ID: uc001rft.2_intron_1_0_chr12_22796957_f.3p
GENE: (2)
chr12:22811748-22811997+


(4)
CELL-LINE
(2)
CERVIX
(1)
HEART
(2)
LIVER
(1)
OTHER
(3)
SKIN

Sense strand
TCAGATATCAAGGGTGGGGATACTCTTGCTAAACTGACTCAGTAGGGTTCTTGCTAAAACTGGTTTTTACAAGAGAGAGCACAGGTAGGTCTACAAGAAGATTCGGGAGACTGACTAAAGTTTCATCAAGAATCTTTGTCAGGAGACATGACCTTTATGATACTTAAGTTTTTCTTTTTATGCGGTTTTGTTTTAAACAGGCTAATAGCTCGTCAGCTTGCTAAAATCCATGCTATTCATGCACACAATG
........................................................................................((((....((((((((..((((((......)))))).....))))))))......)))).......................................................................................................
........................................................................................89..................................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189782SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189784SRR040040(GSM532925)
G612N. (cervix)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM532890(GSM532890)
G576T. (cervix)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343335SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.............................................................................................CAAGAAGATTCGGGAGACTG.........................................................................................................................................2018.008.00--8.00-------------
......................................................................................................................................................................AGTTTTTCTTTTTATGCGGTTTTGTTTC........................................................288.000.005.003.00--------------
......................................................................................................................................................................AGTTTTTCTTTTTATGCGGTTTTGTTC.........................................................274.000.002.002.00--------------
......................................................................................................................................................................AGTTTTTCTTTTTATGCGGTTTTGTC..........................................................2613.001.001.002.00--------------
.....................................................................................................................................................................AAGTTTTTCTTTTTATGCGGTTTTGTTTC........................................................293.000.002.001.00--------------
........................................................................................................................................................................TTTTTCTTTTTATGCGGTTTTGTTTC........................................................262.000.002.00---------------
......................................................................................................................................................ACCTTTATGATACTTGAAA.................................................................................192.000.00-----2.00----------
......................................................................................................................................................................AGTTTTTCTTTTTATGCGGTTTTGTTTCA.......................................................292.000.002.00---------------
.....................................................................................................................................................................AAGTTTTTCTTTTTATGCGGTTTTGTTC.........................................................282.000.002.00---------------
.............................................................................................CAAGAAGATTCGGGAGACTGTAAC.....................................................................................................................................2412.008.00----2.00-----------
......................................................................................................................................................................AGTTTTTCTTTTTATGCGGTTTTGCT..........................................................262.000.002.00---------------
.............................................................................................CAAGAAGATTCGGGAGACTGACTAAAG..................................................................................................................................2711.001.00------------1.00---
......................................................................................................................................................................AGTTTTTCTTTTTATGCGGTTTTGTTCC........................................................281.000.001.00---------------
......................................................................................................................................................................AGTTTTTCTTTTTATGCGGTTTTGT...........................................................2511.001.001.00---------------
...............................................................................................................................................................................................TTTAAACAGGCTAATATCT........................................191.000.00---1.00------------
......................................................................................................................................................................AGTTTTTCTTTTTATGCCAC................................................................201.000.00------1.00---------
...............................................................................................................................................................ATACTTAAGTTTTTCTTTTTATGCGG.................................................................2611.001.00-1.00--------------
........................................................................................................................................TGTCAGGAGACATGACCTTCATG...........................................................................................231.000.00-1.00--------------
.....................................................................................................................................................................AAGTTTTTCTTTTTATGCGGTTTTGCTTT........................................................291.000.001.00---------------
............................................................................................ACAAGAAGATTCGGGAGACTGACTAAAGTTTG..............................................................................................................................321.000.00----------1.00-----
...............................................................................................AGAAGATTCGGGAGACTGACTAAAG..................................................................................................................................2511.001.00----1.00-----------
...............................................................................................................................................................................................TTTAAACAGGCTAATATTT........................................191.000.00---1.00------------
.................................................................................................AAGATTCGGGAGACTGACAA.....................................................................................................................................201.000.00-1.00--------------
..................................................................TTACAAGAGAGAGCACAGG.....................................................................................................................................................................1911.001.00-1.00--------------
..........................................................................................................................................................................TTTCTTTTTATGCGGTTTTGTTTC........................................................241.000.001.00---------------
...............................................................................................AGAAGATTCGGGAGACTGACTAAAGTT................................................................................................................................2711.001.00----1.00-----------
.......................................................................AGAGAGAGCACAGGTAGGTCCACA...........................................................................................................................................................241.000.00-1.00--------------
.................................................................................................................................................................................TTATGCGGTTTTGTTTT........................................................1711.001.00--------1.00-------
...............................................................................................................................................................................................TTTAAACAGGCTAATATCGG.......................................201.000.00---1.00------------
...............................................................................................AGAAGATTCGGGAGACTGA........................................................................................................................................1911.001.00---------1.00------
.......................................................................AGAGAGAGCACAGGTAG..................................................................................................................................................................1711.001.00-----------1.00----
...............................................................................................................................................................................................TTTAAACAGGCTAATATCG........................................191.000.00---1.00------------
......................................................................................................................................................................AGTTTTTCTTTTTATGCGGTTTTGTCC.........................................................2711.001.001.00---------------
.........................................................................AGAGAGCACAGGTAGGTCTACAAGAAGA.....................................................................................................................................................2811.001.001.00---------------
......................................................................................................................................................................AGTTTTTCTTTTTATGCGGTTTCGT...........................................................251.000.001.00---------------
.............................................................................................................................................................................................................................TAAAATCCATGCTATTCATGCACACAAT.2811.001.00-------------1.00--
..............................AAACTGACTCAGTAGG............................................................................................................................................................................................................1630.330.33---------------0.33

Antisense strand
TCAGATATCAAGGGTGGGGATACTCTTGCTAAACTGACTCAGTAGGGTTCTTGCTAAAACTGGTTTTTACAAGAGAGAGCACAGGTAGGTCTACAAGAAGATTCGGGAGACTGACTAAAGTTTCATCAAGAATCTTTGTCAGGAGACATGACCTTTATGATACTTAAGTTTTTCTTTTTATGCGGTTTTGTTTTAAACAGGCTAATAGCTCGTCAGCTTGCTAAAATCCATGCTATTCATGCACACAATG
........................................................................................((((....((((((((..((((((......)))))).....))))))))......)))).......................................................................................................
........................................................................................89..................................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189782SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189784SRR040040(GSM532925)
G612N. (cervix)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM532890(GSM532890)
G576T. (cervix)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343335SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.................................................................................CAGGTAGGTCTACAACG........................................................................................................................................................ 171.000.00-------1.00--------
...............................................................................................................................................................................................................................AAATCCATGCTATTCAGG......... 181.000.00--------------1.00-