ID: uc001sof.1_intron_1_0_chr12_57881983_f.3p
GENE: MARS(2)
chr12:57882602-57882851+


(2)
B-CELL 		(19)
CELL-LINE 		(1)
HEART 		(1)
OTHER 		(2)
SKIN

Sense strand
AGTTTCAGCTGAACACCTGCTGGCCTCTCCAGCCCATTCCGGACCACCCCCTTTCAGTGGTCCTATCCTGGAACTTCTGGGTTGAGACTGCCCATCTTTCTTTTTTTACTCACTGAACAATGCAAGGTTATCCTAAGTTGACAAAGTATTTCTTTTCTTTTCCTTTTTTTTTTTTAACCCATTTTCCATTCTTGCATCAGATTGTGTGGTCCCGTTCCTGACCCGGCCTAAGGTCCCTGTCTTGCAGCTG
...............................................................................................................(((...((((...(((....)))..))))....))).......................................................................................................
......................................................................................87.......................................................................................176........................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189785SRR029127(GSM416756)
A549. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		GSM339994(GSM339994)
hues6. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189783SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTGTC..............................................................................2446.000.0035.0011.00--------------------------
.........................................................................................................................................................TTTCTTTTCCTTTTTTTTTTCCAG.........................................................................2438.000.00--19.0010.003.005.001.00---------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTCCAG........................................................................2614.000.00--5.004.002.003.00----------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTGTCT.............................................................................2513.000.006.007.00--------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTCCAG...........................................................................237.000.00--2.004.001.00-----------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCCACGG..................................................................247.000.00--3.004.00------------------------
...........................................................................................CCATCTTTCTTTTTTTATTG...........................................................................................................................................207.000.00--2.001.002.002.00----------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCCACTG..................................................................247.000.00--1.003.003.00-----------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTCCAG.........................................................................256.000.00--2.003.001.00-----------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTTGTC.............................................................................256.000.004.002.00--------------------------
.....................................................................................................................................................TTCTTTTCTTTTCCTTTTTTGTC..............................................................................236.000.005.001.00--------------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCCACCG..................................................................246.000.00--2.001.00-3.00----------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTAGT............................................................................235.000.00-1.00--1.00-3.00---------------------
..........................................................................................................................................................TTCTTTTCCTTTTTTTTTTCCAG.........................................................................235.000.00--2.001.001.001.00----------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTTTGCT.........................................................................265.000.00-5.00--------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTCCAT........................................................................264.000.00--4.00-------------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTAGT...........................................................................244.000.00------4.00---------------------
.....................................................................................................................................................TTCTTTTCTTTTCCTTTTTTTTTTGCT..........................................................................273.000.002.001.00--------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTCG..........................................................................243.000.00-----3.00----------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTTGC...........................................................................253.000.00-3.00--------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTCAG..........................................................................243.000.001.00--1.00-1.00----------------------
...................................................................................................................................................ATTTCTTTTCTTTTCCTTTTTTTTCTTG...........................................................................283.000.00----2.001.00----------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTTTGGC.........................................................................263.000.003.00---------------------------
..........................................................................................................................................................................................................TGTGTGGTCCCGTTCCTGACCCGGCATC....................283.000.00-------3.00--------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTAGTT...........................................................................243.000.003.00---------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTATTG.........................................................................253.000.00-----3.00----------------------
......................................................................................................................................................................................................AGATTGTGTGGTCCCGTT..................................1812.002.00----------2.00-----------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTAGTT...........................................................................232.000.00-2.00--------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTCCAT.........................................................................252.000.00--1.001.00------------------------
...................................................................................................................................................ATTTCTTTTCTTTTCCTTTTTTTTTTTTAGATC......................................................................332.000.00-2.00--------------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTTTTTTCTTG........................................................................302.000.001.00---1.00-----------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTTTTAG............................................................................262.000.00----2.00-----------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTCCG...........................................................................232.000.00---1.00-1.00----------------------
...........................................................................................................................................................TCTTTTCCTTTTTTTTTTAGCT.........................................................................222.000.00-2.00--------------------------
.............................................................................................................................................................TTTTCCTTTTTTTTTTTTATAG.......................................................................222.000.00--2.00-------------------------
...................................................................................................................................................ATTTCTTTTCTTTTCCTTTTTTTTTTTTTTG........................................................................312.000.00----1.001.00----------------------
..........................................................................................CCCATCTTTCTTTTTTTACTCACCG.......................................................................................................................................252.000.00--------2.00-------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTAATG.............................................................................252.000.002.00---------------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCCCCTG..................................................................242.000.00--1.00-1.00-----------------------
