ID: uc001qmi.1_intron_1_0_chr12_3724606_r.3p
GENE: EFCAB4B(13)
chr12:3724556-3724805-


(3)
B-CELL
(2)
BRAIN
(53)
BREAST
(35)
CELL-LINE
(4)
CERVIX
(1)
FIBROBLAST
(7)
HEART
(1)
HELA
(9)
LIVER
(2)
OTHER
(38)
SKIN
(4)
UTERUS

Sense strand
ACTCTCTGGCTTTACAATTACAGCTGTGCACCTGTACTGTCCAGGGGGGGATGTTCAGGACTCTCTCTGATGCCGTGGTGAGGGTGGGTTCTCTCCATATGGCCCAGATGACCTGTAACCTGAGGGTAGCTTGTCCAGGTTGCCAGCCCCTGGGCCTATCAACTTCTCCATCACTGACACGATCTCTTCCCCTCTCCCAGGTTCCTCAAGGAGCAAGAAGACACAGTGAGAGAGGACACCATTCAGGTCG
.................................................................................................................................................(((....)))...............................................................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189784SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577744(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR189786SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR029131(GSM416760)
MCF7. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR189783TAX577579(Rovira)
total RNA. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577588(Rovira)
total RNA. (breast)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR191478(GSM715588)
30genomic small RNA (size selected RNA from t. (breast)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
GSM416733(GSM416733)
HEK293. (cell line)
SRR189785SRR037931(GSM510469)
293GFP. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR191517(GSM715627)
75genomic small RNA (size selected RNA from t. (breast)
SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191555(GSM715665)
195genomic small RNA (size selected RNA from . (breast)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR037935(GSM510473)
293cand3. (cell line)
SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR029129(GSM416758)
SW480. (cell line)
SRR191519(GSM715629)
86genomic small RNA (size selected RNA from t. (breast)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191475(GSM715585)
18genomic small RNA (size selected RNA from t. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR191467(GSM715577)
115genomic small RNA (size selected RNA from . (breast)
SRR038855(GSM458538)
D10. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR029126(GSM416755)
143B. (cell line)
SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)
SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR191504(GSM715614)
124genomic small RNA (size selected RNA from . (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577453(Rovira)
total RNA. (breast)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577580(Rovira)
total RNA. (breast)
SRR038858(GSM458541)
MEL202. (cell line)
TAX577738(Rovira)
total RNA. (breast)
TAX577745(Rovira)
total RNA. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR343335SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR191487(GSM715597)
126genomic small RNA (size selected RNA from . (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191501(GSM715611)
8genomic small RNA (size selected RNA from to. (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR191481(GSM715591)
43genomic small RNA (size selected RNA from t. (breast)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191526(GSM715636)
127genomic small RNA (size selected RNA from . (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR191446(GSM715556)
140genomic small RNA (size selected RNA from . (breast)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
.................................................................................................................................................GCCCCTGGGCCTATCATAGA.....................................................................................2085.000.0014.00-8.00-1.002.002.00-1.002.004.004.002.003.001.001.003.003.00-2.002.00--2.00----1.001.00---1.00--1.00-1.001.001.001.00-1.001.00-1.001.001.001.001.001.001.00--1.001.00----1.001.00--1.001.001.001.001.001.00--1.00-------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCATA.......................................................................................1823.000.00-8.00-8.00---2.00--------------2.00-1.00----------------------------1.00----------1.00----------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCTAT......................................................................................19614.172.332.17-0.17--1.330.17-0.33-----0.33----------0.170.500.330.170.17--0.17---0.17-0.17------0.50----------------------------0.50-0.330.17-0.170.500.17-0.170.17-0.33----0.17--0.17-0.17--0.330.17--0.17----0.17--0.170.17-----0.17-----0.17-0.170.17-0.170.17-0.17-0.170.170.17----0.17-0.17-0.17----0.170.170.170.170.17--0.17-------
.................................................................................................................................................GCCCCTGGGCCTATCCTAA......................................................................................19611.502.330.50---0.172.33--0.500.33--0.17-0.17---0.17-------0.83-0.17-0.33--0.170.17----0.17-----0.17----------------------------0.17-0.17-0.170.17-0.170.17-0.330.330.170.170.170.170.17-0.33-0.170.17--0.17--------0.17------------0.17--0.17-0.17-----0.17------------0.17----------0.170.17---0.170.17--0.17
.................................................................................................................................................GCCCCTGGGCCTATCATC.......................................................................................186.000.00-2.00-1.00---2.00----------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCATATA.....................................................................................205.000.00--1.00---1.00-----------------------1.00---------------------------1.001.00---------------------------------------------------------------------------------------------------------
............................................................................................................................................................................ACTGACACGATCTCTTCCT...........................................................194.000.001.00---2.00--------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCTCG......................................................................................1963.332.330.50-------0.17--------------------0.17---------------0.17--------------------------------0.17---0.17-----0.17---------------0.170.17---0.17------------0.17----------0.17---0.170.17-0.17--------0.17---------0.17--0.17--
.................................................................................................................................................GCCCCTGGGCCTATCATAGC.....................................................................................203.000.00--------1.00------1.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATC..........................................................................................1562.332.33---------------------------0.33-----------------0.17-------------------------------------0.17---0.17-0.17---0.33-0.170.17-0.17---------------0.17--0.17------------------------0.17----------------------
.................................................................................................................................................GCCCCTGGGCCTATCCCAG......................................................................................1962.332.330.33---1.17-0.17------0.17----------------------------------------------------------------0.17-----------------------0.17-------------------------------------------------------0.17------
