ID: uc001qhi.2_intron_0_0_chr11_134118379_r.3p
GENE: (6)
chr11:134118329-134118578-


(2)
B-CELL 		(1)
BRAIN 		(10)
CELL-LINE 		(1)
HELA 		(4)
LIVER 		(1)
OTHER 		(4)
SKIN 		(1)
TESTES

Sense strand
CCCATGAGGGAGGGAATGTGGCCAGAGTTACCTGTTACTATTACCCAGTACTCTATAGTGCTTGGCACCTGGTAAATAGTTTTGAACGAATGACTGCTCGCCTTAGTACCATGTAAGATGTACCTGTGCCTGGCACAACTTTCCTGTTCAAGAGGGGACATTAAAAACTAATCCTTCCTTTTTCCCTTTTTTTTTTGTAGAAGAGTTTGATTTTGTTTTGAGCCTGGAGGAAAAGGAACCAAGTTAACTG
....................................................((((((((((.(((((..((((....((((((.....(((..((((......)))).))).)))))).)))).))))).))))).............(((((((((........................)))))))))....)))))..................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189785SRR029128(GSM416757)
H520. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTAACA..................................................2719.001.00--2.00--2.005.00-------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTTAAC..................................................2716.001.00-1.004.00-1.00---------------------
...............................................................................................................................................................................TCCTTTTTCCCTTTTTTTTTTTAAC..................................................254.000.004.00-------------------------
...............................................................................................................................................................................TCCTTTTTCCCTTTTTTTTTTAAC...................................................243.000.002.00---1.00---------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTAAC....................................................253.000.003.00-------------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTTTTT..................................................2713.001.00--3.00-----------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTAAC...................................................2613.001.001.002.00------------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTT.....................................................2413.001.00----2.001.00--------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTTTAA..................................................2713.001.00-2.001.00-----------------------
...............................................................................................................................................................................TCCTTTTTCCCTTTTTTTTAAC.....................................................223.000.003.00-------------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTTT....................................................2513.001.001.001.001.00-----------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTA.....................................................2413.001.002.001.00------------------------
..................................................................................................................................................................................TTTTTCCCTTTTTTTTTTAG....................................................202.000.00-1.00-1.00----------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTAACA...................................................262.000.00-1.00-1.00----------------------
..................................................................................................................................................................................TTTTTCCCTTTTTTTTTTAAC...................................................212.000.002.00-------------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTAA....................................................2512.001.00-2.00------------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTTTA...................................................2612.001.00-2.00------------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTTAA...................................................2612.001.00--2.00-----------------------
.......................................................................................................................................................................................................GAAGAGTTTGATTTTATCG................................192.000.00---------2.00----------------
.....................................................................................................................................................................................TTCCCTTTTTTTTTTGTTGGC................................................212.000.002.00-------------------------
..........................................................................................................................................................................................................................TGAGCCTGGAGGAAAAGGAACC..........2212.002.00------------1.001.00------------
......................................................................................................................................................................................................................GTTTTGAGCCTGGAGGAAAAG...............2112.002.00-------2.00------------------
..............................................................................................................................................................................TTCCTTTTTCCCTTTTTTTCAAC.....................................................232.000.001.00--1.00----------------------
...................................................................................................................................................................................................................................AGGAAAAGGAACCAACAA.....182.000.00----------2.00---------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTT...........................................................1891.331.330.11-0.220.78-0.22--------------------
.......................................................................................................................................................................................CCCTTTTTTTTTTGTGTCC................................................191.000.00------------------1.00-------
.....................................................................................................................................................................................TTCCCTTTTTTTTTTGTTTCT................................................211.000.00---1.00----------------------
..............................................................................................................................................................................TTCCTTTTTCCCTTTTTTCTTA......................................................221.000.001.00-------------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTTAAA..................................................2711.001.00--1.00-----------------------
.............................................................................................................................................................................................TTTTTTTGTAGAAGAATT...........................................181.000.00----------------------1.00---
................................................................................................................................................................................CCTTTTTCCCTTTTTTTTTTTTTG..................................................241.000.00-----1.00--------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTGACCA.................................................281.000.00-1.00------------------------
...................................................................................................................................................................................TTTTCCCTTTTTTTTTTAG....................................................191.000.00-1.00------------------------
..............................................................................................................................................................................TTCCTTTTTCCCTTTTTTTTTTAAC...................................................251.000.00----1.00---------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTCA.......................................................221.000.00----1.00---------------------
