ID: uc001sns.2_intron_22_0_chr12_57789602_r.5p
GENE: R3HDM2(1)
chr12:57824303-57824552-


(1)
AGO2.ip
(4)
B-CELL
(2)
BRAIN
(13)
BREAST
(26)
CELL-LINE
(10)
CERVIX
(5)
HEART
(2)
HELA
(7)
LIVER
(1)
OTHER
(1)
OVARY
(1)
RRP40.ip
(27)
SKIN
(1)
XRN.ip

Sense strand
CGGGCGGCGGGCGGAGACGTGGGCGCCCTCCCCGCCAAGGCCCGTGCGAGGTGAGGCCACCTCCCGGCCGAGGGGGCGGGCGGCCCGGACGGCCTGTGGGGAGGGGGCGTGGCGGCCGCACGGGCGGGCGCGAGGAGGCCCCGCGGCCTGGGTTCCTCGCGCCCGGCAGCCGGTCCCGGGGACGATGGGTCAGGGTCGGATGGCCGCGGGAAGGACTGCTCCAAGTGTGCGCTGCTGGAGAGAAGCTGGG
............................................................................................................................((((((((((((.((((........))))))))))))))))....((((.(((...(((.....))).)))))))...................................................
...........................................................................................................................124.........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
TAX577588(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSE20417(GSM514985)
Colon and lung cancer pool.
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
GSM532889(GSM532889)
G576N. (cervix)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR040021(GSM532906)
G761T_2. (cervix)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR029129(GSM416758)
SW480. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM532884(GSM532884)
G871T. (cervix)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577742(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
GSM379268(GSM379268)
Small RNA from serous ovarian cancer tissue. (ovary)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
...................................................................................................................................................................................................................AGGACTGCTCCAAGTGTG.....................18111.0011.0010.00--------------------1.00------------------------------------------------------------------------------
...............................................................................................................................................................................CCGGGGACGATGGGTCA..........................................................1716.006.00--------3.00--------------1.00--------------------------1.00----------------------1.00--------------------------
................................................................................................................................CGCGAGGAGGCCCCGGGC........................................................................................................185.000.00------------3.00-----------------------------1.001.00--------------------------------------------------------
............................................................................................................................................CCGCGGCCTGGGTTCGATT...........................................................................................1934.000.67----------4.00-----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................GGGAAGGACTGCTCCAAGTG.......................2014.004.00-----1.00-------3.00--------------------------------------------------------------------------------------
............................................................................................................................................................................................GTCAGGGTCGGATGGCCGCG..........................................2013.003.003.00---------------------------------------------------------------------------------------------------
..............................................................................................................................................................................CCCGGGGACGATGGGTCA..........................................................1813.003.00------------------1.00----1.00---------1.00------------------------------------------------------------------
.....................................................................................................................GCACGGGCGGGCGCGCG....................................................................................................................173.000.00--------------1.00---------2.00---------------------------------------------------------------------------
..................................................................................................................................................................................................GTCGGATGGCCGCGGGAAGGA...................................2113.003.00-----1.00-1.00-----------------------------------------------------1.00--------------------------------------
..................................................................................................................................................................................GGGACGATGGGTCAGGGTC.....................................................1912.002.00-----------2.00----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................CTCCAAGTGTGCGCTGCTGG............2012.002.00-----2.00----------------------------------------------------------------------------------------------
................................................................................................................................................................................CGGGGACGATGGGTCAGG........................................................1812.002.00--------2.00-------------------------------------------------------------------------------------------
........................................................................................................................................................TTCCTCGCGCCCGGCAGCCGGT............................................................................2212.002.00-------2.00--------------------------------------------------------------------------------------------
.......................................................................................................................................................GTTCCTCGCGCCCGGCAGCCGGTT...........................................................................242.000.00-----------------------------------------1.00-------------------------1.00--------------------------------
.........................................................................................CGGCCTGTGGGGAGGTCGC..............................................................................................................................................191.000.00--------------------------------------------------------------1.00-------------------------------------
..GGCGGCGGGCGGAGACAA......................................................................................................................................................................................................................................181.000.00-------------------1.00--------------------------------------------------------------------------------
......GCGGGCGGAGACGTGGGCG.................................................................................................................................................................................................................................1911.001.00----------------------------------------------------------------------------------------1.00-----------
..........................................................................................................................................................................................GGGTCAGGGTCGGAT.................................................1511.001.00---------------------------------------------1.00------------------------------------------------------