...........................................................................................................................................................TCTTTTCCTTTTTTTTTTCAG..........................................................................212.000.00--1.00--1.00----------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTCAAG.........................................................................252.000.00--2.00-------------------------
.........................................................................................................................................................TTTCTTTTCCTTTTTTTTTCCTG..........................................................................232.000.00--1.001.00------------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTTTGCT.........................................................................272.000.00-2.00--------------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTTTCGCG........................................................................281.000.001.00---------------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTTTCG..........................................................................251.000.00----1.00-----------------------
.............................................................................................................................................................TTTTCCTTTTTTTTTTTTACAAG......................................................................231.000.00--1.00-------------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTTTTTTTAG.........................................................................291.000.00----1.00-----------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTAGAG.............................................................................231.000.001.00---------------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTTTGC..........................................................................251.000.001.00---------------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTTTCCG.........................................................................271.000.00---1.00------------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTCTCT............................................................................231.000.00------1.00---------------------
..............................................................................................................................................................TTTCCTTTTTTTTTTTTAACCTG.....................................................................231.000.00--1.00-------------------------
............................................................................................................................................................CTTTTCCTTTTTTTTTTTTAACAG......................................................................241.000.00--1.00-------------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTTTTTTGAC.........................................................................291.000.00-1.00--------------------------
...............................................................................................................................................................TTCCTTTTTTTTTTTTAACTTCC....................................................................231.000.00--1.00-------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTGCAC........................................................................261.000.00--1.00-------------------------
............................................................................................................CTCACTGAACAATGCATGCA..........................................................................................................................201.000.00------------------1.00---------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTCAGT............................................................................231.000.00------1.00---------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACACG.....................................................................211.000.00-----1.00----------------------
..............................................................................................................................................................TTTCCTTTTTTTTTTTTACAG.......................................................................211.000.00----1.00-----------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTTGCT..........................................................................261.000.00-1.00--------------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCACTG...................................................................231.000.00-----1.00----------------------
............................................................................................................................................................CTTTTCCTTTTTTTTTTTTACAAG......................................................................241.000.00----1.00-----------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCTCCT...................................................................231.000.00---1.00------------------------
...................................................................................................................................................ATTTCTTTTCTTTTCCTTTTGTC................................................................................231.000.001.00---------------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTTTCG..........................................................................261.000.00-1.00--------------------------
........................................................................................................................................................................................................ATTGTGTGGTCCCGTTCCTGACCCG.........................2511.001.00----------------------1.00-----
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTCCAG...........................................................................241.000.00--1.00-------------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTTTCAG.........................................................................271.000.00----1.00-----------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTTCCCG.........................................................................261.000.00-1.00--------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTAACG.........................................................................251.000.001.00---------------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTTCGAG.........................................................................271.000.00-1.00--------------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTGTCC.............................................................................251.000.001.00---------------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCCCCCG..................................................................241.000.00-----1.00----------------------
.....................................................................................................................................................TTCTTTTCTTTTCCTTTTTTTTTAAG...........................................................................261.000.00-----1.00----------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTTTTAACAAG.....................................................................301.000.00-----1.00----------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTCAT.........................................................................251.000.00---1.00------------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTTTGGAG........................................................................281.000.001.00---------------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTTTTTCCG..........................................................................281.000.00----1.00-----------------------
..............................................................................................................................................................TTTCCTTTTTTTTTTTTAACCCACT...................................................................251.000.00-1.00--------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTCG.............................................................................211.000.00-----1.00----------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTTTTTTGGAG........................................................................301.000.00-1.00--------------------------
