ID: uc001sjs.2_intron_5_0_chr12_56551330_f
GENE: (6)
chr12:56551280-56551531+


(3)
AGO2.ip 		(12)
B-CELL 		(6)
BRAIN 		(10)
BREAST 		(27)
CELL-LINE 		(12)
CERVIX 		(5)
HEART 		(3)
HELA 		(4)
LIVER 		(3)
OTHER 		(27)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(2)
XRN.ip

Sense strand
GACCGTTCTGGCAGGACACGAGGACAGCAACGGCTGCATCAACTACGAGGGTGAGGGGACAAAAAAGCGGGAGCGGGGCCGAGGGAGGAGGGCAGCCTGGCGTCTTGCCGCGTGTGGGCGGGGGCACCCCTGGATTACCTAGAGTCAGATGTATTATCCAAAGGCCTGCTTCTGAAGCCCCTCTTGCCTCCTCTCTCTGCAGCCTTCTTGAAACACATCCTAAGCGTCTGAGTGCTGCAGGTAGGGCCCTCC
..................................................................((....))...(((..........)))...............................................................................................................................................................
............................................45...............................................94.............................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040038(GSM532923)
G531N. (cervix)		TAX577740(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR040037(GSM532922)
G243T. (cervix)		SRR040039(GSM532924)
G531T. (cervix)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR040034(GSM532919)
G001N. (cervix)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR029128(GSM416757)
H520. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189784SRR040040(GSM532925)
G612N. (cervix)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040029(GSM532914)
G026T. (cervix)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR189783DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR038854(GSM458537)
MM653. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR040035(GSM532920)
G001T. (cervix)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR040032(GSM532917)
G603N. (cervix)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR040015(GSM532900)
G623T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM532889(GSM532889)
G576N. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532887(GSM532887)
G761N. (cervix)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		TAX577739(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
........................................................................GCGGGGCCGAGGGAGCGA..................................................................................................................................................................1819.000.00-4.00---4.00-2.00---1.001.00-1.00-1.00-1.00--------------------1.00---1.00-----1.00-----------------------------1.00---------------------------------
........................................................................GCGGGGCCGAGGGAGCGAG.................................................................................................................................................................1910.000.00-5.00-----1.00---2.002.00----------------------------------------------------------------------------------------------------
..................................................GTGAGGGGACAAAAAAAAA.......................................................................................................................................................................................1934.001.67----0.33---------------------------1.331.00------------------------------------------------0.33--------0.33----0.33-0.33--------------
.......................................................................................................................................................................................................................CATCCTAAGCGTCTGAGTGC.................2013.003.003.00----------------------------------------------------------------------------------------------------------------
........................................................................GCGGGGCCGAGGGAGCG...................................................................................................................................................................173.000.00-----------------1.00------------------1.00-------------------------------------------1.00--------------------------------
..........GCAGGACACGAGGACAGCA...............................................................................................................................................................................................................................1913.003.00--------------------2.00--------------------------------------------------------1.00-----------------------------------
..................................................GTGAGGGGACAAAAAAAAAA......................................................................................................................................................................................2032.331.67---------------------------------0.33------------------------------------------------0.33-------0.33-0.33-0.330.33-0.33---------------
.........GGCAGGACACGAGGACAGCAACG............................................................................................................................................................................................................................2312.002.00--------------2.00--------------------------------------------------------------------------------------------------
...........CAGGACACGAGGACAGCAACGGCTGCA......................................................................................................................................................................................................................2712.002.00----------1.00-----------------1.00------------------------------------------------------------------------------------
.............................................................................................................................................................................................................TCTTGAAACACATCCTAAGCGTCTGA.....................2612.002.00------------------------1.00---------------1.00------------------------------------------------------------------------
.......CTGGCAGGACACGAGGACA..................................................................................................................................................................................................................................1912.002.00-------------1.00--------------1.00------------------------------------------------------------------------------------
............AGGACACGAGGACAGCAACGG...........................................................................................................................................................................................................................2112.002.00--------------------------1.00-----------1.00--------------------------------------------------------------------------
.....TTCTGGCAGGACACGAGGACAGCAACGGCT.........................................................................................................................................................................................................................3012.002.00---------2.00-------------------------------------------------------------------------------------------------------
............AGGACACGAGGACAGCAACGGCTGCATC....................................................................................................................................................................................................................2812.002.00---------1.00--------------1.00----------------------------------------------------------------------------------------
............AGGACACGAGGACAGCAACGGCT.........................................................................................................................................................................................................................2312.002.00--1.00-------1.00------------------------------------------------------------------------------------------------------
