ID: uc001sga.2_intron_23_0_chr12_54802020_r.5p
GENE: (6)
chr12:54802340-54802589-


(1)
AGO2.ip 		(2)
B-CELL 		(1)
BRAIN 		(15)
CELL-LINE 		(3)
CERVIX 		(1)
HELA 		(2)
LIVER 		(2)
OTHER 		(4)
SKIN

Sense strand
ACAGACTGGCCGTGTGGTTTTAGGTGGACCAGGAAGCTATTTCTGGCAAGGTAAGTCCTGTCTCTGCCATTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGAAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCACAACCTCTGCTGCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCCTGCCACCGCGCCTGGCTAATTTTTGTAATTTTAGTAGAGA
...............................................................................................((((((...))))))...........((((.((((.((((.((.....)).)))).((..........))....)))).))))........................................................................
..............................................................63...................................................................................................................180....................................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR189782GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR390723(GSM850202)
total small RNA. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR189786SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR040035(GSM532920)
G001T. (cervix)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTGGTT......................................................................................................................................................3281.000.00-70.00---10.00------------------1.00-----
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTATG.........................................................................................................................................................3022.000.0014.00-5.002.001.00-------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTATG.......................................................................................................................................................3118.000.008.00-6.00-4.00-------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTATG.......................................................................................................................................................3216.000.009.00-5.001.001.00-------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTAAAG........................................................................................................................................................3116.000.006.00-4.002.004.00-------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTAGG.............................................................................................................................................................269.000.003.00-6.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTAAT........................................................................................................................................................317.000.003.00-3.00-1.00-------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTCAAG.......................................................................................................................................................317.000.00-1.001.003.00--2.00-----------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTTAAG..........................................................................................................................................................306.000.002.00-3.001.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTATTT............................................................................................................................................................275.000.002.00-1.00-1.00-1.00-----------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTCCAG.......................................................................................................................................................315.000.001.00-1.001.001.00-1.00-----------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTATT.......................................................................................................................................................325.000.003.00-1.001.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTCCG.............................................................................................................................................................264.000.001.00-1.001.001.00-------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTGGTTT.....................................................................................................................................................334.000.00-4.00----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTCAG........................................................................................................................................................314.000.00--3.00-1.00-------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTAGG.......................................................................................................................................................314.000.002.00-2.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTAT........................................................................................................................................................314.000.003.00-1.00---------------------------
................GTTTTAGGTGGACCAGG.........................................................................................................................................................................................................................1714.004.00--------4.00---------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTATA.............................................................................................................................................................264.000.002.00-1.001.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTCCC.........................................................................................................................................................303.000.001.00-2.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTCCG..................................................................................................................................................................213.000.00--1.002.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTATTT........................................................................................................................................................313.000.001.00-2.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTATAG........................................................................................................................................................313.000.002.00--1.00--------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTGGGTT.....................................................................................................................................................333.000.00-3.00----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTCCG.......................................................................................................................................................323.000.00--1.002.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTCGG.........................................................................................................................................................303.000.002.00-1.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTCGG..................................................................................................................................................................213.000.002.00--1.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTATTG......................................................................................................................................................333.000.003.00-----------------------------
..........................................................................................................................................................CAGGTTCAAGCGATTCTCCGTT..........................................................................223.000.00----------3.00-------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTCATG.............................................................................................................................................................263.000.00---1.001.00-1.00-----------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTAATT........................................................................................................................................................313.000.002.00-1.00---------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTCTAG.......................................................................................................................................................313.000.001.00--1.00-1.00------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTATTG........................................................................................................................................................313.000.00--1.002.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTCTTG...........................................................................................................................................................283.000.00---3.00--------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTTTCAG.........................................................................................................................................................312.000.001.00--1.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTCGG.............................................................................................................................................................262.000.00---1.001.00-------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTACG.......................................................................................................................................................312.000.00--1.001.00--------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTATCT......................................................................................................................................................322.000.001.00-1.00---------------------------
......................................................................................................AAGTCTCACTCTGTCACCCAGGCTGCGC........................................................................................................................282.000.00-----2.00------------------------
......................................................................................................AAGTCTCACTCTGTCACCCAGGTCGG..........................................................................................................................262.000.00-1.00---1.00------------------------
...................................................................................................................................................................................................GGGATTACAGGCGCCTGATCA..................................212.000.00-------------------1.00-------1.00--
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTAGG..........................................................................................................................................................292.000.00--2.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTCTGG...........................................................................................................................................................282.000.00-1.00-1.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTACTG.........................................................................................................................................................302.000.001.00--1.00--------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTCTG............................................................................................................................................................282.000.002.00-----------------------------
