uc001skx.2_intron_22_0_chr12_56722143

AACAACCTCAAGTATATGGCCCGTGGGGGCCTCATTATATTTGATTACCTGTAAGTGGCTTCTCAGCTCTGGACTAGGAACGAGGATGCCTCATAGGGTGGGAAGGCTAAGGGATTGGCAGCTTGTAAGGCCTGGGCCCCTTAGCCTTTCCTCTCCCCACCAGGCTGGATGAGAATGAGGATATGCACAGTCTCCTACTGACTGACAGCAGCA
...............................................................................................(((.((((((((((((((...(((..........))).....))))))))))))))...)))........................................................
........................................................................................89........................................................................163................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)

SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)

DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)

SRR189784

SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)

SRR189785

SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)

SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)

SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)

SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)

GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)

RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)

SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)

SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)

SRR040010(GSM532895)
G529N. (cervix)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR040011(GSM532896)
G529T. (cervix)

SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)

SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR033724(GSM497069)
L428 cell line (L428). (B cell)

SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)

GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR040020(GSM532905)
G699N_2. (cervix)

SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)

SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)

SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)

SRR033731(GSM497076)
h929 Cell line (h929). (B cell)

SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)

.............................................................................................TAGGGTGGGAAGGCTAAGGGAT..................................................................................................

8.00

2.00

3.00

.............................................................................................TAGGGTGGGAAGGCTAAGGGATT.................................................................................................

6.00

3.00

1.00

.................................................................................................GTGGGAAGGCTAAGGGATTGGAATC...........................................................................................

4.00

0.00

4.00

............................................................................................ATAGGGTGGGAAGGCTAAG......................................................................................................

3.00

1.00

..................................................GTAAGTGGCTTCTCAGCTCTGGACTAGGAACGAGGATGCCTCATAGGGTGGGAAGGCTAAGGGATTGGCAGCTTGTAAGGCCTGGGCCCCTTAGC....................................................................

3.00

.................................................................................................GTGGGAAGGCTAAGGGATTGGC..............................................................................................

3.00

................................................................................................................GATTGGCAGCTTGTACCG...................................................................................

2.00

0.00

2.00

............................................................................................ATAGGGTGGGAAGGCTAAGG.....................................................................................................

2.00

1.00

..............................................................................................................GGGATTGGCAGCTTGTACCT...................................................................................

2.00

..............................................................................................................GGGATTGGCAGCTTGTA......................................................................................

2.00

..............................................................................................................GGGATTGGCAGCTTGTACCGG..................................................................................

2.00

1.00

..............................................................................................AGGGTGGGAAGGCTAAGGGAC..................................................................................................

2.00

0.00

2.00

...........................................................................................................TAAGGGATTGGCAGCTTGTAA.....................................................................................

2.00

...................................................................................................................................................................GCTGGATGAGAATGAGGATATGCACA........................

2.00

1.00

..............................................................................................AGGGTGGGAAGGCTAAGGGATT.................................................................................................

1.00

.............................................................................................TAGGGTGGGAAGGCTAAGAAA...................................................................................................

1.00

0.00

1.00

.............................................................................................TAGGGTGGGAAGGCTAAGGGAA..................................................................................................

1.00

..............................................................................................AGGGTGGGAAGGCTAAGGGAA..................................................................................................

1.00

0.00

1.00

.................................................................................................................ATTGGCAGCTTGTAACGG..................................................................................

1.00

0.00

1.00

..............................................................................................AGGGTGGGAAGGCTAAGGGAT..................................................................................................

1.00

...........................................................TTCTCAGCTCTGGACG..........................................................................................................................................

1.00

0.00

1.00

........................................................................................................................................CCCCTTAGCCTTTCCTCTCCCCA......................................................

1.00

..........AGTATATGGCCCGTGGG..........................................................................................................................................................................................

1.00

.............................................................................................TAGGGTGGGAAGGCTAAGGGAAT.................................................................................................

1.00

.............................................................................................TAGGGTGGGAAGGCTAAGG.....................................................................................................

1.00

.............................................................................................TAGGGTGGGAAGGCTAAGGGACTG................................................................................................

1.00

..............................................................................................................GGGATTGGCAGCTTGTACGG...................................................................................

1.00

2.00

1.00

............................................................................................ATAGGGTGGGAAGGCTAAGGG....................................................................................................

1.00

.............................................................................................TAGGGTGGGAAGGCTAAGGGA...................................................................................................

1.00

............................................................................................................................................TTAGCCTTTCCTCTCCCCAC.....................................................

1.00

0.00

1.00

..............................................................................................AGGGTGGGAAGGCTAAGGGT...................................................................................................

1.00

0.00

1.00

................................................................................................GGTGGGAAGGCTAAGGGAT..................................................................................................

1.00

..................................................................................................TGGGAAGGCTAAGGGATTGGA..............................................................................................

1.00

0.00

1.00

..................................................GTAAGTGGCTTCTCAGCTCTGGACTAGG.......................................................................................................................................

1.00

..............................................................................................AGGGTGGGAAGGCTAAGGGATTTTA..............................................................................................

1.00

0.50

..............................................................................................AGGGTGGGAAGGCTAAG......................................................................................................

0.50

............................................................................................................AAGGGATTGGCAGCT..........................................................................................

0.25

............................................................................................................AAGGGATTGGCAGCTGCC.......................................................................................

0.25