ID: uc001qug.3_intron_5_0_chr12_8349115_f.3p
GENE: FAM66C(6)
chr12:8368202-8368451+


(10)
BREAST
(5)
CELL-LINE
(5)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(2)
OTHER
(5)
SKIN

Sense strand
GGACATCATAACGATTTCATAGTGTCTATGGTCATCTTGGTAATTCCTCAGATAATTCCTGGCAATTCTGTTAGGTCTTGAACTTCACTTACTTCTTACATGTTTAATAAAAAGAAGTTCAAAACATTGCCAGGGCTGTTGAATTCCCACAGGCTTGTCTTCCCTTTAAAATTTATCACATGGTTTGTACTCCTTTGCAGATATAATACGTAAGTTTGGAGGTGGATGCTTTCAGCCATTAAGTTCAAAA
..................................................((((..((((((((((........((.(((((((((...........................))))))))).)))))))))))).))))..............................................................................................................
..................................................51..........................................................................................143.........................................................................................................
SizePerfect hitTotal NormPerfect NormTAX577738(Rovira)
total RNA. (breast)
TAX577740(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
TAX577580(Rovira)
total RNA. (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189785TAX577744(Rovira)
total RNA. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
TAX577746(Rovira)
total RNA. (breast)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR040016(GSM532901)
G645N. (cervix)
SRR040036(GSM532921)
G243N. (cervix)
SRR029128(GSM416757)
H520. (cell line)
TAX577739(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR040012(GSM532897)
G648N. (cervix)
SRR029131(GSM416760)
MCF7. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
........................................................................................................................AAAACATTGCCAGGGATTT...............................................................................................................1913.000.006.003.00-1.001.00--------1.00---1.00------------
......................................................ATTCCTGGCAATTCTGTTCT................................................................................................................................................................................203.000.00-------2.00------------1.00---------
........................................................................................................................AAAACATTGCCAGGGCTTTC..............................................................................................................202.000.002.00-----------------------------
........................................................................................................................AAAACATTGCCAGGGCTGTC..............................................................................................................2012.001.002.00-----------------------------
........................................................................................................................AAAACATTGCCAGGGCTGTCCT............................................................................................................2211.001.001.00-----------------------------
..................................................................................................................................CAGGGCTGTTGAATTCTG......................................................................................................181.000.00-----------------------1.00------
........................................................................................................................AAAACATTGCCAGGGCTTACC.............................................................................................................211.000.001.00-----------------------------
...........................................................................................................................ACATTGCCAGGGCTGAATC............................................................................................................191.000.00--1.00---------------------------
...........................................................................................................................ACATTGCCAGGGCTGTACA............................................................................................................191.000.00-----1.00------------------------
........................................................................................................................AAAACATTGCCAGGGATTG...............................................................................................................191.000.00---1.00--------------------------
...................................................................................................................................AGGGCTGTTGAATTCATCG....................................................................................................191.000.00-------------------1.00----------
........................................................................................................................AAAACATTGCCAGGGTATG...............................................................................................................191.000.00----1.00-------------------------
.................................................................................................................................................................CCCTTTAAAATTTATCTCAT.....................................................................201.000.00------1.00-----------------------
......................................................ATTCCTGGCAATTCTGTTTT................................................................................................................................................................................201.000.00---------------------1.00--------
........................................................................................................................AAAACATTGCCAGGGATGT...............................................................................................................191.000.001.00-----------------------------
........................................................................................................................AAAACATTGCCAGGGAGTT...............................................................................................................191.000.00--1.00---------------------------
.................................................................................................................................................................CCCTTTAAAATTTATCTCAG.....................................................................201.000.00------1.00-----------------------
...........................................................................................................................ACATTGCCAGGGCTGACCG............................................................................................................191.000.00----------1.00-------------------
........................................................................................................................AAAACATTGCCAGGGCTGTCCA............................................................................................................2211.001.001.00-----------------------------
........................................................................................................................AAAACATTGCCAGGGCTGACCT............................................................................................................221.000.001.00-----------------------------
........................................................................................................................................................................AAATTTATCACATGGTGCTG..............................................................201.000.00---------1.00--------------------
........................................................................................................................AAAACATTGCCAGGGCTTAA..............................................................................................................201.000.00-1.00----------------------------
........................................................................................................................AAAACATTGCCAGGGTTTT...............................................................................................................191.000.00-1.00----------------------------
........................................................................................................................AAAACATTGCCAGGGCTTTG..............................................................................................................201.000.001.00-----------------------------
........................................................................................................................AAAACATTGCCAGGGATT................................................................................................................181.000.001.00-----------------------------
........................................................................................................................AAAACATTGCCAGGGCTTTGA.............................................................................................................211.000.001.00-----------------------------
...........................................................................................................................ACATTGCCAGGGCTGTCG.............................................................................................................181.000.00----------------1.00-------------
........................................................................................................................AAAACATTGCCAGGGCTGTG..............................................................................................................2011.001.00------------1.00-----------------
...........................................................................................................................ACATTGCCAGGGCTGACGA............................................................................................................191.000.00-----1.00------------------------
......................................................ATTCCTGGCAATTCTGTTCTT...............................................................................................................................................................................211.000.00--------------1.00---------------
.....................................................................GTTAGGTCTTGAACTCTG...................................................................................................................................................................181.000.00--------1.00---------------------
........................................................................................................................AAAACATTGCCAGGGCTGTCCAT...........................................................................................................2311.001.001.00-----------------------------
........................................................................................................................AAAACATTGCCAGGGCTTTCC.............................................................................................................211.000.001.00-----------------------------
...........................................................................................................................ACATTGCCAGGGCTGTCCA............................................................................................................191.000.00----------------------1.00-------
........................................................................................................................AAAACATTGCCAGGGCTGTTTT............................................................................................................221.000.00--1.00---------------------------
........................................................................................................................AAAACATTGCCAGGGATGA...............................................................................................................191.000.00---------------1.00--------------
........................................................................................................................AAAACATTGCCAGGGCTGTCA.............................................................................................................2111.001.00---1.00--------------------------
........................................................................................................................AAAACATTGCCAGGGCTTTT..............................................................................................................201.000.001.00-----------------------------
................................................................................................................................GCCAGGGCTGTTGAATT.........................................................................................................1721.001.00--------0.50------------------0.50--
........................................................................................................................AAAACATTGCCAGGGCTGT...............................................................................................................1911.001.00--1.00---------------------------
........................................................................................................................AAAACATTGCCAGGGGTTT...............................................................................................................191.000.00-1.00----------------------------
.................................................................................................................................CCAGGGCTGTTGAATT.........................................................................................................1621.001.00------------------------0.50-0.50---
........................................................................................................................AAAACATTGCCAGGGCTGTGTTT...........................................................................................................2311.001.00--1.00---------------------------
........................................................................................................................AAAACATTGCCAGGGCTTT...............................................................................................................191.000.00------------------1.00-----------
..................................................................................................................................................................................................................TAAGTTTGGAGGTGGATG......................1820.500.50-------------------------0.50----
................................................................................................................................................TCCCACAGGCTTGTCT..........................................................................................1670.140.14-----------------------------0.14