...........................................................................................................................................................AGGTTCAAGCGATTCTCCTGCCACCC.....................................................................262.000.00-----2.00------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTATTT......................................................................................................................................................332.000.001.00-----1.00-----------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTCCGG.......................................................................................................................................................312.000.00-2.00----------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTGGGT......................................................................................................................................................322.000.00-2.00----------------------------
.......................................................................................................................CCAGGCTGGAGTGCAGTGGCACAACCCCG......................................................................................................292.000.00-1.00----1.00-----------------------
.....................................................................................................................ACCCAGGCTGGAGTGCAGTGGCACAACCCTGC.....................................................................................................322.000.00-2.00----------------------------
..................................................................CCATTCTTTTTTTTTTTTCG....................................................................................................................................................................202.000.00----2.00-------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTCTTG..........................................................................................................................................................302.000.00---2.00--------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTCAGG.......................................................................................................................................................312.000.00-1.00---1.00------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTATTT.......................................................................................................................................................322.000.001.00-1.00---------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTATAT......................................................................................................................................................322.000.00----1.00-1.00-----------------------
..................................................................CCATTCTTTTTTTTTTTAAAG...................................................................................................................................................................212.000.001.00-1.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTCACC........................................................................................................................................................312.000.00-1.001.00---------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTTTTTAAG.......................................................................................................................................................332.000.00---2.00--------------------------
.................................................................................................................................................................AAGCGATTCTCCTGCCTCAGCCTGGCT..............................................................272.000.00-2.00----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTAAGG.........................................................................................................................................................302.000.00---1.001.00-------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTCTCG...........................................................................................................................................................282.000.00---1.001.00-------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTCGG..............................................................................................................................................................252.000.00--1.001.00--------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTATAG......................................................................................................................................................322.000.001.00--1.00--------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTCCC........................................................................................................................................................302.000.00-1.001.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTCGG............................................................................................................................................................272.000.001.00-1.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTCTAG.......................................................................................................................................................322.000.00--1.001.00--------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTATCG......................................................................................................................................................322.000.002.00-----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTAAAA.......................................................................................................................................................322.000.001.00-1.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTAGG.........................................................................................................................................................302.000.001.00-1.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTCTTG.......................................................................................................................................................322.000.001.00--1.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTCTA............................................................................................................................................................272.000.001.00-1.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTATAT............................................................................................................................................................272.000.002.00-----------------------------
..................................................................CCATTCTTTTTTTTTTTTTCTTG.................................................................................................................................................................232.000.001.00---1.00-------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTCCTT...........................................................................................................................................................282.000.001.00---1.00-------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTCAAG............................................................................................................................................................282.000.00----2.00-------------------------
......................................................................................................AAGTCTCACTCTGTCACCCAGCTGG...........................................................................................................................252.000.00-2.00----------------------------
.........................................................................................................................................................................................................ACAGGCGCCTGCCACCGCGGCCG..........................232.000.00-2.00----------------------------
.........................................................................................................................AGGCTGGAGTGCAGTGGCACAACCCCG......................................................................................................272.000.00------2.00-----------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTCGT.............................................................................................................................................................261.000.00---1.00--------------------------
.....................................................................TTCTTTTTTTTTTTTTTTTTTTTTTTTGAAAAA....................................................................................................................................................331.000.00-1.00----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTATAT........................................................................................................................................................311.000.00---1.00--------------------------
.............................................................................................................................................AACCTCTGCTGCCCAGGTTCAAGCGAG..................................................................................271.000.00-1.00----------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTAAA............................................................................................................................................................281.000.001.00-----------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTGGCTT.....................................................................................................................................................331.000.00-1.00----------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTGAGGGTG...................................................................................................................................................351.000.00----1.00-------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTATAG............................................................................................................................................................271.000.00---1.00--------------------------
.........................................................................................................................................................................................................ACAGGCGCCTGCCACCGCGACC...........................221.000.00-----1.00------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTCTA........................................................................................................................................................301.000.00----1.00-------------------------
................................................................TGCCATTCTTTTTTTTTTTACAG...................................................................................................................................................................231.000.00---1.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTCCC........................................................................................................................................................311.000.00---1.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTAAAT.......................................................................................................................................................321.000.001.00-----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTGTCTT.....................................................................................................................................................341.000.001.00-----------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTATTT......................................................................................................................................................321.000.00---1.00--------------------------
.....................................................................................................................................................CTGCCCAGGTTCAAGCGATTCCGAC............................................................................251.000.00-----1.00------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTACTG...........................................................................................................................................................291.000.00---1.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTCCAG.......................................................................................................................................................321.000.00---1.00--------------------------
