ID: uc001tat.2_intron_9_0_chr12_88508960_r
GENE: (10)
chr12:88508910-88509304-


(2)
BRAIN 		(5)
BREAST 		(8)
CELL-LINE 		(1)
CERVIX 		(6)
HEART 		(1)
LIVER 		(1)
OTHER 		(8)
SKIN 		(1)
TESTES

Sense strand
GTAGAAATGCAGATATAGAGCTTGAACATCACAGAAGCCAGGCAGAACAGGTAGTGTAAAGGCAGAACATTAAAAGAGATGATTGTGGTACTAAAGACAAAAACCGTTATATCTTTTTGCCTCTTACCATGGATGTTGGGAGAGGGAGAAAGTGGGATTAAGATCACCATCTGCTTTACTGTTTAGATTTTAGTTTATTTTTATGATTGCTGCTATGTCTTCATAGCTCGTTTTTTTTGTTTTGTTTTGTTATACTTAATTGATCAAACTTTTCTTAACTTGAAAATTATAGACTTGTGATATTTTGTTGAAAAAAATCAATTTTATTCTCTCTGCTTTTTTCAGAATGAATTTCTTTCAAGAGAACTAATTGAAAAAGAAAGAGATTTAGAAAG
....................................................((((((...((((((((.((((((((((((..(((((..((((((...............((((((.((((((.(((.......))))))))).))))))..(((((((((((.......((......))...))))))))))).))))))..))))).((((((....))))))))))))))))))...))))))))))))))...........................................................................................................................................
..................................................51...........................................................................................................................................................................................................256.........................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577738(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR040035(GSM532920)
G001T. (cervix)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
...................................................................................................................................................................................................................................TCGTTTTTTTTGTTTTGTTTTGGTT...............................................................................................................................................2539.000.0026.0013.00--------------------------------
......................................................................................................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTGCTG............................................................................................................................................2524.000.007.0016.001.00-------------------------------
...................................................................................................................................................................................................................................TCGTTTTTTTTGTTTTGTTTTGG.................................................................................................................................................2321.000.007.0014.00--------------------------------
.....................................................................................................................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTGCTG............................................................................................................................................2621.000.0015.005.001.00-------------------------------
.....................................................................................................................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTGTCG............................................................................................................................................2610.000.007.003.00--------------------------------
......................................................................................................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTGTCG............................................................................................................................................2510.000.006.004.00--------------------------------
.......................................................................................................................................................................................................................................TTTTTTTGTTTTGTTTTGTTGCTG............................................................................................................................................248.000.003.005.00--------------------------------
....................................................AGTGTAAAGGCAGAAGAGA....................................................................................................................................................................................................................................................................................................................................197.000.00-----2.002.00--1.00---------------1.00-1.00------
......................................................................................................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTGTC.............................................................................................................................................246.000.004.002.00--------------------------------
.....................................................................................................................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTGCT.............................................................................................................................................255.000.003.002.00--------------------------------
.......................................................................................................................................................................................................................................TTTTTTTGTTTTGTTTTGTTGTCG............................................................................................................................................245.000.003.002.00--------------------------------
.....................................................................................................................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTGTC.............................................................................................................................................254.000.003.001.00--------------------------------
...................................................................................................................................................................................................................................TCGTTTTTTTTGTTTTGTTTTGGTTT..............................................................................................................................................264.000.004.00---------------------------------
....................................................................................................................................................................................................................................CGTTTTTTTTGTTTTGTTTTGG.................................................................................................................................................223.000.001.002.00--------------------------------
....................................................................................................................................................................................................................................CGTTTTTTTTGTTTTGTTTTGGT................................................................................................................................................232.000.001.001.00--------------------------------
..................................................................................................................................................................................................................................CTCGTTTTTTTTGTTTTGTTTTGG.................................................................................................................................................242.000.002.00---------------------------------
.......................................................................................................................................................................................................................................TTTTTTTGTTTTGTTTTGTTATAATC..........................................................................................................................................262.000.00-2.00--------------------------------
..........AGATATAGAGCTTGAACATCACAGAAG......................................................................................................................................................................................................................................................................................................................................................................2712.002.00----2.00-----------------------------
.......................................................................................................................................................................................................................................TTTTTTTGTTTTGTTTTGTTCTTC............................................................................................................................................242.000.00-2.00--------------------------------
......................................................................................................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTCTCT............................................................................................................................................252.000.00-1.001.00-------------------------------
...................................................................................................................................................................................................................................TCGTTTTTTTTGTTTTGTTTTGGT................................................................................................................................................242.000.001.001.00--------------------------------
.....................................................................................................................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTGC..............................................................................................................................................242.000.002.00---------------------------------
...................................................................................................................................................................................................................................TCGTTTTTTTTGTTTTGTTCTGG.................................................................................................................................................232.000.001.001.00--------------------------------
.................................................................................................................................TGGATGTTGGGAGAGGGCGGA.....................................................................................................................................................................................................................................................211.000.00------------------------1.00---------
.....................................................................................................................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTGCCG............................................................................................................................................261.000.001.00---------------------------------
.......................................................................................................................................................................................................................................TTTTTTTGTTTTGTTTTGTTCGGG............................................................................................................................................241.000.001.00---------------------------------
.....................................................................................................................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTCG..............................................................................................................................................241.000.001.00---------------------------------
..............................................................................................................................................................................................................................ATAGCTCGTTTTTTTTGTTTTGTTTTGTCAC..............................................................................................................................................311.000.001.00---------------------------------