..............................................................................................................................................................TTTCCTTTTTTTTTTTTAACTCGG....................................................................241.000.00-1.00--------------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTGCCT.............................................................................251.000.001.00---------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTCCTG..........................................................................241.000.00----1.00-----------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCCACCTG.................................................................251.000.00---1.00------------------------
.....................................................................................................................................................TTCTTTTCTTTTCCTTTTTTTTTTCCG..........................................................................271.000.00----1.00-----------------------
............................................................................................................................................................CTTTTCCTTTTTTTTTTTTAACATAG....................................................................261.000.00--1.00-------------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTAGAT..........................................................................251.000.00-1.00--------------------------
...............................................................................................................................................................TTCCTTTTTTTTTTTTAACCTCCT...................................................................241.000.00--1.00-------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTCCCG..........................................................................241.000.00-1.00--------------------------
.........................................................................................................................................................TTTCTTTTCCTTTTTTTTTTTTACG........................................................................251.000.00----1.00-----------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTTTTCCT...........................................................................271.000.00-1.00--------------------------
.............................................................................................................................................................TTTTCCTTTTTTTTTTTTAACTAG.....................................................................241.000.00-----1.00----------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTTTCCCC........................................................................281.000.00-1.00--------------------------
.....................................................................................................................................................TTCTTTTCTTTTCCTTTTTTTTTTATA..........................................................................271.000.001.00---------------------------
.............................................................................................................................................................TTTTCCTTTTTTTTTTTTAACTTG.....................................................................241.000.00----1.00-----------------------
.....................................................................................................................................................TTCTTTTCTTTTCCTTTTTTTTAGTT...........................................................................261.000.00-1.00--------------------------
.........................................................................................................................................................TTTCTTTTCCTTTTTTTTTCGG...........................................................................221.000.00-1.00--------------------------
..................................................................................................................................................TATTTCTTTTCTTTTCGATA....................................................................................201.000.00--------1.00-------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTGGCC........................................................................261.000.00-1.00--------------------------
.....................................................................................................................................................TTCTTTTCTTTTCCTTTTTTTTTGCT...........................................................................261.000.001.00---------------------------
.....................................................................................................................................................TTCTTTTCTTTTCCTTTTTTTTTTCAG..........................................................................271.000.00---1.00------------------------
.........................................................................................................................................................TTTCTTTTCCTTTTTTTTTTCCAT.........................................................................241.000.00--1.00-------------------------
................................................................................................................................................AGTATTTCTTTTCTTTCCCG......................................................................................201.000.00-1.00--------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTTATTTG......................................................................281.000.00-----1.00----------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTCAAT.........................................................................251.000.00--1.00-------------------------
.............................................................................................................................................................TTTTCCTTTTTTTTTTTTACTC.......................................................................221.000.00------1.00---------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCCTCCG..................................................................241.000.00--1.00-------------------------
.....................................................................................................................................................TTCTTTTCTTTTCCTTTTTTATTG.............................................................................241.000.00---1.00------------------------
...............................................................................................................................................AAGTATTTCTTTTCTTTTCCTTTTTTTTTC.............................................................................301.000.00-1.00--------------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCCACC...................................................................231.000.00---1.00------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTCTTG........................................................................261.000.00----1.00-----------------------
............................................................................................................................................................CTTTTCCTTTTTTTTTTTTAATTTG.....................................................................251.000.00---1.00------------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTTTTTCG...........................................................................271.000.00-----1.00----------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTATG..........................................................................241.000.001.00---------------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTTTTTTCCG.........................................................................291.000.00----1.00-----------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCCAACTG.................................................................251.000.00--1.00-------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTGCC.........................................................................251.000.001.00---------------------------
..................................................................................................................................................TATTTCTTTTCTTTTCCTTTTTTTTTTTTG..........................................................................301.000.00-----1.00----------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCCACAG..................................................................241.000.00----1.00-----------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTTGTCT............................................................................261.000.001.00---------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTGCAG........................................................................261.000.001.00---------------------------
