ID: uc001rjc.1_intron_11_0_chr12_29921009_r.3p
GENE: TMTC1(1)
chr12:29920959-29921208-


(2)
BREAST
(7)
CELL-LINE
(6)
HEART
(2)
SKIN
(2)
UTERUS

Sense strand
TTTCTGCACATGGGACAATTCTGAAATAGGAAAAATGTGATACATACCCAAGGCTAAAAAATAACCCAATGTTGGGAATCATTTAAAAATCATTAATCTAATAGCTTATCTTTTTAAATGATGGATTCCGTCTGTGTTCCTTGTGTTTATGTTGAGTTTGTAGCTAATGCAGTTTTTTTCTTTTTTCTTTTGTTTTACAGGCTAAACATATTTTTGACTGGTATGAACCCATTCTACTTTCATGCAGTAA
............................................................................................................................................(((((((...((((......)))).)))))))..............................................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
................................................................................................................................................................................TTTCTTTTTTCTTTTGTTTTGGTT..................................................244.000.003.001.00-----------------
...........................................................................................................................................................................GTTTTTTTCTTTTTTCGAGG...........................................................204.000.004.00------------------
...............................................................................................................................................................................TTTTCTTTTTTCTTTTGTTTTGG....................................................233.000.003.00------------------
............................................................................................................................................................................TTTTTTTCTTTTTTCTTTTGTTTTTTG...................................................272.000.00-2.00-----------------
............................................................................................................................................................................TTTTTTTCTTTTTTCTTTTGTAGG......................................................242.000.001.001.00-----------------
..............................................................................................................................................................................TTTTTCTTTTTTCTTTTGTACAG.....................................................232.000.00-2.00-----------------
...........................................................................................................................................................................................TTTTGTTTTACAGGCGTTG............................................192.000.00----2.00--------------
................................................................................................................................................................................TTTCTTTTTTCTTTTGTTTTACAGAA................................................262.000.00-----2.00-------------
.............................................................................................................................................................................................................ACATATTTTTGACTGGTATGAA.......................2212.002.00---2.00---------------
.............................................................................................................................................................................TTTTTTCTTTTTTCTTTTGTTTTGGT...................................................262.000.00-2.00-----------------
...................................................................................................................................................................................................................TTTTGACTGGTATGAACCCA...................2012.002.00------2.00------------
.............................................................................................................................................................................TTTTTTCTTTTTTCTTTTGTTTTCCC...................................................261.000.001.00------------------
.............................................................................................................................................................................TTTTTTCTTTTTTCTTTTGTTTTTGG...................................................261.000.00-1.00-----------------
.............................................................................................................................................................................TTTTTTCTTTTTTCTTTTGCG........................................................211.000.001.00------------------
................................................................................................................................................................................................................TATTTTTGACTGGTATGAACCCATTC................2611.001.00--------1.00----------
...........................................................................................................................................................................GTTTTTTTCTTTTTTCTTTTGGTA.......................................................241.000.00-1.00-----------------
..................................................................................................................................................................................TCTTTTTTCTTTTGTTTTTGGG..................................................221.000.001.00------------------
.............................................................................................................................................................................TTTTTTCTTTTTTCTTTTGGTC.......................................................221.000.001.00------------------
...........................................................................................................................................................................................................AAACATATTTTTGACTGGTATGAACCCA...................2811.001.00---------1.00---------
............................................................................................................................................................................TTTTTTTCTTTTTTCTTTTGGTC.......................................................231.000.001.00------------------
..............................................................................................................................................................................TTTTTCTTTTTTCTTTTGGCCC......................................................221.000.001.00------------------
............................................................................................................................................................................TTTTTTTCTTTTTTCTTTTGTTTCACA...................................................271.000.001.00------------------
...............................................................................................................................................................................TTTTCTTTTTTCTTTTGTTTTACGTCG................................................271.000.00------------------1.00
.........................................ACATACCCAAGGCTAACCTC.............................................................................................................................................................................................201.000.00------------1.00------
.............................................................................................................................................................................TTTTTTCTTTTTTCTTTTGTTTTTCG...................................................261.000.001.00------------------
..................................................................................................................................................................................................................TTTTTGACTGGTATGAACCCATTCTA..............2611.001.00--------------1.00----
..........................................................................................................................................................................AGTTTTTTTCTTTTTTCGG.............................................................191.000.001.00------------------
.............................................................................................................................................................................TTTTTTCTTTTTTCTTTTGTTTTTTG...................................................261.000.001.00------------------
