ID: uc001sfl.2_intron_1_0_chr12_54675287_f
GENE: (2)
chr12:54675237-54675628+


(1)
AGO1.ip
(4)
AGO2.ip
(1)
AGO3.ip
(11)
B-CELL
(4)
BRAIN
(10)
BREAST
(46)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(3)
HEART
(9)
HELA
(5)
LIVER
(3)
OTHER
(1)
RRP40.ip
(39)
SKIN
(1)
TESTES
(1)
UTERUS
(2)
XRN.ip

Sense strand
AGAGCCTGAGGAGCCATTTTGAGCAATGGGGAACGCTCACGGACTGTGTGGTAAGATTTGGAAGGGACAAAGCAGTAAAACAGCCGATTTCCTTGGCTTATCTTGGTGCAGTCTTCTCCGAATGCTTATGAAAGTAGTTAATAGCATTATAGTTAGAGCTTTGTTGGCAAAGGAACGTCCTGCTTTGATTTTAAAAGCTACCTCTTAAATCTAGGGTAGTGGGAAACTGGACGACTTTTTATAAAAGGCTGGTGTAAAGTTTCCTATTGCCCTATTCAAAGTTAAAATGACAAAAGCTTTTGCGGTCAGACTTTGTGTTACATAAATTAACACTGTTCTCAGGTAATGAGAGATCCAAACACCAAGCGCTCCAGGGGCTTTGGGTTTGTCAC
..................................................((((((((((((..((((...(((.(((...((((((.....))))))....))).))).))))..))))))).))))).......(((((((((.(((....))).)))..)))))).......(((((................((((((.((.......))))))))((....)))))))...............................................................................................................................................................
............................................45..............................................................................................................................................................................................237.........................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR037935(GSM510473)
293cand3. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR029131(GSM416760)
MCF7. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR029130(GSM416759)
DLD2. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR343334SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR040018(GSM532903)
G701N. (cervix)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
GSM956925PAZD5SRR189782SRR191484(GSM715594)
12genomic small RNA (size selected RNA from t. (breast)
GSM359178(GSM359178)
hela_nucl_t. (hela)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)
SRR038860(GSM458543)
MM426. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
TAX577745(Rovira)
total RNA. (breast)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM416733(GSM416733)
HEK293. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM339994(GSM339994)
hues6. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
.....................................................................................................................................................................................................................................................................................................AAGCTTTTGCGGTCAGACTTTGTGTTACATA....................................................................31124.0024.00--15.00---9.00-------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TAGGGTAGTGGGAAACTGGACG...............................................................................................................................................................2218.008.005.00------1.00-------------1.00------------------------------------------------------------1.00---------------------------------------------------------
.................................................GGTAAGATTTGGAAGGGAC....................................................................................................................................................................................................................................................................................................................................1916.006.00----------6.00---------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGATTTGGAAGGGACAA..................................................................................................................................................................................................................................................................................................................................2035.675.671.00--3.33----------------------0.33------------------------------------------------------------------------------0.330.330.33--------------------------------
................................................................................................................................................................TTGTTGGCAAAGGAACGT......................................................................................................................................................................................................................1815.005.00----2.00------3.00--------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGATTTGGAAGGGACAAAGCAGTAAAACAG.....................................................................................................................................................................................................................................................................................................................3315.005.00--------------------------------2.00------------------------------------------------------1.00--1.00---1.00---------------------------------------------
...................................................................................................................................................................................................................TAGGGTAGTGGGAAACTGGACGTTT............................................................................................................................................................2515.008.00-------5.00------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................TTCAAAGTTAAAATGACAAAAGCTTTTGCGGTCAGACTTTGTGTTACATAAATTAACACTGTTCT.....................................................6515.005.00---------5.00----------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGATTTGGAAGGGACA...................................................................................................................................................................................................................................................................................................................................1934.334.330.67--2.00------------0.330.33--------0.33----------------------------------------------------------------------------0.33----0.33-------------------------------
............................................................................................................................................................................................................................................................................................................................................................................AGCGCTCCAGGGGCTTTGGGTTCGTC..264.000.00-3.00---1.00--------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGATTTGGAAGGGACAAAG................................................................................................................................................................................................................................................................................................................................2214.004.00---3.00----------------------------------------------1.00-----------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TAGGGTAGTGGGAAACTGGACGAT.............................................................................................................................................................2413.001.00----------------------3.00---------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GTGGGAAACTGGACGACTT...........................................................................................................................................................1913.003.00---3.00----------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGATTTGGAAGGGACAAAGCAGT............................................................................................................................................................................................................................................................................................................................2613.003.00----------------2.00----1.00----------------------------------------------------------------------------------------------------------------------
......................................ACGGACTGTGTGGTAAGAT...............................................................................................................................................................................................................................................................................................................................................1913.003.00--------------------1.00-----1.00------------------------------1.00----------------------------------------------------------------------------------
..................................................GTAAGATTTGGAAGGGACAAAGCAGTA...........................................................................................................................................................................................................................................................................................................................2713.003.00----------------------------------------2.00----------------------------1.00----------------------------------------------------------------------
...................................................................................................................................................................................................................TAGGGTAGTGGGAAACTGGA.................................................................................................................................................................2013.003.003.00-------------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGATTTGGAAGGGAC....................................................................................................................................................................................................................................................................................................................................1832.672.671.33---------------0.33----------------------------------------------------------------------------------0.67---------0.33------------------------------
.............................................GTGTGGTAAGATTTGGAAGGGACAA..................................................................................................................................................................................................................................................................................................................................2512.002.00------------------------2.00-------------------------------------------------------------------------------------------------------------------
...............................AACGCTCACGGACTGTGTGGTAAGATT..............................................................................................................................................................................................................................................................................................................................................2712.002.00----2.00---------------------------------------------------------------------------------------------------------------------------------------
......................GCAATGGGGAACGCTCACGGACTGTGTGGA....................................................................................................................................................................................................................................................................................................................................................302.000.00----2.00---------------------------------------------------------------------------------------------------------------------------------------
.......................CAATGGGGAACGCTCTGA...............................................................................................................................................................................................................................................................................................................................................................182.000.00------------------------------------2.00-------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................TAAAGTTTCCTATTGCCCTAT.....................................................................................................................2112.002.00----------------------------------------------1.00-----------------------1.00---------------------------------------------------------------------
.................................................................................................................................................................................................................TCTAGGGTAGTGGGAAACTGGACGACC............................................................................................................................................................272.000.00-----2.00--------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................CTAGGGTAGTGGGAAACTGGAC................................................................................................................................................................2212.002.00-------2.00------------------------------------------------------------------------------------------------------------------------------------
