ID: uc001sbl.2_intron_17_0_chr12_53454043_f
GENE: (18)
chr12:53453993-53454238+


(3)
B-CELL 		(2)
BRAIN 		(9)
BREAST 		(20)
CELL-LINE 		(4)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(2)
HELA 		(5)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(40)
SKIN 		(1)
TESTES

Sense strand
GTACCCATTGCCTGGGCACCTGGCCTCAGCAGGACCTTTGGCATCTGCAGGTGAGGGGCACCAGAGTGCGGAGTGCCCAGGGCAGAGGAGGTTCTGGAAGATGGTGGGGAAGTCAAGGGGGAACAGGGTGAGAAACAGCTAAGCCAGACAGAAGAGCCCCATCCTGCTCACAGCCCACCTCTCCCCTTCACTGCAGAGTCGCTGGAGCCGGTGTCCTGGAGGGAGGGCCCCAGTGGGCACAGCACA
...................................................................................(((((.((..(((..((..(((((((...((.....((....((.((.....)).))...)).....))....)))))))...))..))).)).)))))................................................................
................................................................................81...................................................................................................182..............................................................
SizePerfect hitTotal NormPerfect NormSRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038863(GSM458546)
MM603. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR343334SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		TAX577580(Rovira)
total RNA. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040029(GSM532914)
G026T. (cervix)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR189785SRR040008(GSM532893)
G727N. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038860(GSM458543)
MM426. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038862(GSM458545)
MM472. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191436(GSM715546)
173genomic small RNA (size selected RNA from . (breast)		SRR040016(GSM532901)
G645N. (cervix)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577741(Rovira)
total RNA. (breast)		SRR029127(GSM416756)
A549. (cell line)		SRR191609(GSM715719)
194genomic small RNA (size selected RNA from . (breast)		SRR189786SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
...............................................................................................................................................................CATCCTGCTCACAGCGCCA....................................................................19120.000.0023.007.004.003.004.004.003.003.003.00-3.003.003.00--2.002.002.002.00-2.002.00-2.001.002.002.00--2.001.001.001.001.00-1.001.00---1.001.001.00-1.001.00--1.00--1.001.001.001.00-1.001.00-1.001.001.001.001.001.001.001.001.001.001.00-1.001.00-1.001.001.001.00-1.00-------------------
...............................................................................................................................................................CATCCTGCTCACAGCGCC.....................................................................1811.000.0010.00------------------------------------------1.00-------------------------------------------------------
...............................................................................................................................................................CATCCTGCTCACAGCGC......................................................................176.000.002.00--------3.00---------------------------1.00-------------------------------------------------------------
................................................................................................................................................................ATCCTGCTCACAGCCCCA....................................................................1864.830.17-0.33-0.50--0.33-------0.17----------------0.170.50--0.17--------------------------------------------0.670.33----0.170.170.17-0.170.170.170.170.17-0.170.17-
.....................................................................................AGGAGGTTCTGGAAGTTTT..............................................................................................................................................192.000.00----------------------------2.00----------------------------------------------------------------------
................................................................................................................................................................................................GCAGAGTCGCTGGAGCCGGTT.................................212.000.00----------------------2.00----------------------------------------------------------------------------
..............................................................................................................................................................................................CTGCAGAGTCGCTGGAGCCGGT..................................2211.001.00--1.00------------------------------------------------------------------------------------------------
.................................................................................................................................................................TCCTGCTCACAGCCCAAAT..................................................................191.000.00----------------------------------1.00----------------------------------------------------------------
..............................................................................................................................................................CCATCCTGCTCACAGCGCCA....................................................................201.000.001.00--------------------------------------------------------------------------------------------------
...........CTGGGCACCTGGCCTCAGC........................................................................................................................................................................................................................1921.001.00----------------------------------------------------------1.00----------------------------------------
.................................................................................................................................................................TCCTGCTCACAGCCCATT...................................................................181.000.00--------------------------------------------------1.00------------------------------------------------
............................................................................CCAGGGCAGAGGAGGTTCTGGAAGA.................................................................................................................................................2511.001.00-------------------------------------------------------1.00-------------------------------------------
...............................................................................................................................................................................................TGCAGAGTCGCTGGAGCCGG...................................2011.001.00-------------------1.00-------------------------------------------------------------------------------
.......................CCTCAGCAGGACCTTTGGCATCTGCAG....................................................................................................................................................................................................2711.001.00-------------------1.00-------------------------------------------------------------------------------
...............................................................................................................................................................................................TGCAGAGTCGCTGGAGCCGGTGG................................231.000.00---------------------------1.00-----------------------------------------------------------------------
...................................................................................................................................................................................................GAGTCGCTGGAGCCGGTGTCCT.............................2211.001.00---------------------------1.00-----------------------------------------------------------------------
.............................CAGGACCTTTGGCATCTGCAGAGTC................................................................................................................................................................................................251.000.00----------------------------------------------1.00----------------------------------------------------
....................TGGCCTCAGCAGGACCTTTGGCATA.........................................................................................................................................................................................................251.000.00----------------------------------------------------------------------1.00----------------------------
.........................................................................................................................................................................................CTTCACTGCAGAGTCGCTGGAGCCGGT..................................2711.001.00------------------------------1.00--------------------------------------------------------------------
................................GACCTTTGGCATCTGCA.....................................................................................................................................................................................................1711.001.00-------------------------------------------------------------------------1.00-------------------------
...................................................................................................................................................................................................................................CCCCAGTGGGCACAGGGAT191.000.00-------------------------------------------------1.00-------------------------------------------------
.................................................................................................AAGATGGTGGGGAAGTCAAGG................................................................................................................................2111.001.00------------------------------------------------------------------------------1.00--------------------
.......................CCTCAGCAGGACCTTTGGCATC.........................................................................................................................................................................................................2211.001.00--------------------------------------1.00------------------------------------------------------------
....................................................................CGGAGTGCCCAGGGCAGAGGAGGTTCTGG.....................................................................................................................................................2911.001.00-----------------------------------------------1.00---------------------------------------------------
................................................................................................................................................................ATCCTGCTCACAGCCCCAAA..................................................................2060.830.17---0.67-------------------------------------------------------------------------------------------0.17---
.................................ACCTTTGGCATCTGCAG....................................................................................................................................................................................................1730.670.67---------------------------------0.33-------------------------------------------------0.33---------------
................................................................................................................................................................ATCCTGCTCACAGCCCA.....................................................................1730.330.33-------------------------------0.33-------------------------------------------------------------------
................................................................................................................................................................ATCCTGCTCACAGCCCCAA...................................................................1960.330.17-----------------------------------------------------------------------------------------0.17--------0.17
.........................................................................TGCCCAGGGCAGAGGAGGTT.........................................................................................................................................................2050.200.20-------------------------------------------------------------------------------------0.20-------------
................................................................................................................................................................ATCCTGCTCACAGCCC......................................................................1660.170.17----------------------------------0.17----------------------------------------------------------------
................................................................................................................................................................ATCCTGCTCACAGCCCCATT..................................................................2060.170.17------------------------------------0.17--------------------------------------------------------------
................................................................................................................................................................ATCCTGCTCACAGCCCCC....................................................................1860.170.17---------------------------------------------------------------------------------0.17-----------------
................................................................................................................................................................ATCCTGCTCACAGCCCTAT...................................................................1960.170.17----------------------------------0.17----------------------------------------------------------------