...............................................................................................................................................................................TCCTTTTTCCCTTTTTTTTAAA.....................................................221.000.001.00-------------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTC.....................................................2411.001.001.00-------------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTT......................................................2311.001.00-1.00------------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTTA....................................................2511.001.00--1.00-----------------------
..........................................................................................................................................................................................TTTTTTTTTTGTAGAAGGACC...........................................211.000.00----1.00---------------------
..............................................................................................................................................................................................................TTGATTTTGTTTTGAGCCTGGAGGAAAAG...............2911.001.00--------------1.00-----------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTAA.....................................................241.000.001.00-------------------------
..................................................................................................................................................................................TTTTTCCCTTTTTTTTTTAAGT..................................................221.000.00---1.00----------------------
...........................................................................................................................................................................................................................GAGCCTGGAGGAAAAGGAAGC..........211.000.00-------1.00------------------
......................................................................................................................................................................................TCCCTTTTTTTTTTGTATCTG...............................................211.000.00---1.00----------------------
...........................................................................................................................................................................................................................GAGCCTGGAGGAAAAGGAACC..........2111.001.00-------1.00------------------
..................................................CTCTATAGTGCTTGGTGTC.....................................................................................................................................................................................191.000.001.00-------------------------
..................................................................................................................................................................................TTTTTCCCTTTTTTTTTTCTG...................................................211.000.00---1.00----------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTTAAT..................................................2711.001.00-1.00------------------------
....................................................................................................................................................................................TTTCCCTTTTTTTTTTCCAA..................................................201.000.00-----1.00--------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTCCTG........................................................211.000.00--------1.00-----------------
....................................................................................................................................................................................TTTCCCTTTTTTTTTTCAAG..................................................201.000.00---1.00----------------------
...............................................................................................................................................................................TCCTTTTTCCCTTTTTTTTTTA.....................................................221.000.001.00-------------------------
..................................................................................................................................................................................TTTTTCCCTTTTTTTTTTGTGGGC................................................241.000.001.00-------------------------
................................................................................................................................................................................................................GATTTTGTTTTGAGCCTGGAGG....................2211.001.00-------------------1.00------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTCAAC...................................................261.000.00---1.00----------------------
...............................................................................................................................................................................TCCTTTTTCCCTTTTTTTCAAC.....................................................221.000.001.00-------------------------
.................................................................................................................................................................................CTTTTTCCCTTTTTTTTATG.....................................................201.000.00-----1.00--------------------
...............................................................................................................................................................................TCCTTTTTCCCTTTTTTCTTC......................................................211.000.001.00-------------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTAAC......................................................231.000.00---1.00----------------------
..............................................................................................................................................................................................................................CCTGGAGGAAAAGGAACCAAGCGA....241.000.00-----------1.00--------------
.........................................................................................................................................................................................................................TTGAGCCTGGAGGAAAAGGAACCAAGTTA....2911.001.00-----------------------1.00--
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTAAC.....................................................2431.000.670.670.33------------------------
...................................................................................................................................................................................TTTTCCCTTTTTTTTTTAGGG..................................................211.000.00----1.00---------------------
...............................................................................................................................................................................................................................CTGGAGGAAAAGGAACTCTG.......201.000.00--------------------1.00-----
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTTTT...................................................2611.001.00--1.00-----------------------
...............................................................................................................................................................................TCCTTTTTCCCTTTTTTCA........................................................191.000.001.00-------------------------
........................................................................................................................................................................................................AAGAGTTTGATTTTGCTAT...............................191.000.00---------------------1.00----
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTCT.....................................................241.000.001.00-------------------------
