ID: uc001rfk.2_intron_5_0_chr12_22093760_r
GENE: (1)
chr12:22093710-22094183-


(5)
CELL-LINE
(1)
CERVIX
(4)
HEART
(2)
LIVER
(2)
OTHER
(7)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
CGTTCCGGCGCACTGCGTGCTTCGCCTAGGGGAGGAAAACTGTCATCGGAGTAAGTGAATCCGTGTCTTTTACATGAATGCCATTTAAACATTTTTAGGAATAACTGTAAGTTGTCGATTTTGAGCTAACATTTCTGCTATCCAAAAACGCCCTCGCACTCTCTCGCACTTCTCGGCACTTAGCTTTCGCGATCGCTATTTCTAGAATTAAGGGACGAGGCCCGGCTCGAGAAGTGAAGGGGTGGGGATCAGGTTTCCAGTTTTACTTCAAAACTGCCGTCTCCTACTCAAATCAACTGGAAACAGTGAAAGGAGTTATTATTATTAGGAGTTATTATTACCGCCTTTCTTGTAGACAATTCTTGTATGTTCAAGAAGTAGTTTTCTATCTGCTTAATTTTTGTTACTCTTTACTTTTTTTTAGGAGTTCTGCGTCCGGGTTTGAAATTTACATCTTAAGACAGTGTAGGAAGT
......................................................................................................................................................................................................................................................................................................................................((((((..............((((((...(((.....))).....))))))((((........))))............))))))...............................................................
....................................................................................................................................................................................................................................................................................................................................325................................................................................................424................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR553576(SRX182782)
source: Testis. (testes)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040027(GSM532912)
G220T. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTTTACTTTTTTTTTTTG................................................2131.000.0017.007.006.001.00-------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTTTACTTTTTTTTTG..................................................1914.000.008.002.001.003.00-------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAATTTACATCTTAAGACAGTGTAGG....2813.003.00----3.00------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTTACTTTTTTTTTTTG................................................202.000.001.00-1.00--------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTTTACTTTTTTTTTTCG................................................212.000.001.001.00---------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCTGCGTCCGGGTTTG..............................2011.001.00------------------1.00----
........................................................................................................................................................................................................TCTAGAATTAAGGGACCT................................................................................................................................................................................................................................................................181.000.00-----------------1.00-----
.............................................................................................................................................................................................................AATTAAGGGACGAGG..............................................................................................................................................................................................................................................................1511.001.00------------1.00----------
..............................GGAGGAAAACTGTCATCGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--------------1.00--------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGACAGTGTAGGAAGT1811.001.00--------1.00--------------
.....................TCGCCTAGGGGAGGAAAACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-------------------1.00---
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGAGTTCTGCGTCCGG...................................1811.001.00----------------1.00------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAATTTACATCTTAAGACAGTG........2611.001.00-------1.00---------------
......................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTTACTTTTTTTTATTT................................................201.000.00---1.00-------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTTTACTTTTTTTTGT..................................................191.000.001.00----------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAGGAGTTCTGCGGTT.....................................191.000.00---------------1.00-------
........................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCTGCGTCCGGGATA...............................191.000.00------1.00----------------
....................................AAACTGTCATCGGAGTAAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00----1.00------------------
.................................................................................................................................................................................................................................CTCGAGAAGTGAAGGGGTGG.....................................................................................................................................................................................................................................2011.001.00----------1.00------------
........................................................................................................................................................................................................................................AGTGAAGGGGTGGGGAAGG...............................................................................................................................................................................................................................191.000.00--------1.00--------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTTACATCTTAAGACAGTGT.......2411.001.00---------1.00-------------
...........................................................................................................................................................................................................................................................................................CTACTCAAATCAACTGCCTG...........................................................................................................................................................................201.000.00-----1.00-----------------
......................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTTACTTTTTTTATAT.................................................191.000.00--1.00--------------------
.......................................................................................................................................................................................................TTCTAGAATTAAGGGACC.................................................................................................................................................................................................................................................................181.000.00--------------------1.00--
...........ACTGCGTGCTTCGCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1620.500.50----------------------0.50

Antisense strand
CGTTCCGGCGCACTGCGTGCTTCGCCTAGGGGAGGAAAACTGTCATCGGAGTAAGTGAATCCGTGTCTTTTACATGAATGCCATTTAAACATTTTTAGGAATAACTGTAAGTTGTCGATTTTGAGCTAACATTTCTGCTATCCAAAAACGCCCTCGCACTCTCTCGCACTTCTCGGCACTTAGCTTTCGCGATCGCTATTTCTAGAATTAAGGGACGAGGCCCGGCTCGAGAAGTGAAGGGGTGGGGATCAGGTTTCCAGTTTTACTTCAAAACTGCCGTCTCCTACTCAAATCAACTGGAAACAGTGAAAGGAGTTATTATTATTAGGAGTTATTATTACCGCCTTTCTTGTAGACAATTCTTGTATGTTCAAGAAGTAGTTTTCTATCTGCTTAATTTTTGTTACTCTTTACTTTTTTTTAGGAGTTCTGCGTCCGGGTTTGAAATTTACATCTTAAGACAGTGTAGGAAGT
......................................................................................................................................................................................................................................................................................................................................((((((..............((((((...(((.....))).....))))))((((........))))............))))))...............................................................
....................................................................................................................................................................................................................................................................................................................................325................................................................................................424................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR553576(SRX182782)
source: Testis. (testes)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040027(GSM532912)
G220T. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.................................................................................................................................................AGTGCGAGAGAGTGCGAGGGCGTTT................................................................................................................................................................................................................................................................................................................ 2511.001.00-----------1.00-----------
.........................................................................................................................................GAGGGCGTTTTTGGATAG............................................................................................................................................................................................................................................................................................................................... 1811.001.00-------------1.00---------
...................................................................................................................................................................................................................................................TTGAAGTAAAACTGGAAACCTGATCCCC........................................................................................................................................................................................................... 2811.001.00-------1.00---------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTAGGAGTTCTGCTGC...................................... 211.000.00---------------------1.00-
..............................................................................................................................................................................................................................................................................................................ACAGTGAAAGGAGTTAAACG........................................................................................................................................................ 201.000.00-----1.00-----------------
.........................................................ATGTAAAAGACACGGATT............................................................................................................................................................................................................................................................................................................................................................................................................... 1811.001.00------1.00----------------
.......................................................................................................................................................................................................................................................................................................................GGAGTTATTATTATTAGTAG............................................................................................................................................... 201.000.00-----1.00-----------------
......................................TACTCCGATGACAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................... 1520.500.50--0.50--------------------