...................................................................................................................................................................................................................................TCGTTTTTTTTGTTTTGTTTGG..................................................................................................................................................221.000.00-1.00--------------------------------
..................................................................................................................................................................................................................................CTCGTTTTTTTTGTTTTGTTTTGGTT...............................................................................................................................................261.000.001.00---------------------------------
....................................................AGTGTAAAGGCAGAAAGA.....................................................................................................................................................................................................................................................................................................................................181.000.00----------------------1.00-----------
..................................AAGCCAGGCAGAACAGGTAGCG...................................................................................................................................................................................................................................................................................................................................................221.000.00-1.00--------------------------------
........................................................................................................................................................................................................................................TTTTTTGTTTTGTTTTGTTGCTG............................................................................................................................................231.000.00-1.00--------------------------------
.......................................................................................................................................................................................................................................TTTTTTTGTTTTGTTTTGTTGGTG............................................................................................................................................241.000.001.00---------------------------------
.........................................................................................................................................................................................................................................TTTTTGTTTTGTTTTGTTAGGAG...........................................................................................................................................231.000.001.00---------------------------------
...............................................................................................................................................................................................................................TAGCTCGTTTTTTTTGTTTTGTTTTGCT................................................................................................................................................281.000.001.00---------------------------------
......................................................................................................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTCTTC............................................................................................................................................251.000.001.00---------------------------------
...................................................................................................................................................................................................................................TCGTTTTTTTTGTTTTGTTTAGAG................................................................................................................................................241.000.001.00---------------------------------
.....................................................................................................................................................................................................................................GTTTTTTTTGTTTTGTCGT...................................................................................................................................................191.000.001.00---------------------------------
..................................................................................................................................................AGAAAGTGGGATTAAGA........................................................................................................................................................................................................................................1711.001.00-------1.00--------------------------
.................................................................................................................................................................................ACTGTTTAGATTTTAGTT........................................................................................................................................................................................................1821.001.00----------------1.00-----------------
........................................................................AAAGAGATGATTGTGCTGA................................................................................................................................................................................................................................................................................................................191.000.00-----------------------1.00----------
...................................................................................................................................................................................................................................TCGTTTTTTTTGTTTTGTTTTGCT................................................................................................................................................241.000.001.00---------------------------------
.................................................................................................................................................................................................................................................................................................................................TTTTATTCTCTCTGCTTTTTTCAG..................................................2411.001.00--------------------------1.00-------
.....................................................................................................................................................................................................................................GTTTTTTTTGTTTTGTTTCGG.................................................................................................................................................211.000.00-1.00--------------------------------
.......................................................................................................................................................................................................................................TTTTTTTGTTTTGTTTTGTTGTC.............................................................................................................................................231.000.00-1.00--------------------------------
................................................................................................................................................................................................................................AGCTCGTTTTTTTTGTTTTGTTTCGTT................................................................................................................................................271.000.001.00---------------------------------
........................................................................................................................................................................................................................................................................................................................................CTCTCTGCTTTTTTCAACC................................................191.000.00--1.00-------------------------------
..................................................................................................................................................AGAAAGTGGGATTAACCGA......................................................................................................................................................................................................................................191.000.00-----------------1.00----------------
......................................................................................................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTCTGG............................................................................................................................................251.000.00-1.00--------------------------------
.........................................................................................................................................GGGAGAGGGAGAAAGTAT................................................................................................................................................................................................................................................181.000.00-------------1.00--------------------
.................................................................................................................................................................................................................................GCTCGTTTTTTTTGTTTTGTTTTGTTTTG.............................................................................................................................................291.000.001.00---------------------------------
...................................................................................................................................................................................................................................TCGTTTTTTTTGTTTTGTTTCGGT................................................................................................................................................241.000.00-1.00--------------------------------
..........................................CAGAACAGGTAGTGTGGA...............................................................................................................................................................................................................................................................................................................................................181.000.00------------------------------1.00---
...GAAATGCAGATATAGAGCTT....................................................................................................................................................................................................................................................................................................................................................................................2011.001.00---------------------1.00------------
......................................................................................................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTAGAC............................................................................................................................................251.000.00-1.00--------------------------------
...............................................................................................................................CATGGATGTTGGGAGCAGG.........................................................................................................................................................................................................................................................191.000.00----------------------------1.00-----
......................................................................................................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTCCGG............................................................................................................................................251.000.001.00---------------------------------
......................TGAACATCACAGAAGCCAGGCAGAACAGAATG.....................................................................................................................................................................................................................................................................................................................................................321.000.00--------------1.00-------------------
