ID: uc001qfz.2_intron_1_0_chr11_130103278_r.3p
GENE: (4)
chr11:130103228-130103477-


(2)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(2)
AGO3.ip 		(13)
B-CELL 		(5)
BRAIN 		(8)
BREAST 		(31)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(6)
HEART 		(3)
HELA 		(1)
KIDNEY 		(13)
LIVER 		(1)
OTHER 		(29)
SKIN 		(1)
TESTES 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
TTACTGCTGTACACAGGATGTTGTATAATATTTTGTAAAGCCTGTTGTTTTTGGAAGTATTTATGGTAAGCTTTCTTAAAAATTATTATGGTAAATACTTCTGAAATCCGGCGTACTTTTCTTTAAGCTTTGTCATTTCTGTTATGATTTTTCATGGTGAAATTTTGGTACTGAGATGGGCATTCTCTGTACCTTTATAGTACCACTCCAAAGGCAAGGAACCATGATTGACAACAGTCAAGCTGTGGAT
...............................................................................................(((..(((.....))).)))...........(((....((((((.((...((..((((.....))))..))...)).))))))))).....................................................................
.........................................................................................90...........................................................................................183.................................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		TAX577740(Rovira)
total RNA. (breast)		SRR343335SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189782SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR343334SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR038855(GSM458538)
D10. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532929(GSM532929)
G702N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..............................................................................................ATACTTCTGAAATCCGGCGTA.......................................................................................................................................21159.0059.0032.0011.00---------3.00-----1.001.00--1.001.00-2.00---------1.00-1.00-------------1.001.00--1.00---1.00---1.00---------------------------------------------------------
.............................................................................................AATACTTCTGAAATCCGGCGTA.......................................................................................................................................22130.0030.0027.00----------------------------------1.00---------------------------1.00-1.00------------------------------------------------------
..............................................................................................ATACTTCTGAAATCCGGCGT........................................................................................................................................20117.0017.007.001.00--6.00------------------------------------------------1.00-1.001.00---------------------------------------------------------------
..............................................................................................ATACTTCTGAAATCCGGCGTAA......................................................................................................................................2219.0059.00------------1.00---------------1.00---------------1.001.00---1.00--------------1.00-1.00-1.00-1.00-------------------------------------------------
..................................................................................................................................................................................................................................ATTGACAACAGTCAAGCTGTGGA.2336.336.333.33-------3.00---------------------------------------------------------------------------------------------------------------
..............................................................................................ATACTTCTGAAATCCGGCGTAT......................................................................................................................................2216.0059.00------------1.001.00-1.00------------------------------1.001.00-----------1.00------------------------------------------------------------
........................................................................................TGGTAAATACTTCTGAAATCCGGC..........................................................................................................................................2424.504.50----------4.00--0.50----------------------------------------------------------------------------------------------------------
.................................................................................................................................................................ATTTTGGTACTGAGAAGG.......................................................................183.000.00---------------------------------1.00------------------1.00----------------1.00--------------------------------------------------
.............................................................................................................................................................................................................................CCATGATTGACAACAACCG..........193.000.00-------------------2.00--------------------1.00-------------------------------------------------------------------------------
....................................................................................................................................................................TTGGTACTGAGATGGGCATT..................................................................2042.752.75----------------0.25-----------0.50--0.500.25-----0.25-----------------------------------------------------------------0.25-0.250.25----------0.25-
.............................................................................................AATACTTCTGAAATCCGGCGT........................................................................................................................................2112.002.00-----------------1.00-------------------------1.00----------------------------------------------------------------------------
.....................................................................................TTATGGTAAATACTTCTGAAATCCGGCGTACT.....................................................................................................................................3212.002.00-----1.00------------------------1.00-----------------------------------------------------------------------------------------
...................................................................................TATTATGGTAAATACTTCTGAAATCCGGCG.........................................................................................................................................3012.002.00-------1.00-1.00--------------------------------------------------------------------------------------------------------------
.....................................................................................TTATGGTAAATACTTCTGAAATCCGGCGTA.......................................................................................................................................3012.002.00--2.00---------------------------------------------------------------------------------------------------------------------
..............................................................................................ATACTTCTGAAATCCGGCG.........................................................................................................................................1912.002.00------------------------------------------1.00-----------------1.00-----------------------------------------------------------
...............................................................................................TACTTCTGAAATCCGGCGTA.......................................................................................................................................2012.002.002.00-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CAAGGAACCATGATTGACAA................2021.501.50-----------------------------------------1.00-----------------------------------------------0.50------------------------------