........................................................................................................................CGGGCGGGCGCGAGGAGGCCCC............................................................................................................2211.001.00---------------------------------------------------------1.00------------------------------------------
..................................................................................................................................................................................................................AAGGACTGCTCCAAGTGTGC....................2011.001.00---------------------------------------------------------------------------------------1.00------------
.......................................................................................................................................................................................................ATGGCCGCGGGAAGGACTG................................1911.001.00----------------------------------------------------------------------1.00-----------------------------
.....................................................................................................................................................................................................GGATGGCCGCGGGAAGGA...................................1811.001.00---------------------------------------------------------------------------1.00------------------------
..............................................................................................................................................................................................CAGGGTCGGATGGCCGCGGGAAGGA...................................2511.001.00-----1.00----------------------------------------------------------------------------------------------
.....................................................................GAGGGGGCGGGCGGCCGCC..................................................................................................................................................................191.000.00-----------------------------------------------------1.00----------------------------------------------
..............................................................................................................................................................................................................CGGGAAGGACTGCTCCAAGTGTGCG...................2511.001.00-------------------------------------------------------------------------------------1.00--------------
.................................................................................................................................................................................................................GAAGGACTGCTCCAAGTG.......................1811.001.00--------------------------1.00-------------------------------------------------------------------------
..............................................................................................................................................................................................CAGGGTCGGATGGCCGC...........................................1711.001.001.00---------------------------------------------------------------------------------------------------
............................................................................................................................................................................GTCCCGGGGACGATGGGTCAGGGTCGGATGGC..............................................3211.001.00---------1.00------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................ATGGCCGCGGGAAGGAAGGA...............................201.000.00----------------------------------------------------------------1.00-----------------------------------
....CGGCGGGCGGAGACGTGGGCG.................................................................................................................................................................................................................................2111.001.00---------------1.00------------------------------------------------------------------------------------
.............................................................................GGGCGGCCCGGACGGCAG...........................................................................................................................................................181.000.00--------------------------------------------------------1.00-------------------------------------------
.................................................................................................................................................................................................................GAAGGACTGCTCCAAGTGTG.....................2011.001.00--------------------------------------------------------------------------------1.00-------------------
.........................................................................................CGGCCTGTGGGGAGGGTT...............................................................................................................................................181.000.00-----------1.00----------------------------------------------------------------------------------------
................................................................................................................................CGCGAGGAGGCCCCGAG.........................................................................................................171.000.00---------------------------------------------------------------------------------1.00------------------
.....................................................................................................AGGGGGCGTGGCGGCCTGT..................................................................................................................................191.000.00------1.00---------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................GCGGGAAGGACTGCTCCAAGTG.......................2211.001.00-------1.00--------------------------------------------------------------------------------------------
.......................................................................GGGGGCGGGCGGCCCGA..................................................................................................................................................................171.000.00------1.00---------------------------------------------------------------------------------------------
............................................................................................................................................................................................GTCAGGGTCGGATGGC..............................................1611.001.00-----------------------------------------------------------------------------------------1.00----------
................................................................................................TGGGGAGGGGGCGTGGCGGGGA....................................................................................................................................221.000.00-------------------1.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................CCGCGGGAAGGACTGCTCCAAGTGTGCGCTGCT..............3311.001.00---------------1.00------------------------------------------------------------------------------------