................................................TGGTAAGATTTGGAACAC......................................................................................................................................................................................................................................................................................................................................182.000.00--------------------------------------------------------1.00-1.00---------------------------------------------------------------------------------
................................................................................................................................................................................................AAAAGCTACCTCTTAAATCTAGGG................................................................................................................................................................................2412.002.00------------------2.00-------------------------------------------------------------------------------------------------------------------------
.........................................................TTGGAAGGGACAAAGCAG.............................................................................................................................................................................................................................................................................................................................1812.002.00-----------------------------1.00--------------------------------------------------------------1.00-----------------------------------------------
.............................................................................................................................................................................................................TAAATCTAGGGTAGTGGGAAACTGGACGACTTTT.........................................................................................................................................................3412.002.00-------------------------------------------2.00------------------------------------------------------------------------------------------------
.....CTGAGGAGCCATTTTGAGC................................................................................................................................................................................................................................................................................................................................................................................1902.002.00-------------2.00------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................GTTGGCAAAGGAACGTCCTGCT................................................................................................................................................................................................................2212.002.001.00--------------------------------------------------------------------------1.00----------------------------------------------------------------
.........................................................................AGTAAAACAGCCGATTTCCTTGG........................................................................................................................................................................................................................................................................................................2312.002.00-------------------------2.00------------------------------------------------------------------------------------------------------------------
..................................................GTAAGATTTGGAAGGGACAAAGCAGTAAAACA......................................................................................................................................................................................................................................................................................................................3212.002.00---------1.00-------------------------------------------------------------------------------1.00--------------------------------------------------
.....................................CACGGACTGTGTGGTAAGATT..............................................................................................................................................................................................................................................................................................................................................2112.002.00-------------------------------2.00------------------------------------------------------------------------------------------------------------
..............................GAACGCTCACGGACTGTGTGGTAAGATTTGGAAGGGACAAAGCAGTAAAACAGCCGATTTCCTTGGCTTATC..................................................................................................................................................................................................................................................................................................7212.002.00--------------------------------------------2.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................GTAGTTAATAGCATTATAGTTAGAGCTTTGT....................................................................................................................................................................................................................................3112.002.00----2.00---------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................ACACCAAGCGCTCCAGGGGCTTCGGG........262.000.00-----2.00--------------------------------------------------------------------------------------------------------------------------------------
........................................................TTTGGAAGGGACAAAGCA..............................................................................................................................................................................................................................................................................................................................1821.501.50------------------------------------------------1.50-------------------------------------------------------------------------------------------
........................AATGGGGAACGCTCACGGACTGTGTGGT....................................................................................................................................................................................................................................................................................................................................................2881.251.250.50-------0.12-------------------------------------------------------------------------------------------0.62---------------------------------------
........................................................................................TTCCTTGGCTTATCTTGG..............................................................................................................................................................................................................................................................................................1811.001.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................GCAGTCTTCTCCGAATGCTTATGAAAGTAGTTAATAGCATTATAGTTAGAGCTTTGTTGGCAAAGGAACGTCC....................................................................................................................................................................................................................7311.001.00------------------------------------------------------------------------------------1.00-------------------------------------------------------
.................................CGCTCACGGACTGTGTGGTAAGATTTGGAAG........................................................................................................................................................................................................................................................................................................................................3111.001.00------------1.00-------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................CGGTCAGACTTTGTGTTACATAAAT.................................................................2511.001.00------------------------------------------------------------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GGGTAGTGGGAAACTGGA.................................................................................................................................................................1811.001.00------------------------------------------------------------------------1.00-------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................AAGCGCTCCAGGGGCTTCGGG........211.000.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
........AGGAGCCATTTTGAGCATTA............................................................................................................................................................................................................................................................................................................................................................................201.000.00--------------------1.00-----------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................AAAGCTTTTGCGGTCAGACTTTGTG...........................................................................2511.001.00-----------------------------------------1.00--------------------------------------------------------------------------------------------------
............................GGGAACGCTCACGGACTGTGTGGAG...................................................................................................................................................................................................................................................................................................................................................251.000.001.00-------------------------------------------------------------------------------------------------------------------------------------------
..........................TGGGGAACGCTCACGGACTGTGG.......................................................................................................................................................................................................................................................................................................................................................231.000.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------
.....................................CACGGACTGTGTGGTAAGATTTGGAAGGGACAAAG................................................................................................................................................................................................................................................................................................................................3511.001.00--------1.00-----------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................TTTTTATAAAAGGCTGGTGTAAAGTTTC.................................................................................................................................2811.001.00----------------------------------1.00---------------------------------------------------------------------------------------------------------
............................GGGAACGCTCACGGACTGTGTGGCAAT.................................................................................................................................................................................................................................................................................................................................................271.000.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
...................................CTCACGGACTGTGTGGTAAGT................................................................................................................................................................................................................................................................................................................................................211.000.00---------------------------------------------------------------1.00----------------------------------------------------------------------------
...................................................................................................................................................TATAGTTAGAGCTTTGTTGGC................................................................................................................................................................................................................................2111.001.00------------------------------1.00-------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................ACACCAAGCGCTCCAGGGGCTGGG..........241.000.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------
...................................CTCACGGACTGTGTGGTAT..................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------1.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................AAGCTTTTGCGGTCAGACTTCGTG...........................................................................241.000.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TAGGGTAGTGGGAAACTGGACGA..............................................................................................................................................................2311.001.00----------------------------------------------------------------------------------------1.00---------------------------------------------------