..................................................GTGAGGGGACAAAAAA..........................................................................................................................................................................................1631.671.67-------0.33--------------------------0.33---------------------------------------------------0.33--0.33---0.33-------------------
....GTTCTGGCAGGACACGAGGACAGC................................................................................................................................................................................................................................2411.001.00-------------------------1.00---------------------------------------------------------------------------------------
....GTTCTGGCAGGACACGAGGACAGCAACGGCTGGA......................................................................................................................................................................................................................341.000.00------1.00----------------------------------------------------------------------------------------------------------
............AGGACACGAGGACAGCAAC.............................................................................................................................................................................................................................1911.001.00----------1.00------------------------------------------------------------------------------------------------------
.........................................................................CGGGGCCGAGGGAGGAGAC................................................................................................................................................................191.000.00------------------------------------------------------------------1.00----------------------------------------------
..........................................................................................................GCCGCGTGTGGGCGGCG.................................................................................................................................171.000.00----------------------------------1.00------------------------------------------------------------------------------
......................................................................................................................................................................................................................ACATCCTAAGCGTCTGAG....................1811.001.00--------------------------------------------------------------------1.00--------------------------------------------
.................................................GGTGAGGGGACAAAAAAAAAA......................................................................................................................................................................................211.000.00------------------------------------------------------------1.00----------------------------------------------------
.........GGCAGGACACGAGGACAGCAA..............................................................................................................................................................................................................................2111.001.00------------------------------------------------------------------------------1.00----------------------------------
...................GAGGACAGCAACGGCTGCATCAA..................................................................................................................................................................................................................2311.001.00---------------1.00-------------------------------------------------------------------------------------------------
..........................................................................GGGGCCGAGGGAGGAGACCC..............................................................................................................................................................201.000.00-----------------------------------1.00-----------------------------------------------------------------------------
.................................................................................................................................................................................................................................GTCTGAGTGCTGCAGATC.........181.000.00---------------------------------------------------------------------------1.00-------------------------------------
............................................................................................................................................................................................................................TAAGCGTCTGAGTGCTGCAGGTAG........2411.001.00----1.00------------------------------------------------------------------------------------------------------------
........TGGCAGGACACGAGGACAGCAACGGCTGGA......................................................................................................................................................................................................................301.000.00-------------------------1.00---------------------------------------------------------------------------------------
............................................................................................................................................................................................................................TAAGCGTCTGAGTGCTGCAGATC.........231.000.00----1.00------------------------------------------------------------------------------------------------------------
............AGGACACGAGGACAGCAACGGCTGCA......................................................................................................................................................................................................................2611.001.00------------------------------------------------------------------------1.00----------------------------------------
.....TTCTGGCAGGACACGAGGACAGCAACGGC..........................................................................................................................................................................................................................2911.001.00-------------------------------------------------------1.00---------------------------------------------------------
...........................................................................GGGCCGAGGGAGGAGACCC..............................................................................................................................................................191.000.00-------------------------------------------------------------------------1.00---------------------------------------
.........................................................................CGGGGCCGAGGGAGGACC.................................................................................................................................................................1821.000.50----------------------------------------------------------1.00------------------------------------------------------
...........................CAACGGCTGCATCAACTA...............................................................................................................................................................................................................1811.001.00-------------1.00---------------------------------------------------------------------------------------------------
.........GGCAGGACACGAGGACAGCAACGGCTGCC......................................................................................................................................................................................................................291.000.00--1.00--------------------------------------------------------------------------------------------------------------
...........................................................................GGGCCGAGGGAGGAGGCCCG.............................................................................................................................................................201.000.00-----------------1.00-----------------------------------------------------------------------------------------------