.....................................................................................................................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTCTG.............................................................................................................................................251.000.001.00---------------------------------
..................................................................................................................................................................................................................................CTCGTTTTTTTTGTTTTGTTTTGGTTT..............................................................................................................................................271.000.001.00---------------------------------
.......................................................................................................................................................................................................................................................................TCAAACTTTTCTTAATTGA.................................................................................................................191.000.00--1.00-------------------------------
.......................................................................................................................................................................................................................................TTTTTTTGTTTTGTTTTGTTCGAG............................................................................................................................................241.000.00-1.00--------------------------------
.....................................................................................................................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTCGCC............................................................................................................................................261.000.001.00---------------------------------
.......................................................................................................CCGTTATATCTTTTTATT..................................................................................................................................................................................................................................................................................181.000.00--1.00-------------------------------
.........................................................................................................................................................................................................................................TTTTTGTTTTGTTTTGTTACGTT...........................................................................................................................................231.000.00-1.00--------------------------------
......................................................................................................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTCGCC............................................................................................................................................251.000.00-1.00--------------------------------
..................................................................................................................................................................................................................................CTCGTTTTTTTTGTTTTGTTCTG..................................................................................................................................................231.000.00--1.00-------------------------------
......................................................................................................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTCG..............................................................................................................................................231.000.001.00---------------------------------
...............................................................................................................................CATGGATGTTGGGAGAAGGG........................................................................................................................................................................................................................................................201.000.00--------------------1.00-------------
...................................................................................................................................................................................................................................TCGTTTTTTTTGTTTTGTTTGC..................................................................................................................................................221.000.00-1.00--------------------------------
................................................................................................................................................GGAGAAAGTGGGATTAAGA........................................................................................................................................................................................................................................1911.001.00---------------1.00------------------
...................................................................CATTAAAAGAGATGATTGTGG...................................................................................................................................................................................................................................................................................................................2111.001.00-------------------1.00--------------
......................................................................................................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTCTCA............................................................................................................................................251.000.00-1.00--------------------------------
......................................................................................................................................................................................................................................TTTTTTTTGTTTTGTTTTGTTCGTT............................................................................................................................................251.000.00-1.00--------------------------------
.....................................................................................................................................................................................................................................GTTTTTTTTGTTTTGTTTTGTTGTA.............................................................................................................................................251.000.00-1.00--------------------------------
..............ATAGAGCTTGAACATC.............................................................................................................................................................................................................................................................................................................................................................................1620.500.50-------------------------------0.50--

Antisense strand
GTAGAAATGCAGATATAGAGCTTGAACATCACAGAAGCCAGGCAGAACAGGTAGTGTAAAGGCAGAACATTAAAAGAGATGATTGTGGTACTAAAGACAAAAACCGTTATATCTTTTTGCCTCTTACCATGGATGTTGGGAGAGGGAGAAAGTGGGATTAAGATCACCATCTGCTTTACTGTTTAGATTTTAGTTTATTTTTATGATTGCTGCTATGTCTTCATAGCTCGTTTTTTTTGTTTTGTTTTGTTATACTTAATTGATCAAACTTTTCTTAACTTGAAAATTATAGACTTGTGATATTTTGTTGAAAAAAATCAATTTTATTCTCTCTGCTTTTTTCAGAATGAATTTCTTTCAAGAGAACTAATTGAAAAAGAAAGAGATTTAGAAAG
....................................................((((((...((((((((.((((((((((((..(((((..((((((...............((((((.((((((.(((.......))))))))).))))))..(((((((((((.......((......))...))))))))))).))))))..))))).((((((....))))))))))))))))))...))))))))))))))...........................................................................................................................................
..................................................51...........................................................................................................................................................................................................256.........................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577738(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR040035(GSM532920)
G001T. (cervix)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
........CTGTGATGTTCAAGCTCTATATCTGC......................................................................................................................................................................................................................................................................................................................................................................... 2612.002.00--------2.00-------------------------
..............................................................................................................................................................................................................................................................................................................................CAATTTTATTCTCTCCTG........................................................... 182.000.00---2.00------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................AAAAAGAAAGAGATTATTG... 191.000.00-----------------------------1.00----
.................................ACACTACCTGTTCTGCCTGGCTTC.................................................................................................................................................................................................................................................................................................................................................. 2411.001.00-----------1.00----------------------
..............................................................................................................................................................................................................................ATAGCTCGTTTTTTTTGCG.......................................................................................................................................................... 191.000.00------------------1.00---------------
...................................................................................................................................................................................................................................TCGTTTTTTTTGTTTTCAGA.................................................................................................................................................... 201.000.00----------1.00-----------------------
............................................................................................................................................................................GCTTTACTGTTTAGAGTC............................................................................................................................................................................................................. 181.000.00-------1.00--------------------------
................................................................................................................................................................................................................................................................................................................................................................................AATTGAAAAAGAAAGTTG......... 181.000.00------------1.00---------------------
......................................................................................................................TCCATGGTAAGAGGC...................................................................................................................................................................................................................................................................... 1560.170.17--------------------------------0.17-
..........................................................................................................................................CCCACTTTCTCCCTCTCC............................................................................................................................................................................................................................................... 1870.140.14---------------------------------0.14