....................................................................CGAGGGGGCGGGCGGTGGC...................................................................................................................................................................191.000.00------------------------------1.00---------------------------------------------------------------------
........................................................................................................................................................................................ATGGGTCAGGGTCGGATGGCCG............................................2211.001.00------------------------------------------------------------------------------------------1.00---------
....................................................................................................................................................................................................CGGATGGCCGCGGGAAGG....................................1811.001.00--------------------------------------------------------------------------------------1.00-------------
................................................................................................................................CGCGAGGAGGCCCCGGG.........................................................................................................171.000.00--------------------------------------------------------------------------1.00-------------------------
......GCGGGCGGAGACGTGGGCGCCCTCC...........................................................................................................................................................................................................................2511.001.00---1.00------------------------------------------------------------------------------------------------
.....................................................................................................................................GGAGGCCCCGCGGCCCCGT..................................................................................................191.000.00------1.00---------------------------------------------------------------------------------------------
........GGGCGGAGACGTGGGCG.................................................................................................................................................................................................................................1711.001.00----------------------1.00-----------------------------------------------------------------------------
.........................CCCTCCCCGCCAAGGCCCGTGCG..........................................................................................................................................................................................................2311.001.00----------------1.00-----------------------------------------------------------------------------------
.GGGCGGCGGGCGGAGAAAA......................................................................................................................................................................................................................................191.000.00-------------------------------------------------------1.00--------------------------------------------
...................................................................................................................CCGCACGGGCGGGCGCGAGGAGGCCCCGC..........................................................................................................2911.001.00-----------------------------------------------1.00----------------------------------------------------
.......................................................................................................................................................GTTCCTCGCGCCCGGCA..................................................................................1711.001.00------------------------------------------------1.00---------------------------------------------------
...............................................................................................................................................................................................AGGGTCGGATGGCCGCGG.........................................1811.001.00---------------------------------------------------1.00------------------------------------------------
..................................................................................................................................................................................................GTCGGATGGCCGCGG.........................................1511.001.00---------1.00------------------------------------------------------------------------------------------
..............................................................................................TGTGGGGAGGGGGCG.............................................................................................................................................1501.001.00--------------------------------------------1.00-------------------------------------------------------
.............................................................................................................................................................................TCCCGGGGACGATGGGTCA..........................................................1911.001.00------------------1.00---------------------------------------------------------------------------------
..............................................................................................................................................................................................................CGGGAAGGACTGCTCCAAGTG.......................2111.001.00---------1.00------------------------------------------------------------------------------------------
.................................................................................................................................................................................GGGGACGATGGGTCAGGG.......................................................1811.001.00-----------------------------------------------------------------------1.00----------------------------
.......CGGGCGGAGACGTGGGCG.................................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------------------1.00----------------
........................................................................................................................................................................................................TGGCCGCGGGAAGGACTGCTCCAAGTGTGCGC..................3211.001.00----------------1.00-----------------------------------------------------------------------------------
................................................................................................................................................................................CGGGGACGATGGGTCAGGGTCGGATG................................................2611.001.00-------1.00--------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CGGGAAGGACTGCTCCAAT.........................191.000.00-----1.00----------------------------------------------------------------------------------------------
....................................................................................................................................................................................GACGATGGGTCAGGGTCGGATGGC..............................................2411.001.00------------------------------------------------------------------------------1.00---------------------
.............................................................................................................................................................................................TCAGGGTCGGATGGCGGG...........................................181.000.00----------------------------------------1.00-----------------------------------------------------------