....................................................................GGGAGCGGGGCCGAGGGG......................................................................................................................................................................181.000.00---------------------------------------------------1.00-------------------------------------------------------------
.......CTGGCAGGACACGAGGCCA..................................................................................................................................................................................................................................191.000.00-------------1.00---------------------------------------------------------------------------------------------------
....................................................................GGGAGCGGGGCCGAGGGGT.....................................................................................................................................................................191.000.00----------------------------------------------------------------------1.00------------------------------------------
.............................................................................................................................................................................................................................AAGCGTCTGAGTGCTGCTG............191.000.00------------------------------------------1.00----------------------------------------------------------------------
....................AGGACAGCAACGGCTGCAT.....................................................................................................................................................................................................................1911.001.00--------------------------------------------------------------------------1.00--------------------------------------
....GTTCTGGCAGGACACGAGGACAGCA...............................................................................................................................................................................................................................2511.001.00----------------------1.00------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................ACACATCCTAAGCGTCTGAGTG..................2211.001.00----------------------1.00------------------------------------------------------------------------------------------
..................................................................................................................................................AGATGTATTATCCAAAGGC.......................................................................................1911.001.00---------------------------------------------------------------------------------1.00-------------------------------
............AGGACACGAGGACAGCAACGGAA.........................................................................................................................................................................................................................2311.002.00--1.00--------------------------------------------------------------------------------------------------------------
......TCTGGCAGGACACGAGGA....................................................................................................................................................................................................................................1811.001.00---------------------1.00-------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................AACACATCCTAAGCGTCTGAGTGCTGCAG............2911.001.00----1.00------------------------------------------------------------------------------------------------------------
...................................................TGAGGGGACAAAAAAGAA.......................................................................................................................................................................................181.000.00------------------------------------------------------1.00----------------------------------------------------------
.........................................................................CGGGGCCGAGGGAGGAGG.................................................................................................................................................................1811.001.00-------------------------------------1.00---------------------------------------------------------------------------
............AGGACACGAGGACAGCAACGGCTGC.......................................................................................................................................................................................................................2511.001.00-----------------------------------------------1.00-----------------------------------------------------------------
.............................................................................................................................................................................................................................AAGCGTCTGAGTGCTGCAG............1911.001.00----------------------------------------------------------------------------1.00------------------------------------
....................AGGACAGCAACGGCTGCATC....................................................................................................................................................................................................................2011.001.00---------------1.00-------------------------------------------------------------------------------------------------
...CGTTCTGGCAGGACACGAGGACAGC................................................................................................................................................................................................................................2511.001.00----1.00------------------------------------------------------------------------------------------------------------
...........CAGGACACGAGGACAGCAACGGCCG........................................................................................................................................................................................................................251.000.00-----------------------1.00-----------------------------------------------------------------------------------------
...............................................AGGGTGAGGGGACAAATGTT.........................................................................................................................................................................................201.000.00-------------------------------------------------------------1.00---------------------------------------------------
........................................................................GCGGGGCCGAGGGAGCGGG.................................................................................................................................................................191.000.00------------------1.00----------------------------------------------------------------------------------------------
...........CAGGACACGAGGACAGCAACGG...........................................................................................................................................................................................................................2211.001.00------1.00----------------------------------------------------------------------------------------------------------
.........GGCAGGACACGAGGACAGCAACGGCTCG.......................................................................................................................................................................................................................281.000.00-----------------------------1.00-----------------------------------------------------------------------------------
................................................................................................................................CCTGGATTACCTAGAGTCAGATGTATTATCCA............................................................................................3211.001.00-----------------------------------------------------------1.00-----------------------------------------------------
