ID: uc001sar.2_intron_4_0_chr12_52984746_r.3p
GENE: KRT72(5)
chr12:52984696-52984945-


(1)
AGO2.ip
(2)
B-CELL
(3)
BREAST
(4)
CELL-LINE
(2)
LIVER
(39)
SKIN
(1)
TESTES

Sense strand
ATTCACATATATTGTCTTATCTTCATGTTTCCACTTTGGCAAAATGAGGATAGGAAATTCACACTCTGCCAAGGCTCTCATGTTTGAGAACCTGAGGATCTTGTTGAACTAGGGCAGGATCCTTTCTGTCCAGAAGAAAAGGGACCTGCCCTAGTTCAGTAGGATCCTTGTGTTCCTCTTCTCTTGTCACCCAACCTCAGATCCAGGAGCTGCAGGTCACAGCAGGCCAGCATGGGGATGACCTCAAGCT
................................................................................................................((((((.((((((((.......))))).))).))))))....................................................................................................
...............................................................................................96....................................................150..................................................................................................
SizePerfect hitTotal NormPerfect NormSRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
TAX577740(Rovira)
total RNA. (breast)
SRR038854(GSM458537)
MM653. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
....................................................................................................TTGTTGAACTAGGGCAGGATC.................................................................................................................................21152.0052.0018.008.005.004.003.00-3.001.00---2.00-------1.00-1.001.002.001.00-------1.00--------1.00---------
....................................................................................................TTGTTGAACTAGGGCAGGATCC................................................................................................................................22140.0040.0010.001.003.001.005.004.00--2.00--2.001.001.002.001.002.002.001.00--1.00-----1.00-----------------------
....................................................................................................TTGTTGAACTAGGGCAGGATT.................................................................................................................................21110.003.00-5.00-1.00---2.00----2.00--------------------------------------
....................................................................................................TTGTTGAACTAGGGCAGGATCCTT..............................................................................................................................2418.008.00-1.003.002.00---1.00----------------------------1.00--------------
....................................................................................................TTGTTGAACTAGGGC.......................................................................................................................................1517.007.001.00-1.00-1.003.00-1.00-------------------------------------------
....................................................................................................TTGTTGAACTAGGGCAGGATCCAT..............................................................................................................................2417.0040.002.00--------1.002.00----------------------1.001.00----------------
...................................................................................TTGAGAACCTGAGGATC......................................................................................................................................................1716.006.00--------2.001.00----------2.00--------1.00---------------------
....................................................................................................TTGTTGAACTAGGGCAGGATCCT...............................................................................................................................2315.005.002.00--1.00-----------1.00-----------1.00-----------------------
..................................................................................TTTGAGAACCTGAGGATC......................................................................................................................................................1815.005.00--1.00---1.00---------------1.00----------------1.00-----1.00-----
....................................................................................................TTGTTGAACTAGGGCAGGATCA................................................................................................................................2214.0052.001.00--1.00--1.00---------1.00----------------------------------
....................................................................................................TTGTTGAACTAGGGCAGGATCT................................................................................................................................2213.0052.00-------------------------2.00------------1.00------------
....................................................................................................TTGTTGAACTAGGGCAGGAT..................................................................................................................................2013.003.00-1.00-------------1.00--1.00--------------------------------
....................................................................................................TTGTTGAACTAGGGCAGGA...................................................................................................................................1912.002.00------1.00------------------------1.00-------------------
.....................................................................................................TGTTGAACTAGGGCAGGATC.................................................................................................................................2012.002.00-2.00-------------------------------------------------
.....................................................................................................TGTTGAACTAGGGCAGGAT..................................................................................................................................1912.002.001.00-----------------------1.00--------------------------
...............................................................................................................................GTCCAGAAGAAAAGGCCCA........................................................................................................192.000.00--------------------------2.00------------------------
....................................................................................................TTGTTGAACTAGGGCAGGATCCTTTTT...........................................................................................................................272.000.00---------2.00-----------------------------------------
............................................................................................................................................................................................ACCCAACCTCAGATCAGAC...........................................191.000.00-------------------------------------1.00-------------
....................................................................................................TTGTTGAACTAGGGCAGGATCCCT..............................................................................................................................2411.0040.00-----------------1.00---------------------------------
.....................................................................................................TGTTGAACTAGGGCAGGATCCT...............................................................................................................................2211.001.00--------------1.00------------------------------------