Antisense strand
GGACATCATAACGATTTCATAGTGTCTATGGTCATCTTGGTAATTCCTCAGATAATTCCTGGCAATTCTGTTAGGTCTTGAACTTCACTTACTTCTTACATGTTTAATAAAAAGAAGTTCAAAACATTGCCAGGGCTGTTGAATTCCCACAGGCTTGTCTTCCCTTTAAAATTTATCACATGGTTTGTACTCCTTTGCAGATATAATACGTAAGTTTGGAGGTGGATGCTTTCAGCCATTAAGTTCAAAA
..................................................((((..((((((((((........((.(((((((((...........................))))))))).)))))))))))).))))..............................................................................................................
..................................................51..........................................................................................143.........................................................................................................
SizePerfect hitTotal NormPerfect NormTAX577738(Rovira)
total RNA. (breast)
TAX577740(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
TAX577580(Rovira)
total RNA. (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189785TAX577744(Rovira)
total RNA. (breast)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
TAX577746(Rovira)
total RNA. (breast)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR040016(GSM532901)
G645N. (cervix)
SRR040036(GSM532921)
G243N. (cervix)
SRR029128(GSM416757)
H520. (cell line)
TAX577739(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR040012(GSM532897)
G648N. (cervix)
SRR029131(GSM416760)
MCF7. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
..................................................................................................................................................CCACAGGCTTGTCTTCCCTTT................................................................................... 211.000.00-----------1.00------------------
..............CCAAGATGACCATAGACACTATGAAA.................................................................................................................................................................................................................. 2660.170.17----------------------------0.17-