........................................................................GCGGGGCCGAGGGAGCGT..................................................................................................................................................................181.000.00-1.00---------------------------------------------------------------------------------------------------------------
............AGGACACGAGGACAGCAACGGCGGCA......................................................................................................................................................................................................................261.000.00--------------------------1.00--------------------------------------------------------------------------------------
............................................................................................................................................................................................................................TAAGCGTCTGAGTGCTGCAAATC.........231.000.00-----------------------------------------------------1.00-----------------------------------------------------------
...........CAGGACACGAGGACAGC................................................................................................................................................................................................................................1711.001.00------------------------------------------------1.00----------------------------------------------------------------
.......CTGGCAGGACACGAGGACAGCA...............................................................................................................................................................................................................................2211.001.00-----------------------------------------------------------------------1.00-----------------------------------------
..........GCAGGACACGAGGACAGC................................................................................................................................................................................................................................1811.001.00---------------------------------------------------------------1.00-------------------------------------------------
...................GAGGACAGCAACGGCTGCGTC....................................................................................................................................................................................................................211.000.00-----------------------------------------------------------------1.00-----------------------------------------------
.....TTCTGGCAGGACACGAGGAC...................................................................................................................................................................................................................................2011.001.00--------------------------------------------1.00--------------------------------------------------------------------
......TCTGGCAGGACACGAGGACAGCAA..............................................................................................................................................................................................................................2411.001.00--------------------------------------------------------------1.00--------------------------------------------------
............AGGACACGAGGACAGCAC..............................................................................................................................................................................................................................181.000.00------1.00----------------------------------------------------------------------------------------------------------
....GTTCTGGCAGGACACGAGGACAGCAACGGCTGC.......................................................................................................................................................................................................................3311.001.00---------------------------1.00-------------------------------------------------------------------------------------
.........................................................................CGGGGCCGAGGGAGG....................................................................................................................................................................1580.750.75----------------0.12-------------------0.120.12-----------------------------------------------0.12---------------0.12-0.12---------
.........................................................................CGGGGCCGAGGGAGGGGGA................................................................................................................................................................1980.750.75---------------------------------------------------------------------------------------0.380.38------------------------
.........................................................................CGGGGCCGAGGGAGGA...................................................................................................................................................................1620.500.50-----------------------------------------------------------------------------------0.50-----------------------------
....................AGGACAGCAACGGCTGCA......................................................................................................................................................................................................................1820.500.50---------------0.50-------------------------------------------------------------------------------------------------
.........................................................................CGGGGCCGAGGGAGGGAGA................................................................................................................................................................1980.380.75-----------------0.12--------------------------------------------------------------------------------------0.12-0.12------
.......................................................................AGCGGGGCCGAGGGAG.....................................................................................................................................................................1630.330.33-------------------------------------------------------------------------------------0.33---------------------------
.............................................................................................................GCGTGTGGGCGGGGG................................................................................................................................1540.250.25---------------------------------------------------------------------------------------------------0.25-------------
....................................................................GGGAGCGGGGCCGAG.........................................................................................................................................................................1590.220.22-----------------------------------------------------------------------------------------------------------0.11---0.11-
....................................................................GGGAGCGGGGCCGAGTGG......................................................................................................................................................................1890.220.22-----0.11---------------------------------0.11-------------------------------------------------------------------------
.........................................................................CGGGGCCGAGGGAGGGAGG................................................................................................................................................................1980.120.75--------------------------------------0.12--------------------------------------------------------------------------