.............................................................................................................................................................GCTTTGTTGGCAAAGGAA.........................................................................................................................................................................................................................1821.001.00-----------------------------------1.00--------------------------------------------------------------------------------------------------------
.....................................CACGGACTGTGTGGTAATGAA..............................................................................................................................................................................................................................................................................................................................................211.000.00--------------------------------------------------------------------------------------------------1.00-----------------------------------------
.................................................................................................................................................................................................................TCTAGGGTAGTGGGAAACTGGA.................................................................................................................................................................2211.001.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------
...................................CTCACGGACTGTGTGGTAAGATTTGGAAGGG......................................................................................................................................................................................................................................................................................................................................3111.001.00------------------------------------------------------1.00-------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................AGGTAATGAGAGATCCAA..................................1821.001.00---------------------------------1.00----------------------------------------------------------------------------------------------------------
...........................................................................................CTTGGCTTATCTTGGTGCAGTCT......................................................................................................................................................................................................................................................................................2311.001.00--------1.00-----------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................AGGAACGTCCTGCTTTGATTT.........................................................................................................................................................................................................2111.001.00-------------------1.00------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................ATAGTTAGAGCTTTGTTG..................................................................................................................................................................................................................................1811.001.001.00-------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................CTAGGGTAGTGGGAAACTGGACG...............................................................................................................................................................2311.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------
.....................................CACGGACTGTGTGGTAAGATTTGGAAGGGACA...................................................................................................................................................................................................................................................................................................................................3211.001.00--------1.00-----------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................AAAAGCTACCTCTTAAATCTA...................................................................................................................................................................................2111.001.00------------------1.00-------------------------------------------------------------------------------------------------------------------------
...........................................CTGTGTGGTAAGATTTGGAAG........................................................................................................................................................................................................................................................................................................................................2111.001.00----------------------------1.00---------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................AGGGGCTTTGGGTTTGTCACTGAC241.000.00-----------------------------------------------------------------1.00--------------------------------------------------------------------------
................................................................................................................................................................................................................ATCTAGGGTAGTGGGAAACTGGACGA..............................................................................................................................................................2611.001.00---------------------------------------------------------------------------------1.00----------------------------------------------------------
................................................................................CAGCCGATTTCCTTGGCTTATCTTGG..............................................................................................................................................................................................................................................................................................2611.001.00-----------------------1.00--------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................TTGCGGTCAGACTTTG.............................................................................1611.001.00------------1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TAGGGTAGTGGGAAACTGGACGACT............................................................................................................................................................2511.001.00--------------------------------------------------------------1.00-----------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................GTGTTACATAAATTAACACT..........................................................2011.001.00------------1.00-------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................AAGCGCTCCAGGGGCTTTGGGTTTGCC..271.000.00---------------------------1.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................TCCAGGGGCTTTGGGTTTGCCAC231.000.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................TTTTGCGGTCAGACTGC..............................................................................171.000.00-------------------------------------------------------------------------1.00------------------------------------------------------------------
......................................ACGGACTGTGTGGTAAGATTTGG...........................................................................................................................................................................................................................................................................................................................................2311.001.00------------------------------1.00-------------------------------------------------------------------------------------------------------------
..................................................GTAAGATTTGGAAGGGACAAAGCAAA............................................................................................................................................................................................................................................................................................................................261.000.00----------------------------------1.00---------------------------------------------------------------------------------------------------------
........................AATGGGGAACGCTCACGTA.............................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------1.00--------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................AAGCGCTCCAGGGGCTTTGGGTC......231.000.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GTGGGAAACTGGACGACTTTTTATAA....................................................................................................................................................2611.001.00---------------------------------1.00----------------------------------------------------------------------------------------------------------
.........................................................TTGGAAGGGACAAAGCAGTAAAACAG.....................................................................................................................................................................................................................................................................................................................2611.001.00---------------------1.00----------------------------------------------------------------------------------------------------------------------
.....................................CACGGACTGTGTGGTATT.................................................................................................................................................................................................................................................................................................................................................181.000.00--------------------1.00-----------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................CTCAGGTAATGAGAGATCCAAACACCAAGCGC.......................3211.001.00-------------------------------------------------------1.00------------------------------------------------------------------------------------
..................................................GTAAGATTTGGAAGGGACAAAGCCGT............................................................................................................................................................................................................................................................................................................................261.000.00---------------------------------------1.00----------------------------------------------------------------------------------------------------
...............................AACGCTCACGGACTGTGTGGTAACGAG..............................................................................................................................................................................................................................................................................................................................................271.000.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................AAAGCTTTTGCGGTCAGACTTTGT............................................................................2411.001.00-----------------1.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................CTACCTCTTAAATCTAGGG................................................................................................................................................................................1911.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------
..........................................................................GTAAAACAGCCGATTTCC............................................................................................................................................................................................................................................................................................................1811.001.00-------------------------1.00------------------------------------------------------------------------------------------------------------------
..................................GCTCACGGACTGTGTC......................................................................................................................................................................................................................................................................................................................................................161.000.00----------------------------------------------------1.00---------------------------------------------------------------------------------------
..............................................................................................................................................................CTTTGTTGGCAAAGGAACGT......................................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------1.00--------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................AGCGCTCCAGGGGCTTTGGGTCTGT...251.000.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TTACATAAATTAACACTGT........................................................1911.001.00-----------------------------------------------------1.00--------------------------------------------------------------------------------------