...........................................................................................CCATCTTTCTTTTTTTTTTG...........................................................................................................................................201.000.00--1.00-------------------------
...............................................................................................................................................................TTCCTTTTTTTTTTTTACAG.......................................................................201.000.00----1.00-----------------------
......................................................................................................................................................................TTTTTTTTTAACCCATTTTCCATTCTTG........................................................2811.001.00----1.00-----------------------
..........................................................................................................................................................................................................................TGACCCGGCCTAAGGACG..............181.000.00--------------------1.00-------
...........................................................................................................................................................TCTTTTCCTTTTTTTTTTTTAGCT.......................................................................241.000.00-1.00--------------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTTTGCAG........................................................................281.000.00-1.00--------------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTTTCTG............................................................................261.000.00-1.00--------------------------
...................................................................................................................................................................TTTTTTTTTTTTAACCCGGGG..................................................................211.000.00-1.00--------------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCCACTGG.................................................................251.000.00---1.00------------------------
............................................................................................CATCTTTCTTTTTTTAGG............................................................................................................................................181.000.00---1.00------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTCCG..........................................................................241.000.00-----1.00----------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCCAACGG.................................................................251.000.00---1.00------------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTTCCT..........................................................................261.000.001.00---------------------------
.........................................................................................................................................................TTTCTTTTCCTTTTTTTTTCTGC..........................................................................231.000.001.00---------------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTTTTTTCTG.........................................................................291.000.00-----1.00----------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTTTTCG............................................................................261.000.00----1.00-----------------------
...........................................................................................CCATCTTTCTTTTTTTTAG............................................................................................................................................191.000.00-----1.00----------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTTTTTTCGC..........................................................................281.000.00-1.00--------------------------
...................................................................................................................................................ATTTCTTTTCTTTTCCTTTTTTTTGG.............................................................................261.000.00-1.00--------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTCTAG...........................................................................231.000.00-----1.00----------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTTGGAG.........................................................................261.000.00-1.00--------------------------
..................................................................................................................................................................CTTTTTTTTTTTTAACCCATTACAG...............................................................251.000.00--1.00-------------------------
...........................................................................................................................................................TCTTTTCCTTTTTTTTAAGT...........................................................................201.000.00------1.00---------------------
............................................................................................................................................................CTTTTCCTTTTTTTTTTTTATTG.......................................................................231.000.00-1.00--------------------------
.................................................................................................................................................................CCTTTTTTTTTTTTAACCACTA...................................................................221.000.00--1.00-------------------------
...........................................................................................CCATCTTTCTTTTTTTATC............................................................................................................................................191.000.00----1.00-----------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTCAT..........................................................................241.000.00----1.00-----------------------
...........................................................................................................................................................TCTTTTCCTTTTTTTTTTTTACCAG......................................................................251.000.00-----1.00----------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTTTTGGGG..............................................................................241.000.00-1.00--------------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTTTTAATG.......................................................................281.000.00--1.00-------------------------
.........................................................................................................................................................................TTTTTTAACCCATTTTTATA.............................................................201.000.00-----------------------1.00----
.........................................................................................................................................................TTTCTTTTCCTTTTTTTTTTTTACAG.......................................................................261.000.00----1.00-----------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTGGG...........................................................................251.000.00-1.00--------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTCCCG........................................................................261.000.00---1.00------------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCTTG....................................................................221.000.00--1.00-------------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCAACT...................................................................231.000.00--1.00-------------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTTTCTTG........................................................................271.000.00-----1.00----------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTGC............................................................................241.000.00-1.00--------------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTTTTATT........................................................................281.000.00---1.00------------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTTCCAG.........................................................................261.000.00----1.00-----------------------