................................................................................................................................................................................TTTCTTTTTTCTTTTGGGTG......................................................201.000.00-1.00-----------------
............................................................................................................................................................................TTTTTTTCTTTTTTCTTTTGTTGGC.....................................................251.000.001.00------------------
..........................................................................................................................................................................AGTTTTTTTCTTTTTTCTAG............................................................201.000.00-------1.00-----------
..................................................................................................................................................................................................................TTTTTGACTGGTATGAACC.....................1911.001.00--1.00----------------
..............................................................................................................................................................................TTTTTCTTTTTTCTTTTGTTTTTCTC..................................................261.000.00-1.00-----------------
.................................................................................................................................................................................TTCTTTTTTCTTTTGTTTTGGG...................................................221.000.00-1.00-----------------
.............................................................................................................................................................................TTTTTTCTTTTTTCTTTTGTTTTCGAG..................................................271.000.00-1.00-----------------
..............................................................................................................................................................................TTTTTCTTTTTTCTTTTGGCTT......................................................221.000.00-1.00-----------------
..........................................................................................................................................................................AGTTTTTTTCTTTTTTCTGGG...........................................................211.000.001.00------------------
................................................................................................................................................GTTTATGTTGAGTTTCAGG.......................................................................................191.000.001.00------------------
.............................................................................................................................TTCCGTCTGTGTTCCTT............................................................................................................1711.001.00----------------1.00--
.......ACATGGGACAATTCTGAAAT...............................................................................................................................................................................................................................2011.001.00-------------1.00-----
......................................................................................................................................................................ATGCAGTTTTTTTCTTTTTGGTC.............................................................231.000.001.00------------------
..........................................................................................................................................................................AGTTTTTTTCTTTTTTCTTTAACT........................................................241.000.001.00------------------
..........................................................................................................................................................................AGTTTTTTTCTTTTTTCTTTTCGGC.......................................................251.000.001.00------------------
..............................................................................................................................................................................TTTTTCTTTTTTCTTTTGTTTTCC....................................................241.000.00-1.00-----------------
............................................................................................................................................................................TTTTTTTCTTTTTTCTTTTGGAC.......................................................231.000.001.00------------------
..............................................................................................................................................................................TTTTTCTTTTTTCTTTTGTTTTGG....................................................241.000.001.00------------------
.............................................................................................................................................................................................................ACATATTTTTGACTGGTATG.........................2011.001.00---------------1.00---
............................................................................................................................................................................TTTTTTTCTTTTTTCTTTTGGCA.......................................................231.000.001.00------------------
.....................................................................................................................................................................................................................TTGACTGGTATGAAC......................1511.001.00-----------1.00-------
..............................................................................................................................................................................TTTTTCTTTTTTCTTTTGTTTCTCT...................................................251.000.00-1.00-----------------
................................................................................................................................................................................................................TATTTTTGACTGGTATGAACC.....................2111.001.00--1.00----------------
................................................................................................................................................................................TTTCTTTTTTCTTTTGTTTTGGT...................................................231.000.001.00------------------
..........................................................................................................................................................................AGTTTTTTTCTTTTTTCTTTTAAGC.......................................................251.000.001.00------------------

Antisense strand
TTTCTGCACATGGGACAATTCTGAAATAGGAAAAATGTGATACATACCCAAGGCTAAAAAATAACCCAATGTTGGGAATCATTTAAAAATCATTAATCTAATAGCTTATCTTTTTAAATGATGGATTCCGTCTGTGTTCCTTGTGTTTATGTTGAGTTTGTAGCTAATGCAGTTTTTTTCTTTTTTCTTTTGTTTTACAGGCTAAACATATTTTTGACTGGTATGAACCCATTCTACTTTCATGCAGTAA
............................................................................................................................................(((((((...((((......)))).)))))))..............................................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.....................TGAAATAGGAAAAATTTG................................................................................................................................................................................................................... 181.000.00-----------------1.00-
...............................................................................CATTTAAAAATCATTAACTC....................................................................................................................................................... 201.000.00-------1.00-----------
.....................................................................................................................................................................................................................................CATTCTACTTTCATGCACT.. 191.000.00----------1.00--------