...........................................................................................CTTGGCTTATCTTGGTGCAGTC.......................................................................................................................................................................................................................................................................................2211.001.00--------1.00-----------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................TAGTGGGAAACTGGACGA..............................................................................................................................................................1811.001.00-----------------------------------------------------------1.00--------------------------------------------------------------------------------
..............................GAACGCTCACGGACTGGG........................................................................................................................................................................................................................................................................................................................................................181.000.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................CTCCGAATGCTTATGAAAGTAGTTAATAG........................................................................................................................................................................................................................................................2911.001.00--------------------------------------------------------------------1.00-----------------------------------------------------------------------
...........................................................................................................................................................................................................................TGGGAAACTGGACGACTTTTTA.......................................................................................................................................................2211.001.00-----------------------1.00--------------------------------------------------------------------------------------------------------------------
..AGCCTGAGGAGCCATTTTGA..................................................................................................................................................................................................................................................................................................................................................................................2001.001.00------------------------------------------------------------------------------1.00-------------------------------------------------------------
.....................AGCAATGGGGAACGCTCACGGACTGTGCGC.....................................................................................................................................................................................................................................................................................................................................................301.000.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................AGGGGCTTTGGGTTTGTGATA211.000.00-------------------1.00------------------------------------------------------------------------------------------------------------------------
.................................................GGTAAGATTTGGAAGGGACAAA.................................................................................................................................................................................................................................................................................................................................2211.001.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------
...................................CTCACGGACTGTGTGGTAAGATTTGGAAGGGACA...................................................................................................................................................................................................................................................................................................................................3411.001.00--------1.00-----------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................AGCTTTGTTGGCAAAGGAACGT......................................................................................................................................................................................................................2211.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------
.....................................CACGGACTGTGTGGTAAGATTT.............................................................................................................................................................................................................................................................................................................................................2211.001.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................TTGCGGTCAGACTTTGTGTTAC.......................................................................2211.001.00--------------------------------------------------------------------------------------1.00-----------------------------------------------------
.....................................CACGGACTGTGTGGTAAGATTTGGA..........................................................................................................................................................................................................................................................................................................................................2511.001.00-------------------------------------------------------------------------------------1.00------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................TTGCGGTCAGACTTTGTGTTA........................................................................2111.001.00--------------------------1.00-----------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................TTTTGCGGTCAGACTTTG.............................................................................1811.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GTGGGAAACTGGACGAC.............................................................................................................................................................1711.001.00-------------------------------------------------------------------------------------------------1.00------------------------------------------
............................................................................................................................................................................................................................................................................................................TGCGGTCAGACTTTGTGTTA........................................................................2011.001.001.00-------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................GCCCTATTCAAAGTTAAAATGACAAAAG................................................................................................2811.001.00--------------------------------------1.00-----------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................GCTTTTGCGGTCAGACTT...............................................................................1811.001.00----------------------------1.00---------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................AGATCCAAACACCAAGCGCTCCAGGGGCC.............291.000.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TAGGGTAGTGGGAAACTGGACGT..............................................................................................................................................................2311.008.00-------------------------------------------------------------------------------------------1.00------------------------------------------------
...................................................................................................................................................................................................................TAGGGTAGTGGGAAACTGGACGAC.............................................................................................................................................................2411.001.00-------------------------------------------------1.00------------------------------------------------------------------------------------------
.....................................CACGGACTGTGTGGTAAGAT...............................................................................................................................................................................................................................................................................................................................................2011.001.00------------------------------------------1.00-------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................ATTAACACTGTTCTCAG..................................................1711.001.00-----------------------1.00--------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TAGTTAGAGCTTTGTTGGCAAAG............................................................................................................................................................................................................................2311.001.00-----------------------------------------1.00--------------------------------------------------------------------------------------------------
...................................CTCACGGACTGTGTGGGAAT.................................................................................................................................................................................................................................................................................................................................................201.000.00------------------------------------------------------------------1.00-------------------------------------------------------------------------
.......................................................................................................................................................GTTAGAGCTTTGTTGGCAAAGGA..........................................................................................................................................................................................................................2311.001.00------------1.00-------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CATTATAGTTAGAGCTTGT.....................................................................................................................................................................................................................................191.000.00----------------1.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................ATTATAGTTAGAGCTTTGTTGGC................................................................................................................................................................................................................................2311.001.00----------------------------------------------------------------------------1.00---------------------------------------------------------------
..................................................................................................................................AAAGTAGTTAATAGCTAG....................................................................................................................................................................................................................................................181.000.00-------------------------------------------------------------------------------1.00------------------------------------------------------------
.....CTGAGGAGCCATTTTGAG.................................................................................................................................................................................................................................................................................................................................................................................1801.001.00-----------------------------------------------------------------------------------1.00--------------------------------------------------------
.........................................................TTGGAAGGGACAAAGCAGTA...........................................................................................................................................................................................................................................................................................................................2011.001.00---------------------------------------------------------------------------------------------1.00----------------------------------------------
..........................TGGGGAACGCTCACGGC.............................................................................................................................................................................................................................................................................................................................................................171.000.00--------------------------------------------------------------------------------1.00-----------------------------------------------------------