.......................................................................AGCGGGGCCGAGGGA......................................................................................................................................................................1580.120.12--------------------------------------------------------------------------------------0.12--------------------------
.........................................................................CGGGGCCGAGGGAGGGCC.................................................................................................................................................................1880.120.75------------------------------------------------------------------------------------------------------0.12----------
.........................................................................CGGGGCCGAGGGAGGCGC.................................................................................................................................................................1880.120.75---------------------------------------------------------------------------------------------------------0.12-------
...........................................................................................................................................................................................CTCCTCTCTCTGCAGCC................................................1790.110.11----------------------------------------------------------------------------------------------------------------0.11
....................................................................GGGAGCGGGGCCGAGTGGT.....................................................................................................................................................................1990.110.22------------------------------------------------------------------------------------------------------------0.11----
....................................................................GGGAGCGGGGCCGAGTCG......................................................................................................................................................................1890.110.22-------------------------------------------------------------------------------------------------------------0.11---
....................................................................GGGAGCGGGGCCGAGT........................................................................................................................................................................1690.110.22--------------------------------------------------------------------------------------------------------------0.11--

Antisense strand
GACCGTTCTGGCAGGACACGAGGACAGCAACGGCTGCATCAACTACGAGGGTGAGGGGACAAAAAAGCGGGAGCGGGGCCGAGGGAGGAGGGCAGCCTGGCGTCTTGCCGCGTGTGGGCGGGGGCACCCCTGGATTACCTAGAGTCAGATGTATTATCCAAAGGCCTGCTTCTGAAGCCCCTCTTGCCTCCTCTCTCTGCAGCCTTCTTGAAACACATCCTAAGCGTCTGAGTGCTGCAGGTAGGGCCCTCC
..................................................................((....))...(((..........)))...............................................................................................................................................................
............................................45...............................................94.............................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040038(GSM532923)
G531N. (cervix)		TAX577740(Rovira)
total RNA. (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR040037(GSM532922)
G243T. (cervix)		SRR040039(GSM532924)
G531T. (cervix)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR040034(GSM532919)
G001N. (cervix)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR029128(GSM416757)
H520. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189784SRR040040(GSM532925)
G612N. (cervix)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040029(GSM532914)
G026T. (cervix)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR189783DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR038854(GSM458537)
MM653. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR040035(GSM532920)
G001T. (cervix)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR040032(GSM532917)
G603N. (cervix)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR040015(GSM532900)
G623T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM532889(GSM532889)
G576N. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532887(GSM532887)
G761N. (cervix)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		TAX577739(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
........................................................................................................................................ATAATACATCTGACTCTAGGT............................................................................................... 2119.009.009.00----------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TAGGATGTGTTTCAAGAAGGC.............................. 2112.002.002.00----------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CTTAGGATGTGTTTCAAGAAGG............................ 2212.002.00--2.00--------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................TAGGATGTGTTTCAAGAAGGCTG.............................. 2312.002.002.00----------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTCAAGAAGGCTGCAGAGAG........................................ 2012.002.00---1.00--------------------------1.00----------------------------------------------------------------------------------
........................................................................................................................................TTGGATAATACATCTGACTCTAGGT........................................................................................... 2512.002.00-------------------2.00---------------------------------------------------------------------------------------------
...........................................................................................................................................................................................AAGGCTGCAGAGAGAGGAG.............................................. 1912.002.00---2.00-------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................GCTTAGGATGTGTTTCAAGA........................... 2012.002.002.00----------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................AGGATGTGTTTCAAGAAGGC............................... 2012.002.002.00----------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................AAGGCTGCAGAGAGAGGAGG.............................................. 2012.002.00--2.00--------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................TTCTTGAAACACATCCTTGC............................ 201.000.001.00----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................ACTCAGACGCTTAGGATGTGTTTCAAGAAGGCTG................... 3411.001.00-----------------------------------------1.00-----------------------------------------------------------------------
..............................................................................................................................................................................................CAAGAAGGCTGCAGAGAGAG.......................................... 2021.001.00--------1.00--------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................AAGGCTGCAGAGAGAGGA.............................................. 1821.001.00---0.50--------------------------0.50----------------------------------------------------------------------------------
...........................................................................................................................................................................................................ACGCTTAGGATGTGTTTCAAGAAG......................... 2411.001.00--------------------------------------------------------1.00--------------------------------------------------------