.......................CCTCTCCAGCCCATTCCA.................................................................................................................................................................................................................181.000.00---------------------1.00------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTCTAG............................................................................241.000.00-1.00--------------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCCGG....................................................................221.000.00----1.00-----------------------
.........................................................................................................................................................TTTCTTTTCCTTTTTTTTTCCAA..........................................................................231.000.00----1.00-----------------------
..........................................................................................................................................................TTCTTTTCCTTTTTTTTTTTTATGAG......................................................................261.000.001.00---------------------------
..........................................................................................................................................................TTCTTTTCCTTTTTTTTTTTTAAAAG......................................................................261.000.00---1.00------------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTTCCTC.........................................................................261.000.00-1.00--------------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTAGTT..........................................................................251.000.001.00---------------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTTGCC..........................................................................261.000.001.00---------------------------
....................................................................................................................................................TTTCTTTTCTTTTCCTTGGAG.................................................................................211.000.00-1.00--------------------------
..........................................................................................................................................................TTCTTTTCCTTTTTTTTTCTAG..........................................................................221.000.00----1.00-----------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTCCTC........................................................................261.000.001.00---------------------------
....................................................................................AGACTGCCCATCTTTCTTTTTTAGGG............................................................................................................................................261.000.00-1.00--------------------------
.........................................................................................................................................................TTTCTTTTCCTTTTTTTTTTCTAG.........................................................................241.000.00-----1.00----------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTTTTAATG.......................................................................291.000.00----1.00-----------------------
.....................................................................................................................................................TTCTTTTCTTTTCCTTTTTTTTTTTCTCC........................................................................291.000.00-1.00--------------------------
...................................ATTCCGGACCACCCCCC......................................................................................................................................................................................................171.000.00-----------1.00----------------
.........................................................................................................................................................TTTCTTTTCCTTTTTTTTTTCAG..........................................................................231.000.00--1.00-------------------------
.............................................................................................................................................................TTTTCCTTTTTTTTTTTTAACATG.....................................................................241.000.00------1.00---------------------
.........................................................................................................................................................TTTCTTTTCCTTTTTTTTTTCGAG.........................................................................241.000.00-1.00--------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTCAAG........................................................................261.000.00----1.00-----------------------
.....................................................................................................................................................TTCTTTTCTTTTCCTTTTTTTTTTGC...........................................................................261.000.001.00---------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTCTGA...........................................................................231.000.00-1.00--------------------------
............................................................................................................................................................CTTTTCCTTTTTTTTTTTTAGT........................................................................221.000.00------1.00---------------------
.............................................................................................................................................................TTTTCCTTTTTTTTTTTTACAGC......................................................................231.000.001.00---------------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTTTCCAG........................................................................271.000.00--1.00-------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTCTAG........................................................................261.000.00-----1.00----------------------
.....................................................................................................................................................TTCTTTTCTTTTCCTTTTTTTTTTTGGA.........................................................................281.000.001.00---------------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTTTTTTCC..........................................................................261.000.00-1.00--------------------------
...................................................................................................................................................ATTTCTTTTCTTTTCCTTTTTTTTTTGAG..........................................................................291.000.00-1.00--------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTCTAT........................................................................261.000.00---1.00------------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTTCG...........................................................................241.000.00-----1.00----------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTGCTT........................................................................261.000.00-1.00--------------------------
...................................................................................................................................................ATTTCTTTTCTTTTCCTTTTTTTTTTCTG..........................................................................291.000.00----1.00-----------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCCAG....................................................................221.000.00---1.00------------------------
.........................................................................................................................................................TTTCTTTTCCTTTTTTTTTTTTAACCAG.....................................................................281.000.00----1.00-----------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTATG...............................................................................211.000.00-----1.00----------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTGGTG.............................................................................231.000.001.00---------------------------