..............................GAACGCTCACGGACTGTGTTGTA...................................................................................................................................................................................................................................................................................................................................................231.000.00---------------1.00----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TAGGGTAGTGGGAAACTGGACGAA.............................................................................................................................................................2411.001.001.00-------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................AGCGCTCCAGGGGCTTTGGGTTCGT...251.000.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................AGCGCTCCAGGGGCTTTGGCTTG.....231.000.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................AGTTAGAGCTTTGTTGGCAAAGGAACGTCCTGC.................................................................................................................................................................................................................3311.001.00-------------------------------------------------------------------1.00------------------------------------------------------------------------
..........................TGGGGAACGCTCACGGACAAA.........................................................................................................................................................................................................................................................................................................................................................211.000.00---------------------------------------------------1.00----------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................AATGAGAGATCCAAACACC.............................1901.001.00-------------1.00------------------------------------------------------------------------------------------------------------------------------
....................................TCACGGACTGTGTGGTAATA................................................................................................................................................................................................................................................................................................................................................201.000.00------------------------1.00-------------------------------------------------------------------------------------------------------------------
...................................CTCACGGACTGTGTGGTTAG.................................................................................................................................................................................................................................................................................................................................................201.000.00------------------------------------------1.00-------------------------------------------------------------------------------------------------
..................................................................................................................................................TTATAGTTAGAGCTTTGTTGGCAA..............................................................................................................................................................................................................................2411.001.00-----------------------------------------------1.00--------------------------------------------------------------------------------------------
..................................................................................................................................................TTATAGTTAGAGCTTTGTTGGC................................................................................................................................................................................................................................2211.001.00---------------------------------------1.00----------------------------------------------------------------------------------------------------
......................................ACGGACTGTGTGGTAAGATTTGGAAGGGA.....................................................................................................................................................................................................................................................................................................................................2911.001.00--------------------------------------1.00-----------------------------------------------------------------------------------------------------
..........................................................TGGAAGGGACAAAGCAGTAAAACAG.....................................................................................................................................................................................................................................................................................................................2511.001.00------------------------------------------------------------------------------------------------1.00-------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................AATGAGAGATCCAAACACCA............................2001.001.00-------------1.00------------------------------------------------------------------------------------------------------------------------------
......................................ACGGACTGTGTGGTAAGATTT.............................................................................................................................................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------------------1.00--------------------------------------------------------------
..................................................................................................................................................................................................................CTAGGGTAGTGGGAAACTGGACGA..............................................................................................................................................................2411.001.00------------1.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................AGGGTAGTGGGAAACTGGACGACT............................................................................................................................................................2411.001.00-------------------1.00------------------------------------------------------------------------------------------------------------------------
...GCCTGAGGAGCCATTTTGAGCAATGGGTAAC......................................................................................................................................................................................................................................................................................................................................................................311.000.00---------------1.00----------------------------------------------------------------------------------------------------------------------------
.......................CAATGGGGAACGCTCACGGACCG..........................................................................................................................................................................................................................................................................................................................................................231.000.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
...........................GGGGAACGCTCACGGACTGTAAGA.....................................................................................................................................................................................................................................................................................................................................................241.000.00--------------------------------------------------------------------------1.00-----------------------------------------------------------------
.....................................CACGGACTGTGTGGTAATT................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------------------------1.00--------------------------------------------------------------------------------------------------------
.........................................................................................................................................................TAGAGCTTTGTTGGCAAAGGAACGT......................................................................................................................................................................................................................2511.001.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------
..........................TGGGGAACGCTCACGGACTGTGTGG.....................................................................................................................................................................................................................................................................................................................................................2580.880.880.250.12------0.12------------------------------------0.12---0.12---------------------------------------------------------------------------------------0.12--
...........................GGGGAACGCTCACGGACTGTGTGGT....................................................................................................................................................................................................................................................................................................................................................2580.750.750.62---------------------------------------------0.12---------------------------------------------------------------------------------------------
..........................TGGGGAACGCTCACGGACTGTGTGGTAA..................................................................................................................................................................................................................................................................................................................................................2860.670.67-------------------------------------------------0.33-------0.17-----------------------------------------------------0.17----------------------------
...........................GGGGAACGCTCACGGACTGTGTGGTA...................................................................................................................................................................................................................................................................................................................................................2660.670.67----------------------------------------------0.33---0.17-----------------------------------------------------------------------------0.17-----------
.....................AGCAATGGGGAACGCTCACGGACTGTGTGG.....................................................................................................................................................................................................................................................................................................................................................3080.620.62-0.12------0.25--------------------------------------------0.12-------------------------------------------------------------------------------0.12------
.......................CAATGGGGAACGCTCACGGACTGTGTGG.....................................................................................................................................................................................................................................................................................................................................................2880.620.62---------------0.25---------------------------------------0.12--0.12-------------------------------------------------------------------------------0.12-
..................................................GTAAGATTTGGAAGGGAAA...................................................................................................................................................................................................................................................................................................................................1950.600.20---------------------------------------------------0.20-------------------------------------------------------------------0.200.20-------------------
.........................ATGGGGAACGCTCACGGACTGTGTG......................................................................................................................................................................................................................................................................................................................................................2580.500.50---------------0.12-------------------------------------------0.12------------------------------------------------------0.25-------------------------
..............................................................AGGGACAAAGCAGTAAAA........................................................................................................................................................................................................................................................................................................................1820.500.50------------------------------------------------------------------------------------------------------0.50-------------------------------------