...........................................................................................................................GCGGGCGCGAGGAGGAG..............................................................................................................171.000.00------------------------------------------------------------------1.00---------------------------------
.....................................................................................................................................................................................ACGATGGGTCAGGGTCGGATGGC..............................................2311.001.00---1.00------------------------------------------------------------------------------------------------
.......................................................................GGGGGCGGGCGGCCCGGCC................................................................................................................................................................191.000.00------1.00---------------------------------------------------------------------------------------------
.......................................................................................................................ACGGGCGGGCGCGAGGAGGCC..............................................................................................................2111.001.00-------------------------------------------------------------------------------1.00--------------------
........................................................................................................................................................TTCCTCGCGCCCGGCAGC................................................................................1811.001.00-1.00--------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................GGGTCAGGGTCGGATGGC..............................................1811.001.00------------------------------------------------------------1.00---------------------------------------
...................................................................................................................................................................................................................AGGACTGCTCCAAGTGTGCGCTGCTGGAGA.........3011.001.00-------------------------------------1.00--------------------------------------------------------------
............................................................................................................................................................................GTCCCGGGGACGATGGGTCAGG........................................................2211.001.00-------------------------------1.00--------------------------------------------------------------------
............................................................................................................................................CCGCGGCCTGGGTTCCAAT...........................................................................................191.000.00----------------------------1.00-----------------------------------------------------------------------
...........................................................................................................................................................................GGTCCCGGGGACGATGGGTCA..........................................................2111.001.00----------------------------------------------------------1.00-----------------------------------------
..............................................................................................................................................................................CCCGGGGACGATGGGTC...........................................................1711.001.00----------------------------------------------1.00-----------------------------------------------------
............................................................................................................................................CCGCGGCCTGGGTTC...............................................................................................1530.670.67-------------------------0.330.33-------------------------------------------------------------------------
............................................................................................................................................CCGCGGCCTGGGTTCGTT............................................................................................1830.670.67----------------------------------------------------------------------------------------------0.330.33----
....................................................................................................................CGCACGGGCGGGCGC.......................................................................................................................1520.500.50---------------------------------------------------------------------------------------------0.50------
............................................................................................................................................CCGCGGCCTGGGTTCGAT............................................................................................1830.330.67------------------------------------------------------------------------------------------------0.33---
..GGCGGCGGGCGGAGA.........................................................................................................................................................................................................................................1550.200.20-------------------------------------------------------------------------------------------------0.20--
..GGCGGCGGGCGGAGAAAA......................................................................................................................................................................................................................................1850.200.20--------------------------------------------------------------------------------------------------0.20-
..GGCGGCGGGCGGAGATGG......................................................................................................................................................................................................................................1850.200.20------0.20---------------------------------------------------------------------------------------------
..........................CCTCCCCGCCAAGGC.................................................................................................................................................................................................................1590.110.11---------------------------------------------------------------------------------------------------0.11

Antisense strand
CGGGCGGCGGGCGGAGACGTGGGCGCCCTCCCCGCCAAGGCCCGTGCGAGGTGAGGCCACCTCCCGGCCGAGGGGGCGGGCGGCCCGGACGGCCTGTGGGGAGGGGGCGTGGCGGCCGCACGGGCGGGCGCGAGGAGGCCCCGCGGCCTGGGTTCCTCGCGCCCGGCAGCCGGTCCCGGGGACGATGGGTCAGGGTCGGATGGCCGCGGGAAGGACTGCTCCAAGTGTGCGCTGCTGGAGAGAAGCTGGG
............................................................................................................................((((((((((((.((((........))))))))))))))))....((((.(((...(((.....))).)))))))...................................................
...........................................................................................................................124.........................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
TAX577588(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSE20417(GSM514985)
Colon and lung cancer pool.