................................................................................TGTTTGAGAACCTGAGGATC......................................................................................................................................................2011.001.001.00--------------------------------------------------
.....................................................................................................TGTTGAACTAGGGCAGGATCCTTC.............................................................................................................................241.000.00--------------------------------------------1.00------
........................................................................................................TGAACTAGGGCAGGATCCTTT.............................................................................................................................2111.001.00------------------------------1.00--------------------
...........................................................................................................................................AGGGACCTGCCCTAGTTCAGTAG........................................................................................2311.001.00----------1.00----------------------------------------
....................................................................................................TTGTTGAACTAGGGCAGGATCCA...............................................................................................................................2311.0040.00-------------1.00-------------------------------------
................................................................................................GATCTTGTTGAACTAGCT........................................................................................................................................181.000.00-----------------------------------1.00---------------
....................................................................................................TTGTTGAACTAGGGCAGGATCCTTAAT...........................................................................................................................2711.008.00-------------1.00-------------------------------------
...............CTTATCTTCATGTTTCATT........................................................................................................................................................................................................................191.000.00----------------------------------------------1.00----
........................................................................................................TGAACTAGGGCAGGATC.................................................................................................................................1711.001.00----------1.00----------------------------------------
.................................................................................GTTTGAGAACCTGAGGATC......................................................................................................................................................1911.001.00---1.00-----------------------------------------------
.....................................................................................................TGTTGAACTAGGGCAGGATT.................................................................................................................................2011.002.00----------------------------------------1.00----------
............................................................................................................................................................................................................AGGAGCTGCAGGTCACAGCAGGCGG.....................251.000.00-------------------1.00-------------------------------
.......................................................................................................TTGAACTAGGGCAGGATT.................................................................................................................................181.000.00------------------------------------------1.00--------
.............................................................................................................................................................................................................GGAGCTGCAGGTCACAGC...........................1850.400.40-----------------------------------------------0.200.20--
............................................................................................................................................................................................................AGGAGCTGCAGGTCACAGCAG.........................2130.330.33------------0.33--------------------------------------
............................................................................................................................................................................................................AGGAGCTGCAGGTCACAGC...........................1930.330.33------------------0.33--------------------------------
............................................................................................................................................................................................................AGGAGCTGCAGGTCAC..............................1660.170.17--------------------------------------------------0.17
........................................................................................................TGAACTAGGGCAGGA...................................................................................................................................1560.170.17-------------------------------------------------0.17-
........................................................................................................................................................................................................ATCCAGGAGCTGCAGG..................................1660.170.17-------------0.17-------------------------------------

Antisense strand
ATTCACATATATTGTCTTATCTTCATGTTTCCACTTTGGCAAAATGAGGATAGGAAATTCACACTCTGCCAAGGCTCTCATGTTTGAGAACCTGAGGATCTTGTTGAACTAGGGCAGGATCCTTTCTGTCCAGAAGAAAAGGGACCTGCCCTAGTTCAGTAGGATCCTTGTGTTCCTCTTCTCTTGTCACCCAACCTCAGATCCAGGAGCTGCAGGTCACAGCAGGCCAGCATGGGGATGACCTCAAGCT
................................................................................................................((((((.((((((((.......))))).))).))))))....................................................................................................
...............................................................................................96....................................................150..................................................................................................
SizePerfect hitTotal NormPerfect NormSRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
TAX577740(Rovira)
total RNA. (breast)
SRR038854(GSM458537)
MM653. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.................................................................................................................................................................................................................CTGCAGGTCACAGCAGCC....................... 181.000.00-------------------------------------------1.00-------
.......................................................................................................................TCCTTTCTGTCCAGAATT................................................................................................................. 181.000.00----------------------------1.00----------------------
...............................................................................................................................................TGAACTAGGGCAGGT............................................................................................ 1570.140.14-----------------------------------------------0.14---