............................GGGAACGCTCACGGACTGTGTGGTA...................................................................................................................................................................................................................................................................................................................................................2560.500.500.50-------------------------------------------------------------------------------------------------------------------------------------------
...........................GGGGAACGCTCACGGACTGTGTGG.....................................................................................................................................................................................................................................................................................................................................................2480.500.500.25-------0.12------------------------------------------------------------------------------------------------------0.12----------------------------
..........................TGGGGAACGCTCACGGACTGTGTGGT....................................................................................................................................................................................................................................................................................................................................................2680.500.50-0.12-------------------------------------------0.38----------------------------------------------------------------------------------------------
.........................ATGGGGAACGCTCACGGACTGTGTGG.....................................................................................................................................................................................................................................................................................................................................................2680.500.50--------0.12--------------------------------------------------------------------------------------------------------0.25-0.12------------------------
.....................................................AGATTTGGAAGGGACAAAGCA..............................................................................................................................................................................................................................................................................................................................2120.500.50--------------0.50-----------------------------------------------------------------------------------------------------------------------------
........................AATGGGGAACGCTCACGGACTGTGTGG.....................................................................................................................................................................................................................................................................................................................................................2780.500.50-0.12------0.25------0.12----------------------------------------------------------------------------------------------------------------------------
...........................GGGGAACGCTCACGGACTGTGTG......................................................................................................................................................................................................................................................................................................................................................2380.500.500.25--------------0.12------------0.12---------------------------------------------------------------------------------------------------------------
........................AATGGGGAACGCTCACGGACTGTGT.......................................................................................................................................................................................................................................................................................................................................................2580.500.500.25-------0.25-----------------------------------------------------------------------------------------------------------------------------------
......................GCAATGGGGAACGCTCACGGACTGTGTGGTA...................................................................................................................................................................................................................................................................................................................................................3160.500.50---------------0.17----------------------------------------------------------------------------------------------0.17--------------0.17--------------
...........................GGGGAACGCTCACGGACTGTGTGGTAA..................................................................................................................................................................................................................................................................................................................................................2760.500.50--------------0.17-----------------------------------0.17-------------------------------------------------------------------------0.17---------------
............................................................................................................................................................................................................................................................................................................................................................................AGCGCTCCAGGGGCTTTGGGTTTGTCAC2860.500.50-0.50------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................AAAGTAGTTAATAGCATTATA.................................................................................................................................................................................................................................................2120.500.50-----------------------------------------------------------------------------------------------------0.50--------------------------------------
......................GCAATGGGGAACGCTCACGGACTGTGTG......................................................................................................................................................................................................................................................................................................................................................2880.380.380.12--0.25----------------------------------------------------------------------------------------------------------------------------------------
.........................ATGGGGAACGCTCACGGACTGTGTGGC....................................................................................................................................................................................................................................................................................................................................................2780.380.50-0.38------------------------------------------------------------------------------------------------------------------------------------------
.............................GGAACGCTCACGGACTGTGTGGTA...................................................................................................................................................................................................................................................................................................................................................2460.330.33-----------------------------------------------------0.17----------------------------------------------------------0.17---------------------------
.......................CAATGGGGAACGCTCACGGACTGTGTGGTA...................................................................................................................................................................................................................................................................................................................................................3060.330.33---------------0.17--------------------------------------------------------------------------------------------------------------0.17-------------
.....................AGCAATGGGGAACGCTCACGGACTGTGTGGTA...................................................................................................................................................................................................................................................................................................................................................3260.330.33--------0.33-----------------------------------------------------------------------------------------------------------------------------------
..............................GAACGCTCACGGACTGTGTGGTA...................................................................................................................................................................................................................................................................................................................................................2360.330.33--------------------------------------------------------------------------------------------------------------------------0.17------0.17----------
............................................................................................................................................................................................................................................................................................................................................................................AGCGCTCCAGGGGCTTTGGGTTTG....2490.330.33-0.22-----------------0.11------------------------------------------------------------------------------------------------------------------------
..................TTGAGCAATGGGGAACGCTCACGGACTGTGTGG.....................................................................................................................................................................................................................................................................................................................................................3370.290.29-0.29------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CGCTCCAGGGGCTTTGGGTTTGTC..2470.290.29---------------------------0.29----------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................ACCAAGCGCTCCAGGGGCTTTGGGTT......2680.250.25------------------0.25-------------------------------------------------------------------------------------------------------------------------
..........................TGGGGAACGCTCACGGACTGTGTG......................................................................................................................................................................................................................................................................................................................................................2480.250.25------------------------------------------------------0.25-------------------------------------------------------------------------------------
......................GCAATGGGGAACGCTCACGGACTGTGTGGT....................................................................................................................................................................................................................................................................................................................................................3080.250.25--------0.12-------------------------------------------0.12---------------------------------------------------------------------------------------
..........................TGGGGAACGCTCACGGACTGTGT.......................................................................................................................................................................................................................................................................................................................................................2380.250.25-----------------------------------------------------------------------------------------------------------------------------------0.120.12-------
......................GCAATGGGGAACGCTCACGGACTGTGT.......................................................................................................................................................................................................................................................................................................................................................2780.250.25---------------------------------------------0.12---------0.12------------------------------------------------------------------------------------
....................GAGCAATGGGGAACGCTCACGGACTGTGTGGT....................................................................................................................................................................................................................................................................................................................................................3280.250.25--------------------------------------------------------------------------------------------------------------0.12-------------------------0.12---