......................................................................................................AAGTCTCACTCTGTCTGAA.................................................................................................................................191.000.00-------------------------1.00----
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTTTTTGCTT......................................................................................................................................................341.000.001.00-----------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTTTCAT.........................................................................................................................................................311.000.00--1.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTCTTC......................................................................................................................................................331.000.001.00-----------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTAACA..........................................................................................................................................................301.000.00-1.00----------------------------
...........................................................................................................................................................AGGTTCAAGCGATTCTCCTGCACC.......................................................................241.000.00-----1.00------------------------
............TGTGGTTTTAGGTGGAATAG..........................................................................................................................................................................................................................201.000.00------------------1.00-----------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTTTTTCCGA......................................................................................................................................................341.000.001.00-----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTCTCG.......................................................................................................................................................321.000.00--1.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTGGGG......................................................................................................................................................331.000.00-1.00----------------------------
.........................................................................................................................AGGCTGGAGTGCAGTGGCACAACTCC.......................................................................................................261.000.00-1.00----------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTCTG..............................................................................................................................................................261.000.00---1.00--------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTCCTC.......................................................................................................................................................311.000.00-1.00----------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTTTTTGGTG......................................................................................................................................................341.000.001.00-----------------------------
................................................................TGCCATTCTTTTTTTTTTTTTCGAG.................................................................................................................................................................251.000.00-1.00----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTCATT............................................................................................................................................................271.000.001.00-----------------------------
.........................................................................................................................................................................................................ACAGGCGCCTGCCACCGCGCCTGAC........................251.000.00-1.00----------------------------
.........................................................................................................................AGGCTGGAGTGCAGTGGCACAACCAACC.....................................................................................................281.000.00------1.00-----------------------
.................................................................GCCATTCTTTTTTTTTTTTTTTTTTTTTAG...........................................................................................................................................................301.000.00------1.00-----------------------
...................................................................CATTCTTTTTTTTTTTTTCCAT.................................................................................................................................................................221.000.00----1.00-------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTATCA......................................................................................................................................................321.000.001.00-----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTAACT.........................................................................................................................................................301.000.001.00-----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTCATG............................................................................................................................................................271.000.00---1.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTCCCG............................................................................................................................................................271.000.00--1.00---------------------------
..................................................................CCATTCTTTTTTTTTTTAAG....................................................................................................................................................................201.000.00--1.00---------------------------
......................................................................TCTTTTTTTTTTTTTTTTTTTTTTTTGAGCGGG...................................................................................................................................................331.000.00-----1.00------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTAACA......................................................................................................................................................331.000.001.00-----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTCAT.............................................................................................................................................................261.000.00----1.00-------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTGTTGG.....................................................................................................................................................341.000.00----1.00-------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTCCAG...........................................................................................................................................................281.000.001.00-----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTCAAG.......................................................................................................................................................321.000.00---1.00--------------------------
....ACTGGCCGTGTGGTTGCG....................................................................................................................................................................................................................................181.000.00-----------------1.00------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTTTTTAAAG......................................................................................................................................................341.000.001.00-----------------------------
.................TTTTAGGTGGACCAGGAAGC.....................................................................................................................................................................................................................2011.001.00----------------1.00-------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTCTC...........................................................................................................................................................291.000.001.00-----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTGGTGT.....................................................................................................................................................341.000.001.00-----------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTAT..............................................................................................................................................................261.000.001.00-----------------------------
..............................................................................................................................................................................................TAGCTGGGATTACAGGCGCCTTCG....................................241.000.00-----1.00------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTGGG...........................................................................................................................................................291.000.001.00-----------------------------
..............................................................................TTTTTTTTTTTTTTTTTTGAGACGAAGGG...............................................................................................................................................291.000.00-1.00----------------------------
..................................................................CCATTCTTTTTTTTTTAAG.....................................................................................................................................................................191.000.00----1.00-------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTTTTTGTGG......................................................................................................................................................341.000.001.00-----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTCCAT...........................................................................................................................................................281.000.001.00-----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTAAAA.........................................................................................................................................................301.000.00---1.00--------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTAGTT......................................................................................................................................................321.000.00-----1.00------------------------
...................................................................CATTCTTTTTTTTTTTTTACG..................................................................................................................................................................211.000.001.00-----------------------------
