ID: uc001ryk.2_intron_4_0_chr12_51753117_r.5p
GENE: GALNT6(6)
chr12:51754305-51754554-


(14)
BRAIN 		(5)
CELL-LINE 		(2)
LIVER 		(1)
OTHER 		(2)
SKIN 		(1)
UTERUS

Sense strand
ATAATCAGATGGAGATCTGGGGAGGGGAGAACGTGGAAATGTCCTTCCGGGTGAGAGTGAAGAGGGCTTTGGGGGGAACCACAACATCCCAGGCGACAGCTTGAGAAACATCTCTCAGGCAGAGGTGGCATCAGGGACATCCCATCTGGAACTGAACTAGAAAGGGTGGCTATTTCCCAGTGTGTCTCTTCCTCTTTTCTGCTCCCCCTGTCCATGGCAGTAGGGCTTGGGCAGTCAGCCTGGACAGCTC
...............................................................(((..(((.((....)).)))...)))..((.((.((((((((......))))))))....)).))....(((....)))...........................................................................................................
..................................................51.............................................................................................146......................................................................................................
SizePerfect hitTotal NormPerfect NormGSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189787SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038854(GSM458537)
MM653. (cell line)
...................................................TGAGAGTGAAGAGGGCTTTTT..................................................................................................................................................................................21118.001.002.002.003.00-1.001.003.00---1.002.001.00-1.00-1.00----------
...................................................TGAGAGTGAAGAGGGCTTTGT..................................................................................................................................................................................2112.000.002.00--2.002.00-2.00-1.00-2.00-1.00--------------
...................................................TGAGAGTGAAGAGGGCTTTTTT.................................................................................................................................................................................2219.001.002.002.001.001.001.002.00---------------------
...................................................TGAGAGTGAAGAGGGCTCTTT..................................................................................................................................................................................2128.000.502.500.501.00--1.00--0.501.50--0.50---0.50----------
...................................................TGAGAGTGAAGAGGGCTTTGTT.................................................................................................................................................................................226.000.00-2.00-2.00----1.001.00-----------------
.................TGGGGAGGGGAGAACTCTG......................................................................................................................................................................................................................193.000.00-------3.00-------------------
...................................................TGAGAGTGAAGAGGGCTTTTAT.................................................................................................................................................................................2212.001.00----1.00------1.00---------------
...................................................TGAGAGTGAAGAGGGCTTATTT.................................................................................................................................................................................222.000.00--1.00------1.00-----------------
...................................................TGAGAGTGAAGAGGGCTCTGT..................................................................................................................................................................................2122.000.500.50-------0.500.500.50----------------
...................................................TGAGAGTGAAGAGGGCTTAGT..................................................................................................................................................................................212.000.00---1.00----1.00------------------
...................................................TGAGAGTGAAGAGGGCTTAT...................................................................................................................................................................................201.000.00-----1.00---------------------
............................................................................................................................GTGGCATCAGGGACAATAT...........................................................................................................191.000.00-----------------1.00---------
...................................................TGAGAGTGAAGAGGGCTTTTTC.................................................................................................................................................................................2211.001.00-----1.00---------------------
...................................................TGAGAGTGAAGAGGGCTTTTTTA................................................................................................................................................................................2311.001.00-------------------1.00-------
...............................................................................................................................................ATCTGGAACTGAACTAGAAAGGGTGGCT...............................................................................2811.001.00------------------------1.00--
..................................................................................AACATCCCAGGCGACGGC......................................................................................................................................................181.000.00-------------1.00-------------
...................................................TGAGAGTGAAGAGGGCTTTGTTT................................................................................................................................................................................231.000.00---1.00-----------------------
................CTGGGGAGGGGAGAACTCTG......................................................................................................................................................................................................................201.000.00-------1.00-------------------
...............................................................................................................................................ATCTGGAACTGAACTAGAAAGGGT...................................................................................2411.001.00-------1.00-------------------
...................................................TGAGAGTGAAGAGGGCTTTTTGT................................................................................................................................................................................2311.001.00------------------1.00--------
...................................................TGAGAGTGAAGAGGGCTCTG...................................................................................................................................................................................2021.000.50--0.50------0.50-----------------
...................................................TGAGAGTGAAGAGGGCATAG...................................................................................................................................................................................201.000.00--------------1.00------------
...................................................TGAGAGTGAAGAGGGCTCAGT..................................................................................................................................................................................2121.000.50----0.50-----0.50----------------
...................................................TGAGAGTGAAGAGGGCTTAGTT.................................................................................................................................................................................221.000.00-1.00-------------------------
..............................................................................................................TCTCTCAGGCAGAGGTGGC.........................................................................................................................1911.001.00--------------------1.00------
...................................................TGAGAGTGAAGAGGGCTTTTTTT................................................................................................................................................................................2311.001.00-1.00-------------------------
...................................................TGAGAGTGAAGAGGGCTTT....................................................................................................................................................................................1911.001.00--1.00------------------------
...................................................TGAGAGTGAAGAGGGCTTTGTTTT...............................................................................................................................................................................241.000.00-1.00-------------------------
...................................................TGAGAGTGAAGAGGGCTTTGTA.................................................................................................................................................................................221.000.001.00--------------------------
............................................................AGAGGGCTTTGGGGGGCAGG..........................................................................................................................................................................201.000.00-----------------------1.00---
...................................................TGAGAGTGAAGAGGGCTTATT..................................................................................................................................................................................211.000.00-1.00-------------------------
.........TGGAGATCTGGGGAGGGGA..............................................................................................................................................................................................................................1920.500.50--------------------------0.50
...................................................TGAGAGTGAAGAGGGCT......................................................................................................................................................................................1720.500.50--------0.50------------------
...................................................TGAGAGTGAAGAGGGCTGTTT..................................................................................................................................................................................2120.500.50--0.50------------------------
...................................................TGAGAGTGAAGAGGGCTATTT..................................................................................................................................................................................2120.500.50------0.50--------------------
...................................................TGAGAGTGAAGAGGGCTCTGA..................................................................................................................................................................................2120.500.50----0.50----------------------