.............................................................................................................................................................................................................................................................................................AATGACAAAAGCTTTTG..........................................................................................1740.250.25----------------------------------------------0.25---------------------------------------------------------------------------------------------
.........................ATGGGGAACGCTCACGGACTGTGT.......................................................................................................................................................................................................................................................................................................................................................2480.250.25--------------------------------------------------------------------------------------------------------0.25-----------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GCGCTCCAGGGGCTTTGGGT.......2090.220.22--------------------------------------------------------------------------------------------------------------------0.22-----------------------
...........................................................................................................................................................................................................................................................................................................................................................................AAGCGCTCCAGGGGCTTTGGGTTCGTC..2790.220.11-0.11---0.11--------------------------------------------------------------------------------------------------------------------------------------
.................TTTGAGCAATGGGGAACGCTCACGGACTGTG........................................................................................................................................................................................................................................................................................................................................................3190.220.22-0.22------------------------------------------------------------------------------------------------------------------------------------------
..................TTGAGCAATGGGGAACGCTCACGGACTGT.........................................................................................................................................................................................................................................................................................................................................................2990.220.22---------------0.11-----------------------------0.11----------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................AGCGCTCCAGGGGCTTTGGGTTTGCC..2690.220.33-0.22------------------------------------------------------------------------------------------------------------------------------------------
.................TTTGAGCAATGGGGAACGCTCACGGACTGT.........................................................................................................................................................................................................................................................................................................................................................3090.220.22-------------------------------------------------------------------------------------------------------0.110.11-----------------------------------
............GCCATTTTGAGCAATGGGGAACGCTCACGGA.............................................................................................................................................................................................................................................................................................................................................................3190.220.22---------------------------------------------------------------------------------------------------------------------0.22----------------------
..................................................GTAAGATTTGGAAGGGA.....................................................................................................................................................................................................................................................................................................................................1750.200.20----------------------------------------------------------------------------------------------------------------------0.20---------------------
............................GGGAACGCTCACGGACTGTGTGGTAA..................................................................................................................................................................................................................................................................................................................................................2660.170.17-----------------------------------------------0.17--------------------------------------------------------------------------------------------
.............................GGAACGCTCACGGACTGTGTGGTAA..................................................................................................................................................................................................................................................................................................................................................2560.170.17---------------------------------------------------------------------------------------------------------------------------0.17----------------
........................AATGGGGAACGCTCACGGACTGTGTGGTA...................................................................................................................................................................................................................................................................................................................................................2960.170.17---------------0.17----------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................TCTAGGGTAGTGGGA........................................................................................................................................................................1560.170.17--------------------------------------------------------0.17-----------------------------------------------------------------------------------
.................................CGCTCACGGACTGTGTGGTA...................................................................................................................................................................................................................................................................................................................................................2060.170.17---------------------------------------------------0.17----------------------------------------------------------------------------------------
.................................................................................................................................................................................................................TCTAGGGTAGTGGGATCAT....................................................................................................................................................................1960.170.17-------------------------------------------------------------------------------------------------------------------------0.17------------------
...................TGAGCAATGGGGAACGCTCACGGACTGTGTGGTAA..................................................................................................................................................................................................................................................................................................................................................3560.170.17-------------------------------------------------------------------------------------------------------------------------------0.17------------
............................................................................................................................................................................................................................................................................................................................................................................AGCGCTCCAGGGGCTTTGGGTTTGTC..2660.170.17--------------0.17-----------------------------------------------------------------------------------------------------------------------------
...................TGAGCAATGGGGAACGCTCACGGACTGTGTGGTA...................................................................................................................................................................................................................................................................................................................................................3460.170.17---------------0.17----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................AGCGCTCCAGGGGCTTTGGGTTTGTCACAC3060.170.50-0.17------------------------------------------------------------------------------------------------------------------------------------------
.................................CGCTCACGGACTGTGTGGTAA..................................................................................................................................................................................................................................................................................................................................................2160.170.17-----------------------------------------------0.17--------------------------------------------------------------------------------------------
..........................TGGGGAACGCTCACGGACTGTGTGGTA...................................................................................................................................................................................................................................................................................................................................................2760.170.17-----------------------------------------------0.17--------------------------------------------------------------------------------------------
.........................ATGGGGAACGCTCACGGACTGTGTGGTA...................................................................................................................................................................................................................................................................................................................................................2860.170.17---------------0.17----------------------------------------------------------------------------------------------------------------------------
...........................GGGGAACGCTCACGGACTGTGTGGTAGT.................................................................................................................................................................................................................................................................................................................................................2860.170.67-----------------------------------------------0.17--------------------------------------------------------------------------------------------
.....................AGCAATGGGGAACGCTCACGGACTGTGTGGT....................................................................................................................................................................................................................................................................................................................................................3180.120.12--------0.12-----------------------------------------------------------------------------------------------------------------------------------
...........................GGGGAACGCTCACGGACTGTGT.......................................................................................................................................................................................................................................................................................................................................................2280.120.12---------------0.12----------------------------------------------------------------------------------------------------------------------------
.........................ATGGGGAACGCTCACGGACTGTGTGGCAAT.................................................................................................................................................................................................................................................................................................................................................3080.120.50-----0.12--------------------------------------------------------------------------------------------------------------------------------------
.......................CAATGGGGAACGCTCACGGACTGTGTGGT....................................................................................................................................................................................................................................................................................................................................................2980.120.12--------0.12-----------------------------------------------------------------------------------------------------------------------------------