.................................................................................................AGACGAAGTCTCACTCTGGGGC...................................................................................................................................221.000.00-1.00----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTGTTG......................................................................................................................................................331.000.00---1.00--------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTGGTC......................................................................................................................................................321.000.00-1.00----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTCTAG............................................................................................................................................................271.000.00---1.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTACAG............................................................................................................................................................271.000.001.00-----------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTCAAA.............................................................................................................................................................271.000.00--1.00---------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTTTAAT.........................................................................................................................................................311.000.001.00-----------------------------
......................................................................................................AAGTCTCACTCTGTCACCCAGGCTGGAGCGCC....................................................................................................................321.000.00-1.00----------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTCGAT.......................................................................................................................................................311.000.00-----1.00------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTCTA..............................................................................................................................................................251.000.00--1.00---------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTCTTT..........................................................................................................................................................301.000.001.00-----------------------------
................................................................TGCCATTCTTTTTTTTTTTTTCAA..................................................................................................................................................................241.000.00-----------1.00------------------
...................................................................................................................TCACCCAGGCTGGAGTGCAGTGGCACAACCCCG......................................................................................................331.000.00----1.00-------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTATT............................................................................................................................................................281.000.001.00-----------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTAT............................................................................................................................................................281.000.00---1.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTCTA.........................................................................................................................................................301.000.00---1.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTAAGG........................................................................................................................................................311.000.001.00-----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTCCGG.............................................................................................................................................................261.000.00---1.00--------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTAT.............................................................................................................................................................271.000.001.00-----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTAGTG.......................................................................................................................................................321.000.00--1.00---------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTATTG...........................................................................................................................................................291.000.00--1.00---------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTAACA......................................................................................................................................................321.000.001.00-----------------------------
...................................................................CATTCTTTTTTTTTTTTTAGG..................................................................................................................................................................211.000.001.00-----------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTGGCT......................................................................................................................................................321.000.00-1.00----------------------------
..................................................................................................................................................................AGCGATTCTCCTGCCTCAGCCTGGTG..............................................................261.000.00-1.00----------------------------
.......................................................................CTTTTTTTTTTTTTTTTTTTTTTTTGAGCGC....................................................................................................................................................311.000.00-1.00----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTCTCG.............................................................................................................................................................261.000.00----1.00-------------------------
...................................................................CATTCTTTTTTTTTTTTTCTCG.................................................................................................................................................................221.000.00---1.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTAAAC......................................................................................................................................................331.000.00------1.00-----------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTGTTGT.....................................................................................................................................................341.000.001.00-----------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTTTTTGTTTT.....................................................................................................................................................351.000.001.00-----------------------------
.........................................................................................................................................................................................................ACAGGCGCCTGCCACCGCGCCTGGCTG......................271.000.00-1.00----------------------------
.....................................................................TTCTTTTTTTTTTTTTTTTTTTTTTTTGAGAAAAG..................................................................................................................................................351.000.00--1.00---------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTAACT......................................................................................................................................................321.000.001.00-----------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTAACA...........................................................................................................................................................291.000.00--1.00---------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTTATG..........................................................................................................................................................301.000.001.00-----------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTACTT......................................................................................................................................................321.000.00----1.00-------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTAACC.......................................................................................................................................................321.000.00-1.00----------------------------
................................................................TGCCATTCTTTTTTTTTTTTTTTTTCGA..............................................................................................................................................................281.000.00-1.00----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTGGG.......................................................................................................................................................321.000.00--1.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTAAGG............................................................................................................................................................271.000.00--1.00---------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTAGTG......................................................................................................................................................321.000.00-1.00----------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTCAAG...............................................................................................................................................................251.000.00----1.00-------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTTTCTAG........................................................................................................................................................321.000.00----1.00-------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTATG............................................................................................................................................................281.000.00---1.00--------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTCTCG.............................................................................................................................................................271.000.00---1.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTGGCT......................................................................................................................................................331.000.00-1.00----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTAAAC.......................................................................................................................................................321.000.00----1.00-------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTACCT......................................................................................................................................................331.000.00--1.00---------------------------
..................................................................CCATTCTTTTTTTTTTTTTTCCAG................................................................................................................................................................241.000.00---1.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTATAG.................................................................................................................................................................221.000.001.00-----------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTCTCG.......................................................................................................................................................311.000.00----1.00-------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTCCCC.......................................................................................................................................................311.000.00-1.00----------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTATA.......................................................................................................................................................311.000.001.00-----------------------------