................................................................................................................................................................TCCTTTTTTTTTTTTAACCCCCCT..................................................................241.000.00--1.00-------------------------
..........................................................................................................................................................TTCTTTTCCTTTTTTTTTTCAG..........................................................................221.000.00--1.00-------------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTTTCCAA........................................................................261.000.00-----1.00----------------------
.......................................................................................................................................................................................................GATTGTGTGGTCCCGTTCCTGACCCG.........................2611.001.00------------------------1.00---
..........................................................................................CCCATCTTTCTTTTTTTTTTG...........................................................................................................................................211.000.00----1.00-----------------------
......................................................................................................................................................TCTTTTCTTTTCCTTTTTTGTC..............................................................................221.000.001.00---------------------------
...........................................................................................................................................................TCTTTTCCTTTTTTTTTTCCAG.........................................................................221.000.00-1.00--------------------------
...........................................................................................................................................................TCTTTTCCTTTTTTTTTTATTG.........................................................................221.000.00---1.00------------------------
.......................................................................................................................................................CTTTTCTTTTCCTTTTTTTTTTTCATG........................................................................271.000.00-----1.00----------------------
........................................................................................................................................................TTTTCTTTTCCTTTTTTTTTCTCG..........................................................................241.000.00----1.00-----------------------
.....................................................................................................................................................TTCTTTTCTTTTCCTTTTTTTTTTTCTTG........................................................................291.000.00-----1.00----------------------
...................................................................................................................................................ATTTCTTTTCTTTTCCTTTTTTTTTTTTTCG........................................................................311.000.001.00---------------------------
.....................................................................................................................................................TTCTTTTCTTTTCCTTTTTTTTTTTTAG.........................................................................2830.330.33--0.33-------------------------
.....................................................................................................................................................TTCTTTTCTTTTCCTTTTTTTTTTTTA..........................................................................2730.330.330.33---------------------------
..................................................................................................................................................TATTTCTTTTCTTTTCCTTTTTTTTT..............................................................................2680.120.120.12---------------------------

Antisense strand
AGTTTCAGCTGAACACCTGCTGGCCTCTCCAGCCCATTCCGGACCACCCCCTTTCAGTGGTCCTATCCTGGAACTTCTGGGTTGAGACTGCCCATCTTTCTTTTTTTACTCACTGAACAATGCAAGGTTATCCTAAGTTGACAAAGTATTTCTTTTCTTTTCCTTTTTTTTTTTTAACCCATTTTCCATTCTTGCATCAGATTGTGTGGTCCCGTTCCTGACCCGGCCTAAGGTCCCTGTCTTGCAGCTG
...............................................................................................................(((...((((...(((....)))..))))....))).......................................................................................................
......................................................................................87.......................................................................................176........................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189785SRR029127(GSM416756)
A549. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		GSM339994(GSM339994)
hues6. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189783SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
.............................................................................................................................................................................................................................ACAGGGACCTTAGGCCGGG.......... 1913.003.00---------3.00------------------
....................................................................................................................................................................TTTTTTTTTTTAACCCATTTT................................................................. 211.000.00-----------------1.00----------
.................................................................................................................................................................CCTTTTTTTTTTTTAACGATC.................................................................... 211.000.00-------1.00--------------------
......................................................................................................................................................................................................................................AGGTCCCTGTCTTGCGAAA. 191.000.00--------------1.00-------------
.......................CCTCTCCAGCCCATTCAATG............................................................................................................................................................................................................... 201.000.00------------1.00---------------
...................................................................................................................................................................................................................AGGGACCTTAGGCCGGGTCAGGAACGG............ 2711.001.00----------------1.00-----------
..............................................ATAGGACCACTGAAAGGGGG........................................................................................................................................................................................ 2011.001.00-------------------------1.00--
...................................................................................................................................................................GGGTTAAAAAAAAAAAA...................................................................... 1701.001.00-------------1.00--------------
.................................................................................................................................................GTATTTCTTTTCTTTTCT....................................................................................... 181.000.00-------------------1.00--------
.....................................................................................................................................................................................................................................CTGCAAGACAGGGACCTT... 1811.001.00---------------1.00------------
.....................................................GGATAGGACCACTGA...................................................................................................................................................................................... 1540.500.50--------------------------0.50-
......................AATGGGCTGGAGAGGC.................................................................................................................................................................................................................... 1650.200.20---------------------------0.20