.................................................................................................................................................GCCCCTGGGCCTATCAGAAA.....................................................................................202.000.00------------1.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCAAAGA.....................................................................................2012.001.002.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCAGAAT.....................................................................................202.000.00------------------1.00----------------------------------------------------1.00---------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCATAG......................................................................................192.000.002.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCTTAG......................................................................................1961.832.33--------0.17-0.17---0.17--------------------------0.17---------------------------------0.50-0.33---0.17----------------------------------0.17------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCTT.......................................................................................1861.332.33--------------------------0.17--------0.17----------------------------------------------------------------0.17--------------0.17---0.17-0.17--------------------------0.17--------------0.17-
............................................................................................................................................................................ACTGACACGATCTCTTCCGTTG........................................................221.000.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCATCGA.....................................................................................201.000.00---------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCAAAAA.....................................................................................2011.001.00------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCAT........................................................................................171.000.00---------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
...........................................................................TGGTGAGGGTGGGTTCGG.............................................................................................................................................................181.000.00---------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................TATCAACTTCTCCATATG............................................................................181.000.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................ACTGACACGATCTCTTCCTGTT........................................................221.000.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCAAGAC.....................................................................................2011.001.00----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCACTGA.....................................................................................201.000.00------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCAGA.......................................................................................181.000.00--------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................TCTGATGCCGTGGTGAGAGC.....................................................................................................................................................................201.000.00------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................ACTGACACGATCTCTTCCG...........................................................191.000.00----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCATTGA.....................................................................................201.000.00--------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................AGCCCCTGGGCCTATCCTAG......................................................................................201.000.00-----------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCAA........................................................................................1711.001.00--------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCAAAA......................................................................................1911.001.00------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCATAGG.....................................................................................201.000.00---------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCATG.......................................................................................181.000.00-------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................CCCCTGGGCCTATCATAGA.....................................................................................191.000.00------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCACAGA.....................................................................................201.000.00------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................ACTGACACGATCTCTTCCGCTG........................................................221.000.00-------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCAAGAAT....................................................................................2111.001.00------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCTAC......................................................................................1960.832.330.17--------0.17----------------0.17-----------------------------------------------0.17-----------------------------------0.17------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCTAGA......................................................................................1960.832.33-------0.17----------0.33--------------------------------------------------------0.33-----------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCTTG......................................................................................1960.672.33-------------0.17-----------------------------------------------------------------0.17--0.17--------------------------------------------------------0.17-------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCAAG......................................................................................1960.672.330.50-------------------------------------------------------------------------------------------------------------------------------------------------0.17------------------
.................................................................................................................................................GCCCCTGGGCCTATCCTTT......................................................................................1960.672.33--------------0.17----------------------------------------------------------------0.17-----------0.17---------------------0.17---------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCTGA......................................................................................1960.672.330.50-----------------------------------------------------------------------------0.17--------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCCA.......................................................................................1860.502.33-----0.17-------------------------------0.17-------------------------------------------------------------------------------------------------------------0.17-----------------
.................................................................................................................................................GCCCCTGGGCCTATCCC........................................................................................1760.502.33--------------------------0.17-------------------------------------------------0.33----------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCAAA......................................................................................1960.502.33--------------0.17------------------------------0.17-------------------------------------0.17---------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCTCA......................................................................................1960.332.33------------0.17-------------------------------------------------------------0.17------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCAGA......................................................................................1960.332.33--------------------------------------------------------------------------------0.17----------------0.17-------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCGAG......................................................................................1960.332.330.17------------------------------------------0.17-------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................GTGAGAGAGGACACCA.........1640.250.25-----------------