTTAGAA.........................................................................................................3011.0017.001.00----------------
...........................................................................................................................................................ATTATGCCAACCAGGTGTCCACACTAA....................................................................2711.001.001.00----------------
........................................................................AGAGGAGAGAGCCCCAGGAGGAAACGGT......................................................................................................................................................2811.002.001.00----------------
................................................................................................................CATAGGATTGAGGAGCTGAAACA...................................................................................................................2311.001.001.00----------------
....................................................................................................................GGATTGAGGAGCTGAAACAGACTTTTAG..........................................................................................................2811.001.001.00----------------
....................................................................................................................................................................................................................GCAGGGGACCACCAGGTTGC..................201.000.00-------------1.00---
..........................................................................................AGGAAACGGGAACTGTTAG.............................................................................................................................................1911.001.001.00----------------
...............................................................................................ACGGGAACTGTTAGCAGCAT.......................................................................................................................................2011.001.001.00----------------
.............................................................................................................CAGCATAGGATTGAGGAGCTGAAA.....................................................................................................................2411.001.001.00----------------
..........................................................................................................................................TTTTAGAACAGCTGGTCATTATGCCGACC...................................................................................291.000.001.00----------------
.................................................................................................................ATAGGATTGAGGAGCTGAAAC....................................................................................................................2111.001.001.00----------------
.................................................................................................GGGAACTGTTAGCAGC.........................................................................................................................................1611.001.001.00----------------
..............................................................................................................AGCATAGGATTGAGGAGCTGAAAC....................................................................................................................2411.001.001.00----------------
...................................................................CAGGAAGAGGAGAGAGCCCCAGGAG..............................................................................................................................................................2511.001.001.00----------------
..............................................................................................................................................................................................CCAATATGGTGACCTCGCG.........................................191.000.00--1.00--------------
.................................................................................................................ATAGGATTGAGGAGCTGAAACAGACTTTTAA..........................................................................................................3111.004.001.00----------------
...................................................................................................................AGGATTGAGGAGCTGAAACAGACTTTT............................................................................................................2711.001.001.00----------------
..................................................................................................................TAGGATTGAGGAGCTGAAACAGACA...............................................................................................................2511.001.001.00----------------
.......................................................................................................................TTGAGGAGCTGAAACAGACTTTTAGAAC.......................................................................................................2811.001.001.00----------------
......................................................................................................................ATTGAGGAGCTGAAACAGACTTTTAGAACAG.....................................................................................................3111.001.001.00----------------
.............................................................................................................CAGCATAGGATTGAGGAGCTGAAACAG..................................................................................................................2711.001.001.00----------------
.....................................................................................................ACTGTTAGCAGCATAGGATTGAGGAGC..........................................................................................................................2711.001.001.00----------------
...................................................................................................................................................................................................................AGCAGGGGACCACCAGGTTG...................201.000.00-----------1.00-----
.................................................................................................................ATAGGATTGAGGAGCTGAAACAGACTTTA............................................................................................................2911.0011.001.00----------------
.................................................................CACAGGAAGAGGAGAGAGC......................................................................................................................................................................1920.500.500.50----------------
....................................................................................................AACTGTTAGCAGCATA......................................................................................................................................1630.330.330.33----------------
..........................................................................................................................................TTTTAGAACAGCTGGT................................................................................................1640.250.250.25----------------
.................................................................................................GGGAACTGTTAGCAG..........................................................................................................................................1560.170.170.17----------------
........................................................GAGACTGCTCACAGG...................................................................................................................................................................................1580.120.120.12----------------

Antisense strand
GAACCAGCAGCCTCAGGCCCAGTTGAGCCTCATGGCTCTCCCTGGGGAAGGTACCGGAGACTGCTCACAGGAAGAGGAGAGAGCCCCAGGAGGAAACGGGAACTGTTAGCAGCATAGGATTGAGGAGCTGAAACAGACTTTTAGAACAGCTGGTCATTATGCCAACCAGGTGTCCACACTAAGTTTGGCACCAATATGGTGACCTTCTGGGAGCAGGGGACCACCAGGTTAGGTTGCCTAAGGGTGGGTG
..............................................................................................(((((...)))))..((((.........((((((((...))).)))))......))))..................................................................................................
.........................................................................................90.............................................................153...............................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)		SRR189784SRR189782SRR189785RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM532874(GSM532874)
G699T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)
............................................................................................................GCAGCATAGGATTGAATG............................................................................................................................ 181.000.00---1.00-------------
....CAGCAGCCTCAGGCCCAGTAG................................................................................................................................................................................................................................. 211.000.00------------1.00----
......................................................................................................................ATTGAGGAGCTGAAATTTG................................................................................................................. 191.000.00-1.00---------------
............................................................................................................GCAGCATAGGATTGACTAT........................................................................................................................... 191.000.00-----1.00-----------
.................................................................................AGCCCCAGGAGGAAACACGC..................................................................................................................................................... 201.000.00------1.00----------
......................................................................................................CTGTTAGCAGCATAGGATTGAGGG............................................................................................................................ 241.000.00-------1.00---------
........................................................................................................TCCTCAATCCTATGCTGCTAAC............................................................................................................................ 2230.330.330.33----------------
.....................................................................................................TCCTCAATCCTATGCTGCTAACAGT............................................................................................................................ 2530.330.330.33----------------
......................................................................................................TCAATCCTATGCTGCTAACAG............................................................................................................................... 2190.110.110.11----------------