..................................................................................................................................................................................TTTTTCCCTTTTTTTTTTCAAG..................................................221.000.00------1.00-------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTTTTCT...................................................2611.001.001.00-------------------------
..................................................................................................................................................................................................................................GAGGAAAAGGAACCAAGTTA....2011.001.00-----------------1.00--------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTAG.......................................................221.000.00-1.00------------------------
..............................................................................................................................................................................TTCCTTTTTCCCTTTTTTTTTTTTAA..................................................261.000.00-1.00------------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTAACA.....................................................241.000.00-----1.00--------------------
...................................................................................................................................................................................................................................AGGAAAAGGAACCAAGTTA....1911.001.00---------------1.00----------
...............................................................................................................................................................................TCCTTTTTCCCTTTTTAAC........................................................191.000.001.00-------------------------
...............................................................................................................................................................................TCCTTTTTCCCTTTTTTAAC.......................................................201.000.001.00-------------------------
..................................................................................................................................................................................................................................GAGGAAAAGGAACCAAGC......181.000.00--------1.00-----------------
...............................................................................................................................................................................TCCTTTTTCCCTTTTTTTTT.......................................................2090.670.670.67-------------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTAACA....................................................2530.670.67-0.330.33-----------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTT........................................................2130.670.670.33-0.33-----------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTT..........................................................1960.500.500.33-0.17-----------------------
.........................................................................................................................................................................................................................TTGAGCCTGGAGGAAAAG...............1820.500.50-------0.50------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTCT......................................................2330.330.670.33-------------------------
..........................................................................................................................................................................................TTTTTTTTTTGTAGAAGAG.............................................1930.330.33----0.33---------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTG.......................................................2230.330.67--0.33-----------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTTTAA......................................................2330.330.67--0.33-----------------------
..............................................................................................................................................................................TTCCTTTTTCCCTTTTTTTTTAAC....................................................2470.290.140.14---0.14---------------------
...............................................................................................................................................................................TCCTTTTTCCCTTTTTTTTTAAC....................................................2390.220.670.22-------------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTG..........................................................1990.221.33--0.22-----------------------
...............................................................................................................................................................................TCCTTTTTCCCTTTTTTTTTC......................................................2190.220.670.22-------------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTAAC.......................................................2260.170.50---0.17----------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTG.........................................................2060.170.50--0.17-----------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTAACA......................................................2360.170.50------0.17-------------------
.............................................................................................................................................................................CTTCCTTTTTCCCTTTTTTCG........................................................2160.170.50--------0.17-----------------
..............................................................................................................................................................................TTCCTTTTTCCCTTTTTTTTT.......................................................2170.140.140.14-------------------------
..............................................................................................................................................................................TTCCTTTTTCCCTTTTTTTTGG......................................................2290.110.110.11-------------------------
..............................................................................................................................................................................TTCCTTTTTCCCTTTTTTTT........................................................2090.110.110.11-------------------------
..............................................................................................................................................................................TTCCTTTTTCCCTTTTTTTTAACA....................................................2490.110.110.11-------------------------

Antisense strand
CCCATGAGGGAGGGAATGTGGCCAGAGTTACCTGTTACTATTACCCAGTACTCTATAGTGCTTGGCACCTGGTAAATAGTTTTGAACGAATGACTGCTCGCCTTAGTACCATGTAAGATGTACCTGTGCCTGGCACAACTTTCCTGTTCAAGAGGGGACATTAAAAACTAATCCTTCCTTTTTCCCTTTTTTTTTTGTAGAAGAGTTTGATTTTGTTTTGAGCCTGGAGGAAAAGGAACCAAGTTAACTG
....................................................((((((((((.(((((..((((....((((((.....(((..((((......)))).))).)))))).)))).))))).))))).............(((((((((........................)))))))))....)))))..................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189785SRR029128(GSM416757)
H520. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................................................................................TCTTGAACAGGAAAGTTGTGCCAGGCAC................................................................................................. 2811.001.00----------------1.00---------
.........................................................CAAAACTATTTACCAGGTGCCAAGCAC...................................................................................................................................................................... 2711.001.00------------------------1.00-
...........TAACTCTGGCCACATTCCC............................................................................................................................................................................................................................ 1920.500.50-------------------------0.50