.........................................................................................................................................................................................................ACAGGCGCCTGCCACCGCGCCGGCC........................251.000.00-1.00----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTCGGG...........................................................................................................................................................281.000.00------1.00-----------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTAATG.......................................................................................................................................................321.000.00--1.00---------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTTTCTCG........................................................................................................................................................321.000.00----1.00-------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTAGG........................................................................................................................................................311.000.00--1.00---------------------------
.............................................................................................................................TGGAGTGCAGTGGCACAACCTCCGCG...................................................................................................261.000.00-----1.00------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTATA.......................................................................................................................................................321.000.001.00-----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTATTA............................................................................................................................................................271.000.001.00-----------------------------
........................................................................................................................................................................................CCCAAGTAGCTGGGATTACAGGCGGCAG......................................281.000.00-1.00----------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTCAAA..........................................................................................................................................................301.000.00---1.00--------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTTAGG..........................................................................................................................................................301.000.00--1.00---------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTGAAAG.....................................................................................................................................................331.000.00------1.00-----------------------
.....................................................................................................................ACCCAGGCTGGAGTGCAGTGGCACAACCCCG......................................................................................................311.000.00-----1.00------------------------
.............GTGGTTTTAGGTGGACCAGGAAGCTA...................................................................................................................................................................................................................2611.001.00--------------------1.00---------
...................................................................CATTCTTTTTTTTTTTTTACTG.................................................................................................................................................................221.000.001.00-----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTATA........................................................................................................................................................311.000.001.00-----------------------------
..................................................................CCATTCTTTTTTTTTTTTTCTTA.................................................................................................................................................................231.000.00----1.00-------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTAAAT........................................................................................................................................................311.000.00--1.00---------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTCCAC.......................................................................................................................................................311.000.00---1.00--------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTCCCG..........................................................................................................................................................301.000.00--1.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTAAAA........................................................................................................................................................311.000.00--1.00---------------------------
................................................................TGCCATTCTTTTTTTTTTTTTCTA..................................................................................................................................................................241.000.00-1.00----------------------------
.................................................................................................................................................................AAGCGATTCTCCTGCCTCAGCCTGCTT..............................................................271.000.00-----------1.00------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTCAG.............................................................................................................................................................271.000.00----1.00-------------------------
...................................................................CATTCTTTTTTTTTTTTTCCCG.................................................................................................................................................................221.000.00---1.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTAAC.........................................................................................................................................................301.000.00----1.00-------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTCATG......................................................................................................................................................331.000.001.00-----------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTGAACG.....................................................................................................................................................331.000.00-1.00----------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTAAAG..........................................................................................................................................................301.000.00--1.00---------------------------
...................TTAGGTGGACCAGGAAGC.....................................................................................................................................................................................................................1811.001.00------------1.00-----------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTACG..........................................................................................................................................................291.000.00---1.00--------------------------
.........................................................................................................................................................................................................ACAGGCGCCTGCCACCGGGCT............................211.000.00-1.00----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTATAG.......................................................................................................................................................321.000.001.00-----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTTATTA......................................................................................................................................................331.000.001.00-----------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTAGCG......................................................................................................................................................321.000.00-1.00----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTCAAG........................................................................................................................................................311.000.00---1.00--------------------------
......................................................................................................................................................................................................ATTACAGGCGCCTGCCACCCGGC.............................231.000.00-1.00----------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTACAT......................................................................................................................................................321.000.00---1.00--------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTCTA.............................................................................................................................................................261.000.001.00-----------------------------
......................................................................................................................CCCAGGCTGGAGTGCAGTGGCACAACCCCG......................................................................................................301.000.00------1.00-----------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTATTT..........................................................................................................................................................301.000.00--1.00---------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTAACG............................................................................................................................................................271.000.00----1.00-------------------------
....................................................................ATTCTTTTTTTTTTTTTTTTTTTTTTTTGCGGG.....................................................................................................................................................331.000.00-----1.00------------------------
..................................................................CCATTCTTTTTTTTTTTTTTTTTTTTTTTAAT........................................................................................................................................................321.000.00--1.00---------------------------
.................TTTTAGGTGGACCAGG.........................................................................................................................................................................................................................1620.500.50-----------------------------0.50
.....................AGGTGGACCAGGAAGCT....................................................................................................................................................................................................................1720.500.50----------------------------0.50-

Antisense strand
ACAGACTGGCCGTGTGGTTTTAGGTGGACCAGGAAGCTATTTCTGGCAAGGTAAGTCCTGTCTCTGCCATTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGAAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCACAACCTCTGCTGCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCCTGCCACCGCGCCTGGCTAATTTTTGTAATTTTAGTAGAGA
...............................................................................................((((((...))))))...........((((.((((.((((.((.....)).)))).((..........))....)))).))))........................................................................