.......................................................................................................................................................................................................CGCTTAGGATGTGTTTCAAGAAGGCTG.......................... 2711.001.00-------------------------------------------------------------------1.00---------------------------------------------
.......................................................................................................................................................................................TCAAGAAGGCTGCAGAGAGAGGAGGCAA......................................... 2811.001.00---------------------------1.00-------------------------------------------------------------------------------------
..................................................................................................................................................................................................TGTTTCAAGAAGGCTGCAGAG..................................... 2111.001.00---1.00-------------------------------------------------------------------------------------------------------------
................................................................................................................................................................AAGGCCTGCTTCTGAAGCCCCTCTCGG................................................................. 271.000.00-----------------------1.00-----------------------------------------------------------------------------------------
..........................................................................................................................................................GCTTCAGAAGCAGGCCTTTGGATA.......................................................................... 2411.001.00---------------------1.00-------------------------------------------------------------------------------------------
...............................................................................................................................CATCTGACTCTAGGTAATCCAGGG..................................................................................................... 2411.001.00----------------------------------------------------1.00------------------------------------------------------------
..........................................................................................................................CTAGGTAATCCAGGGGTGCC.............................................................................................................. 2011.001.00--------------------------------------------------1.00--------------------------------------------------------------
..........................................................................................................................................................................................AGGCTGCAGAGAGAGGAGG............................................... 1911.001.00-------------------------------1.00---------------------------------------------------------------------------------
........................................................................................................................................................................................................AGGATGTGTTTCAAGAAGGCT............................... 2111.001.00---------------------------------------------1.00-------------------------------------------------------------------
..................................................................................................................................................................................................GTTTCAAGAAGGCTGCAGAG...................................... 2011.001.00--------1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GCAGCACTCAGACGCTTAGGATGTG.............. 2511.001.00---------------------------------------------------------1.00-------------------------------------------------------
..........................................................................................................................................................................................................TAGGATGTGTTTCAAGAAGG.............................. 2011.001.00---------------------------------------------------------------------1.00-------------------------------------------
...........................CACCCTCGTAGTTGATGCAGCCGTTG....................................................................................................................................................................................................... 2611.001.00----------------1.00------------------------------------------------------------------------------------------------
...............................................................................................................................................................................AGCCCCTCTTGCCTCCTCTCTCTGCAGCCTCC............................................. 321.000.00----------------------------------------------------------------1.00------------------------------------------------
.........................................................................................................................................................................................................................ACCTGCAGCACTCAGACGCTTAGGA.......... 2511.001.00----------------------------------------------1.00------------------------------------------------------------------
.............................................................................................................................................................................................CAAGAAGGCTGCAGAGAGAGG.......................................... 2120.500.50-------------------------------0.50---------------------------------------------------------------------------------
.............................................................................................................................................................................................AAGAAGGCTGCAGAGAGAGG........................................... 2020.500.50-----------------------------0.50-----------------------------------------------------------------------------------
...............................................................................................................................................................................................AAGAAGGCTGCAGAGAGA........................................... 1820.500.50------------------------------------------------------------------------------------0.50----------------------------
................................................................................................................................................................................................CAAGAAGGCTGCAGAGAG.......................................... 1820.500.50---0.50-------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................AAGAAGGCTGCAGAGAG........................................... 1720.500.50------0.50----------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................TTCAAGAAGGCTGCAGAGA........................................ 1920.500.50------0.50----------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................CAAGAAGGCTGCAGAGAGA.......................................... 1920.500.50--------0.50--------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................TTCAAGAAGGCTGCAGAG........................................ 1830.330.33--------0.33--------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................AAGGCTGCAGAGAGAGG.............................................. 1740.250.25--------0.25--------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CAGAGAGAGGAGGCAAGA..................................................... 1850.200.20----------------------------------------------------------------------------------------------------0.20------------
.........................................................................................................................................................................................CTGCAGAGAGAGGAGGC.................................................. 1770.140.14-----------------------------------0.14-----------------------------------------------------------------------------