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
GSM532889(GSM532889)
G576N. (cervix)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR040021(GSM532906)
G761T_2. (cervix)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR029129(GSM416758)
SW480. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577739(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM532884(GSM532884)
G871T. (cervix)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577742(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
GSM379268(GSM379268)
Small RNA from serous ovarian cancer tissue. (ovary)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
........................................................................................................................................................................ATCGTCCCCGGGACCGGC................................................................ 18112.0012.00-8.00--2.00---------------2.00-------------------------------------------------------------------------------
....CGGCGGGCGGAGACGGCCC................................................................................................................................................................................................................................... 196.000.00--3.002.00----------------------------------1.00-------------------------------------------------------------
....CGGCGGGCGGAGACGGCC.................................................................................................................................................................................................................................... 186.000.00--1.001.00------------------1.00----------------------------------------1.00-1.00--1.00-------------------------------
....CGGCGGGCGGAGACGGC..................................................................................................................................................................................................................................... 175.000.00--2.00-----------------------------1.00---1.00------------1.00--------------------------------------------------
........................................................................................................................................................................TCGTCCCCGGGACCGGC................................................................. 1713.003.00----3.00-----------------------------------------------------------------------------------------------
.....GGCGGGCGGAGACGTCGCT.................................................................................................................................................................................................................................. 192.000.00---------------------------1.00-------1.00----------------------------------------------------------------
........GGGCGGAGACGTGGGCCC................................................................................................................................................................................................................................ 181.000.00-----------------1.00----------------------------------------------------------------------------------
.......................................................................................................................................................GTTCCTCGCGCCCGGTCTG................................................................................ 191.000.00------------------------------------------------------------------------1.00---------------------------
....CGGCGGGCGGAGACGGCTC................................................................................................................................................................................................................................... 191.000.00---------------------------------------------------------------------1.00------------------------------
..........................CGGGCCTTGGCGGGGAGG.............................................................................................................................................................................................................. 1811.001.00-------------------------------------------------------------------------------------------1.00--------
....................................................................................................................................AGGAGGCCCCGCGGCCGTA................................................................................................... 191.000.00-----------------1.00----------------------------------------------------------------------------------
...................................................................................................................................................CGGGCGCGAGGAACCCAG..................................................................................... 1811.001.00------------------------------------------------------1.00---------------------------------------------
....................................................................................................................................AGGAGGCCCCGCGGCCGGA................................................................................................... 191.000.00----------------------------------1.00-----------------------------------------------------------------
.........................................................................................................................................................................................CGGCCATCCGACCCTGACCCA............................................ 2111.001.00---------------------1.00------------------------------------------------------------------------------
....CGGCGGGCGGAGACGGACA................................................................................................................................................................................................................................... 191.000.00-----------------------------1.00----------------------------------------------------------------------
.......................................................................................................................................................................ATCGTCCCCGGGACCGGCT................................................................ 1911.001.00-1.00--------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................TCCGACCCTGACCCATCGT.................................................. 1911.001.00-------------------------1.00--------------------------------------------------------------------------
........................................................................GGGGCGGGCGGCCCGGTC................................................................................................................................................................ 181.000.00---------------------------------------1.00------------------------------------------------------------
........................................................................................................................................................................CATCGTCCCCGGGACCGGC............................................................... 1911.001.00-----------------------------------------------------------------------------1.00----------------------
.....GGCGGGCGGAGACGTCGC................................................................................................................................................................................................................................... 181.000.00--------------1.00-------------------------------------------------------------------------------------
........GGGCGGAGACGTGGGCCC................................................................................................................................................................................................................................ 181.000.00------------------------------------------------------------------------------------1.00---------------
........................................................................................................................................................................................CGCGGCCATCCGACCCTGACCCAT.......................................... 2411.001.00----------------------------------------------------------------------------------1.00-----------------
............................................................................................................................................................................CCCATCGTCCCCGGGAC............................................................. 1711.001.00----1.00-----------------------------------------------------------------------------------------------
............................................................CTCCCGGCCGAGGGGTGTT........................................................................................................................................................................... 191.000.00-----------------------------------------------------------1.00----------------------------------------
....CGGCGGGCGGAGACGGG..................................................................................................................................................................................................................................... 171.000.00---1.00------------------------------------------------------------------------------------------------
........GGGCGGAGACGTGGGCCCG............................................................................................................................................................................................................................... 191.000.00----------------------------------------------------------------------------1.00-----------------------
.......................................................................GGGGGCGGGCGGCCCCTGA................................................................................................................................................................ 191.000.00------1.00---------------------------------------------------------------------------------------------
........CCCACGTCTCCGCCC................................................................................................................................................................................................................................... 1520.500.50--------------------------------------------------------------------------------------------0.50-------
....................................................................................................................GCGCCCGCCCGTGCG....................................................................................................................... 1520.500.50--------------0.50-------------------------------------------------------------------------------------