..............................................................63...................................................................................................................180....................................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR189782GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR390723(GSM850202)
total small RNA. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR189786SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR040035(GSM532920)
G001T. (cervix)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
....................................................................................................................................................................................................................CCACCGCGCCTGGCTAATTTTTGAGG............ 262.000.00-2.00----------------------------
...................................................................CATTCTTTTTTTTTTTTTTTTTTTTTTTC.......................................................................................................................................................... 292.000.00-------2.00----------------------
...........................................................................................................................................................AGGTTCAAGCGATTCTCTGGA.......................................................................... 212.000.00---------2.00--------------------
...........................................................................................................................................................AGGTTCAAGCGATTCTCCTTTT......................................................................... 221.000.00---------------1.00--------------
.............................................................................................................................................................................................................GCGCCTGCCACCGCGCCTGGCTAATTT.................. 271.000.00-1.00----------------------------
....................................................................................................................................................................................................................CCACCGCGCCTGGCTAAGGCA................. 211.000.00-1.00----------------------------
..........................................................................................................................GGCTGGAGTGCAGTGGCACAACCTGGG..................................................................................................... 271.000.00-1.00----------------------------
....................................................................................................................................................................................................................CCACCGCGCCTGGCTGACG................... 191.000.00-----1.00------------------------
...............................................................................................................................................................................................................GCCTGCCACCGCGCCTTT......................... 181.000.00-------------1.00----------------
...............................................................................................................................................................................................................GCCTGCCACCGCGCCTGGAC....................... 201.000.00----------------------1.00-------
.........................................................................................................................................................................................CCAAGTAGCTGGGATTACCTCT........................................... 221.000.00--------------------------1.00---
..................................................................AAAAAAAAAAAAAAAAAAAAAAAGAATGG........................................................................................................................................................... 2901.001.00-------1.00----------------------
.................................................................................................................................................................................................CTGGGATTACAGGCGCCTGTT.................................... 211.000.00---------1.00--------------------
....................................................................................................................................................................CGATTCTCCTGCCTCAGCCTCCCAGCC........................................................... 271.000.00-----1.00------------------------
...................................................................AAAAAAAAAAAAAAAAAAAAAAAAGAATG.......................................................................................................................................................... 2901.001.00-------1.00----------------------
................................................................................................................................................CTCTGCTGCCCAGGTTCAAGCGATTCTCCTAC.......................................................................... 321.000.00-----1.00------------------------
............................................................................................................................................................................................................GGCGCCTGCCACCGCGCCTGGCTCG..................... 251.000.00-----1.00------------------------
......................................................................................................................................................................................................ATTACAGGCGCCTGCCAAAA................................ 201.000.00--------------1.00---------------
................................................................................................................................................CTCTGCTGCCCAGGTTCAAGCGATTAC............................................................................... 271.000.00-1.00----------------------------
.....................................................................................................GAAGTCTCACTCTGTCACCTTTA.............................................................................................................................. 231.000.00-----------------------1.00------
................................................................................................................................................................................................................CCTGCCACCGCGCCTGGGGG...................... 201.000.00-----1.00------------------------
...................................................................................................................................................................................................................GCCACCGCGCCTGGCTAATATG................. 221.000.00-----1.00------------------------
................................................................................................................................................................................................................CCTGCCACCGCGCCTGGCTAATGGCG................ 261.000.00-----1.00------------------------
...................................................................AAAAAAAAAAAAAAAAAAAAAAAGAATG........................................................................................................................................................... 2801.001.00-------1.00----------------------
..................................................................................................GACGAAGTCTCACTCTCCGG.................................................................................................................................... 201.000.00-----1.00------------------------
..................................................................AAAAAAAAAAAAAAAAAAAAAAGAATGG............................................................................................................................................................ 2801.001.00---------------------1.00--------
..............................................................................................................................................................................................................CGCCTGCCACCGCGCCTGGCTAATGCTG................ 281.000.00-1.00----------------------------
................................................................................................................................................................................................................CCTGCCACCGCGCCTGGCTAATTGGCC............... 271.000.00-----1.00------------------------