Antisense strand
ATAATCAGATGGAGATCTGGGGAGGGGAGAACGTGGAAATGTCCTTCCGGGTGAGAGTGAAGAGGGCTTTGGGGGGAACCACAACATCCCAGGCGACAGCTTGAGAAACATCTCTCAGGCAGAGGTGGCATCAGGGACATCCCATCTGGAACTGAACTAGAAAGGGTGGCTATTTCCCAGTGTGTCTCTTCCTCTTTTCTGCTCCCCCTGTCCATGGCAGTAGGGCTTGGGCAGTCAGCCTGGACAGCTC
...............................................................(((..(((.((....)).)))...)))..((.((.((((((((......))))))))....)).))....(((....)))...........................................................................................................
..................................................51.............................................................................................146......................................................................................................
SizePerfect hitTotal NormPerfect NormGSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189787SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038854(GSM458537)
MM653. (cell line)
........................................GTCCTTCCGGGTGAGAT................................................................................................................................................................................................. 172.000.00---------------1.00-----1.00-----
....................................................GAGAGTGAAGAGGGCTTTGGGGTC.............................................................................................................................................................................. 241.000.00----------------------1.00----
........................................................................................CCAGGCGACAGCTTGAGAA............................................................................................................................................... 191.000.00---------------1.00-----------
.................................................................................................................................................................................................................................CTTGGGCAGTCAGCCTAGT...... 191.000.00-------------1.00-------------
.......................................................................................................................................................................................................TGCTCCCCCTGTCCATA.................................. 171.000.001.00--------------------------
.......................................................AGTGAAGAGGGCTTTGGAGG............................................................................................................................................................................... 201.000.00-------------------------1.00-