...................TGAGCAATGGGGAACGCTCACGGACTGTGTGGT....................................................................................................................................................................................................................................................................................................................................................3380.120.12---------------0.12----------------------------------------------------------------------------------------------------------------------------
.......................CAATGGGGAACGCTCACGGACTGTGTG......................................................................................................................................................................................................................................................................................................................................................2780.120.12---------------------------------------------0.12----------------------------------------------------------------------------------------------
...................TGAGCAATGGGGAACGCTCACGGACTGTGTGG.....................................................................................................................................................................................................................................................................................................................................................3280.120.12-0.12------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................CAAACACCAAGCGCTCCAGGGGCTTTGG.........2880.120.12----------------------------------------------------------------------------------------------------------------------------------0.12---------
.......................CAATGGGGAACGCTCACGGACTGTGT.......................................................................................................................................................................................................................................................................................................................................................2680.120.120.12-------------------------------------------------------------------------------------------------------------------------------------------
..........................TGGGGAACGCTCACGGACTGTGTGGC....................................................................................................................................................................................................................................................................................................................................................2680.120.88-0.12------------------------------------------------------------------------------------------------------------------------------------------
........................AATGGGGAACGCTCACGGACTGTGTG......................................................................................................................................................................................................................................................................................................................................................2680.120.12--------0.12-----------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................CAAGCGCTCCAGGGGCTTTGGGTTTGT...2780.120.12--------------------------------------------------------------------------------------------------------------------------------------0.12-----
.........................ATGGGGAACGCTCACGGACTGTGTGGT....................................................................................................................................................................................................................................................................................................................................................2780.120.12---------------------------------------------------------------------------------------------------------------------------------------0.12----
...........................................................................................................................................................................................................................................................................................................................................................................AAGCGCTCCAGGGGCTTTGGGTT......2390.110.11--------------------------------------------------0.11-----------------------------------------------------------------------------------------
..............CATTTTGAGCAATGGGGAACGCTCACGGACTGT.........................................................................................................................................................................................................................................................................................................................................................3390.110.11----------------------------------------------------------------------------------------------------------------0.11---------------------------
..................TTGAGCAATGGGGAACGCTCACGG..............................................................................................................................................................................................................................................................................................................................................................2490.110.11-------------------------------------------------------------------------------------------------------------------0.11------------------------
..............CATTTTGAGCAATGGGGAACGCTCACGGACTG..........................................................................................................................................................................................................................................................................................................................................................3290.110.11---------------0.11----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................AGCGCTCCAGGGGCTTTGGGTTTGCCAC2890.110.33-0.11------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................ACCAAGCGCTCCAGGGGCTTT...........2190.110.11--------------0.11-----------------------------------------------------------------------------------------------------------------------------
..............CATTTTGAGCAATGGGGAACGCTCACGGACTGTG........................................................................................................................................................................................................................................................................................................................................................3490.110.11------------------------------------------------------------0.11-------------------------------------------------------------------------------
..................TTGAGCAATGGGGAACGCTCACGGACTGTG........................................................................................................................................................................................................................................................................................................................................................3090.110.11-------------------------------------------------------------------------------------------------------------------------------------------0.11
..........GAGCCATTTTGAGCAATGGGGAACGCTCACGGACTG..........................................................................................................................................................................................................................................................................................................................................................3690.110.11--------0.11-----------------------------------------------------------------------------------------------------------------------------------

Antisense strand
AGAGCCTGAGGAGCCATTTTGAGCAATGGGGAACGCTCACGGACTGTGTGGTAAGATTTGGAAGGGACAAAGCAGTAAAACAGCCGATTTCCTTGGCTTATCTTGGTGCAGTCTTCTCCGAATGCTTATGAAAGTAGTTAATAGCATTATAGTTAGAGCTTTGTTGGCAAAGGAACGTCCTGCTTTGATTTTAAAAGCTACCTCTTAAATCTAGGGTAGTGGGAAACTGGACGACTTTTTATAAAAGGCTGGTGTAAAGTTTCCTATTGCCCTATTCAAAGTTAAAATGACAAAAGCTTTTGCGGTCAGACTTTGTGTTACATAAATTAACACTGTTCTCAGGTAATGAGAGATCCAAACACCAAGCGCTCCAGGGGCTTTGGGTTTGTCAC
..................................................((((((((((((..((((...(((.(((...((((((.....))))))....))).))).))))..))))))).))))).......(((((((((.(((....))).)))..)))))).......(((((................((((((.((.......))))))))((....)))))))...............................................................................................................................................................
............................................45..............................................................................................................................................................................................237.........................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR037935(GSM510473)
293cand3. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR029131(GSM416760)
MCF7. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR029130(GSM416759)
DLD2. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR343334SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR040018(GSM532903)
G701N. (cervix)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
GSM956925PAZD5SRR189782SRR191484(GSM715594)
12genomic small RNA (size selected RNA from t. (breast)
GSM359178(GSM359178)
hela_nucl_t. (hela)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)
SRR038860(GSM458543)
MM426. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
TAX577745(Rovira)
total RNA. (breast)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040037(GSM532922)
G243T. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM416733(GSM416733)
HEK293. (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM339994(GSM339994)
hues6. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
...................................................................................................................................................................................................................TAGGGTAGTGGGAAAATA................................................................................................................................................................... 181.000.00---------------------------1.00----------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................TAGTGGGAAACTGGACACCC............................................................................................................................................................ 201.000.00----------------------------------------------------------------1.00---------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................ACCAAGCGCTCCAGGGTG.............. 181.000.00-------------------------------------1.00------------------------------------------------------------------------------------------------------
..............................................................................................................AAGCATTCGGAGAAGAC......................................................................................................................................................................................................................................................................... 1711.001.00-------------------------------------1.00------------------------------------------------------------------------------------------------------
........................................................................................................................AATGCTTATGAAAGTAAATG............................................................................................................................................................................................................................................................ 201.000.00-------------------------------------------------------------1.00------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................AACACTGTTCTCAGGTACATG........................................... 211.000.00-----------------------------------------------------------------------------------------------1.00--------------------------------------------
.............................................................................................................................................................................................................................................................................CCCTATTCAAAGTTAAGGGC....................................................................................................... 201.000.00---------------------------------------------1.00----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................ACCCTAGATTTAAGA............................................................................................................................................................................... 1550.200.20----------------------------------------------------0.20---------------------------------------------------------------------------------------