Antisense strand
GTACCCATTGCCTGGGCACCTGGCCTCAGCAGGACCTTTGGCATCTGCAGGTGAGGGGCACCAGAGTGCGGAGTGCCCAGGGCAGAGGAGGTTCTGGAAGATGGTGGGGAAGTCAAGGGGGAACAGGGTGAGAAACAGCTAAGCCAGACAGAAGAGCCCCATCCTGCTCACAGCCCACCTCTCCCCTTCACTGCAGAGTCGCTGGAGCCGGTGTCCTGGAGGGAGGGCCCCAGTGGGCACAGCACA
...................................................................................(((((.((..(((..((..(((((((...((.....((....((.((.....)).))...)).....))....)))))))...))..))).)).)))))................................................................
................................................................................81...................................................................................................182..............................................................
SizePerfect hitTotal NormPerfect NormSRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038863(GSM458546)
MM603. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR343334SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR029124(GSM416753)
HeLa. (hela)		TAX577580(Rovira)
total RNA. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040029(GSM532914)
G026T. (cervix)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR189785SRR040008(GSM532893)
G727N. (cervix)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038860(GSM458543)
MM426. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577738(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038862(GSM458545)
MM472. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191436(GSM715546)
173genomic small RNA (size selected RNA from . (breast)		SRR040016(GSM532901)
G645N. (cervix)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577741(Rovira)
total RNA. (breast)		SRR029127(GSM416756)
A549. (cell line)		SRR191609(GSM715719)
194genomic small RNA (size selected RNA from . (breast)		SRR189786SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
............................................................................................................................................................................GCCCACCTCTCCCCTGGAG....................................................... 192.000.00-------------2.00-------------------------------------------------------------------------------------
...........................................................................CCCAGGGCAGAGGAGGG.......................................................................................................................................................... 171.000.00------------------------1.00--------------------------------------------------------------------------
................................................................................................................................................................................................CGGCTCCAGCGACTCTGC.................................... 1811.001.00--------------1.00------------------------------------------------------------------------------------
....................................................................................................................................................................TGCTCACAGCCCACCCTGA............................................................... 191.000.00-------------1.00-------------------------------------------------------------------------------------
.............................................................GGGCACTCCGCACTCTG........................................................................................................................................................................ 1711.001.00---------------------------------------1.00-----------------------------------------------------------
.................................................................................................................................................................................................CTCCCTCCAGGACACCGGCTCCAGCGACTCTG..................... 3211.001.00--------------1.00------------------------------------------------------------------------------------
...............................................................................................................................................................TGGGCTGTGAGCAGGATG..................................................................... 1820.500.50----------------------------------------------------------------------------------0.50----------------
...............................................................................................CTTCCCCACCATCTTCC...................................................................................................................................... 1740.250.25------------------------------------------------------------------------------------0.25--------------