------------------------------------------------------------------------------------0.25---------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCTAAA......................................................................................1960.172.33--------------------------------------------------------------------------------------------------------------------------------0.17------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCTAG.......................................................................................1860.172.33-------------------------------------------------------------------------------------0.17-------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCAG.......................................................................................1860.172.33-------------------------------------------------------------------------------------------------0.17-------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCTCC......................................................................................1960.172.33--------------------------------------------0.17------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCTG.......................................................................................1860.172.33---------------------------0.17-----------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCAAT......................................................................................1960.172.33------------------------------------------0.17--------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCAT.......................................................................................1860.172.33------------------------------------------------------------------------------------------0.17--------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCTGG......................................................................................1960.172.33----------------------------------------------------------------------------------------------------------0.17----------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCTCT......................................................................................1960.172.33----------------------------------------0.17----------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCAAC......................................................................................1960.172.33-------------------------------0.17-------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCCAA.......................................................................................1860.172.33---------------------------------------------------------------------------------0.17-----------------------------------------------------------------------------------
.................................................................................................................................................GCCCCTGGGCCTATCTTA.......................................................................................1860.172.33-----------------------------------------------------------------------------0.17---------------------------------------------------------------------------------------

Antisense strand
ACTCTCTGGCTTTACAATTACAGCTGTGCACCTGTACTGTCCAGGGGGGGATGTTCAGGACTCTCTCTGATGCCGTGGTGAGGGTGGGTTCTCTCCATATGGCCCAGATGACCTGTAACCTGAGGGTAGCTTGTCCAGGTTGCCAGCCCCTGGGCCTATCAACTTCTCCATCACTGACACGATCTCTTCCCCTCTCCCAGGTTCCTCAAGGAGCAAGAAGACACAGTGAGAGAGGACACCATTCAGGTCG
.................................................................................................................................................(((....)))...............................................................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189784SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577744(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR189786SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR029131(GSM416760)
MCF7. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR189783TAX577579(Rovira)
total RNA. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577588(Rovira)
total RNA. (breast)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR191478(GSM715588)
30genomic small RNA (size selected RNA from t. (breast)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
GSM416733(GSM416733)
HEK293. (cell line)
SRR189785SRR037931(GSM510469)
293GFP. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR191517(GSM715627)
75genomic small RNA (size selected RNA from t. (breast)
SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR029124(GSM416753)
HeLa. (hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191555(GSM715665)
195genomic small RNA (size selected RNA from . (breast)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR037935(GSM510473)
293cand3. (cell line)
SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR029129(GSM416758)
SW480. (cell line)
SRR191519(GSM715629)
86genomic small RNA (size selected RNA from t. (breast)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191475(GSM715585)
18genomic small RNA (size selected RNA from t. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR191467(GSM715577)
115genomic small RNA (size selected RNA from . (breast)
SRR038855(GSM458538)
D10. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR029126(GSM416755)
143B. (cell line)
SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)
SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR191504(GSM715614)
124genomic small RNA (size selected RNA from . (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577453(Rovira)
total RNA. (breast)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577580(Rovira)
total RNA. (breast)
SRR038858(GSM458541)
MEL202. (cell line)
TAX577738(Rovira)
total RNA. (breast)
TAX577745(Rovira)
total RNA. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR343335SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR191487(GSM715597)
126genomic small RNA (size selected RNA from . (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191501(GSM715611)
8genomic small RNA (size selected RNA from to. (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR191481(GSM715591)
43genomic small RNA (size selected RNA from t. (breast)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
SRR191411(GSM715521)
21genomic small RNA (size selected RNA from t. (breast)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191526(GSM715636)
127genomic small RNA (size selected RNA from . (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR191446(GSM715556)
140genomic small RNA (size selected RNA from . (breast)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
............................................................................................................................................................TATCAACTTCTCCATCATTCT......................................................................... 211.000.00----------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................ACCTGGGAGAGGGGAAGAGATCGTGTCAG................................................ 2911.001.00--------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................GCCAGCCCCTGGGCCTTCAC......................................................................................... 201.000.00---------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
........................................................CCCTCACCACGGCATCAGAGAGAGTCCT...................................................................................................................................................................... 2811.001.00---------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................GCCAGCCCCTGGGCCTGGT.......................................................................................... 191.000.00---------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CCTGAGGGTAGCTTGAAAG................................................................................................................. 191.000.00----1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................CTTGAGGAACCTGGG........................................ 1580.750.75-------------------------0.75-------------------------------------------------------------------------------------------------------------------------------------------