ID: uc001swr.1_intron_1_0_chr12_72083485_f.3p
GENE: TMEM19(2)
chr12:72090016-72090265+


(2)
B-CELL
(1)
BRAIN
(1)
BREAST
(1)
CELL-LINE
(1)
CERVIX
(9)
LIVER
(2)
OTHER
(1)
SKIN

Sense strand
AGATTAAAATATGGTAAAAAATGTGTACTCAAAATGGCATTCAGTTTACTGCTTGCTAAGAATTTAATTGGTAAAATGCAAATTGCTAGAAATGTACATTTCAGGTTATAATATAAAAATAATGGAAAAAATCCATTCTTTTTTCACAGCATTGATGTATGAATTGAATATAATTCTGTGTTTATATATGTTTCTTTCAGGGCTAGTCGTTGGATTTATCCTAACCATTGCAAATTTCAGCTTTTTTACC
.............................................................((((((((.(((.(((((..((.(((.(((((....))))).))).)).....(((((.((((((.....)))))).))))).....)))))....))).)))))))).................................................................................
........................................................57....................................................................................................................175.........................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR040025(GSM532910)
G613T. (cervix)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR189782SRR189785SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577745(Rovira)
total RNA. (breast)
.......................................................................................................................................................TTGATGTATGAATTGAGAGT...............................................................................2019.000.004.007.004.001.001.001.00-1.00----------
........................................................................................................................................................TGATGTATGAATTGACAGC...............................................................................199.000.001.001.001.00-4.001.00------1.00-----
.......................................................................................................................................................TTGATGTATGAATTGAGAGA...............................................................................205.000.00-2.001.00--2.00------------
.......................................................................................................................................................TTGATGTATGAATTGAGAGC...............................................................................204.000.001.001.00-1.00-1.00------------
.......................................................................................................................................................TTGATGTATGAATTGACAGC...............................................................................203.000.003.00-----------------
.......................................................................................................................................................TTGATGTATGAATTGATAGT...............................................................................203.000.00-2.00-----1.00----------
........................................................................................................................................................TGATGTATGAATTGAGAGA...............................................................................193.000.001.00-1.00----1.00----------
........................................................................................................................................................TGATGTATGAATTGACAGG...............................................................................193.000.002.00--1.00--------------
.......................................................................................................................................................TTGATGTATGAATTGACAG................................................................................192.000.00-1.00--------------1.00-
.............................................................ATTTAATTGGTAAAAGAG...........................................................................................................................................................................182.000.00--------2.00---------
.......................................................................................................................................................TTGATGTATGAATTGACAGT...............................................................................202.000.001.00-1.00---------------
.......................................................................................................................................................TTGATGTATGAATTGAGGGT...............................................................................202.000.001.00--1.00--------------
........................................................................................................................................................TGATGTATGAATTGACAGT...............................................................................192.000.00--1.001.00--------------
.......................................................................................................................................................TTGATGTATGAATTGAGAG................................................................................192.000.002.00-----------------
........................................................................................................................................................TGATGTATGAATTGAGAGT...............................................................................192.000.00--1.00-1.00-------------
........................................................................................................................................................................................................GGCTAGTCGTTGGATTTAT...............................1912.002.00------2.00-----------
........................................................................................................................................................TGATGTATGAATTGAAAGGA..............................................................................201.000.00---1.00--------------
........................................................................................................................................................TGATGTATGAATTGAGAGC...............................................................................191.000.00--1.00---------------
.......................................................................................................................................................TTGATGTATGAATTGAAAGCT..............................................................................211.000.00--1.00---------------
........................................................................................................................................................................................................GGCTAGTCGTTGGATTTATCCTAACCATTGCAAA................3411.001.00-----------------1.00
........................................................................................................................................................TGATGTATGAATTGAGAGG...............................................................................191.000.001.00-----------------
.......................................................................................................................................................TTGATGTATGAATTGATAGC...............................................................................201.000.00-1.00----------------
.......................................................................................................................................................TTGATGTATGAATTGAGGG................................................................................191.000.001.00-----------------
.......................................................................................................................................................................................................GGGCTAGTCGTTGGATTTA................................1911.001.00------1.00-----------
.......................................................................................................................................................TTGATGTATGAATTGACATT...............................................................................201.000.00-----1.00------------
........................................................................................................................................................TGATGTATGAATTGAAAGCC..............................................................................201.000.00----1.00-------------
.....................................................................................................................................................................................................................ATTTATCCTAACCATTGCAAATTTCAG..........2711.001.00-------------1.00----
........................................................................................................................................................TGATGTATGAATTGATAGA...............................................................................191.000.00---1.00--------------
.......................................................................................................................................................TTGATGTATGAATTGACAGA...............................................................................201.000.00-1.00----------------
.......................................................................................................................................................TTGATGTATGAATTGAAAGT...............................................................................201.000.00---------------1.00--
........................................................................................................................................................TGATGTATGAATTGAAAGA...............................................................................191.000.001.00-----------------
.......................................................................................................................................................TTGATGTATGAATTGAGATT...............................................................................201.000.00--1.00---------------
..............................................................................................................................................................................................................................AACCATTGCAAATTTCAGCT........2011.001.00-----1.00------------
.......................................................................................................................................................TTGATGTATGAATTGAGGTT...............................................................................201.000.001.00-----------------
.......................................................................................................................................................TTGATGTATGAATTGAAAGAA..............................................................................211.000.00---1.00--------------
.......................................................................................................................................................................................................GGGCTAGTCGTTGGATTTT................................191.000.00-----------1.00------

Antisense strand
AGATTAAAATATGGTAAAAAATGTGTACTCAAAATGGCATTCAGTTTACTGCTTGCTAAGAATTTAATTGGTAAAATGCAAATTGCTAGAAATGTACATTTCAGGTTATAATATAAAAATAATGGAAAAAATCCATTCTTTTTTCACAGCATTGATGTATGAATTGAATATAATTCTGTGTTTATATATGTTTCTTTCAGGGCTAGTCGTTGGATTTATCCTAACCATTGCAAATTTCAGCTTTTTTACC
.............................................................((((((((.(((.(((((..((.(((.(((((....))))).))).)).....(((((.((((((.....)))))).))))).....)))))....))).)))))))).................................................................................
........................................................57....................................................................................................................175.........................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR040025(GSM532910)
G613T. (cervix)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR189782SRR189785SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577745(Rovira)
total RNA. (breast)
...........................................................................................................................................................TGTATGAATTGAATATAATT........................................................................... 201.000.00--------------1.00---
..................................................................................................................................................................................................TTTCAGGGCTAGTCGA........................................ 161.000.00---------1.00--------
.....AAAATATGGTAAAAAATAAG................................................................................................................................................................................................................................. 201.000.00----------1.00-------