.................................................................................ATTATTATGGTAAATACTTCTGAA.................................................................................................................................................2421.501.50----------------1.00-----------------------------------------------------------------0.50-------------------------------------
...............................................................................................................................................................AAATTTTGGTACTGAGATGGG......................................................................2141.501.501.50-----------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................GAGATGGGCATTCTCTGTACC.........................................................2131.331.33--0.331.00--------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................TGGTACTGAGATGGGCAT...................................................................1841.251.25------------------------------0.250.75------------------------------------------------------------------------------------0.25---
..............................................................................................ATACTTCTGAAATCCGGCGG........................................................................................................................................2011.002.00-----------------------------------------------------------------------1.00------------------------------------------------
............................................................................................................................................................................GAGATGGGCATTCTCTGTATA.........................................................2131.001.00--0.330.67--------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTTGGTACTGAGATGGGCACCT.................................................................221.000.00--------------------1.00---------------------------------------------------------------------------------------------------
.........................................................................................................ATCCGGCGTACTTTTCTTTAAGCTCC.......................................................................................................................261.000.00------1.00-----------------------------------------------------------------------------------------------------------------
.............................................................................................................................AGCTTTGTCATTTCTGTTATGATTTCTC.................................................................................................281.000.00--------------1.00---------------------------------------------------------------------------------------------------------
.......................................................................................................AAATCCGGCGTACTTTTCTTT..............................................................................................................................2111.001.00------------------------------------------------------------------------1.00-----------------------------------------------
........................................................................................TGGTAAATACTTCTGAAATCCGGCGT........................................................................................................................................2611.001.00-------1.00----------------------------------------------------------------------------------------------------------------
.....................................................................................TTATGGTAAATACTTCTGAAATCCGGCG.........................................................................................................................................2811.001.00--1.00---------------------------------------------------------------------------------------------------------------------
..........................................................................................GTAAATACTTCTGAAATCCGGCGTACTTTT..................................................................................................................................3011.001.00-----1.00------------------------------------------------------------------------------------------------------------------
...................................................................................................TCTGAAATCCGGCGTACTTTTC.................................................................................................................................2211.001.00---------1.00--------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................GAGATGGGCATTCTCTGTA...........................................................1931.001.00--0.33----------0.33---------------------------------------------------------------------------------0.33------------------------
................................................................................................ACTTCTGAAATCCGGCGTACTTT...................................................................................................................................2311.001.00--------------------------------1.00---------------------------------------------------------------------------------------
...................................................................................................TCTGAAATCCGGCGTACTTTCCTT...............................................................................................................................241.000.00------1.00-----------------------------------------------------------------------------------------------------------------
.........................................................................................................ATCCGGCGTACTTTTCTTTAAGCTTTGCCA...................................................................................................................301.000.00--------------1.00---------------------------------------------------------------------------------------------------------
.............................................................................................AATACTTCTGAAATCCGGCGCA.......................................................................................................................................2211.001.001.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................................ATACTTCTGAAATCCGGCGTATT.....................................................................................................................................2311.0059.00-1.00----------------------------------------------------------------------------------------------------------------------
...............................................................................................................CGTACTTTTCTTTAAGCT.........................................................................................................................1811.001.00-------------------------------------------------------------1.00----------------------------------------------------------
.....................................................................................TTATGGTAAATACTTCTGAAATCCGGCGTACTTTTCTTTAAGCTTTGTCATTTCTGTTATGATT.....................................................................................................6411.001.00---------------------------------------1.00--------------------------------------------------------------------------------
...................................................................................................................................................................................................................AGGCAAGGAACCATGATTTT...................201.000.00-----------------------------1.00------------------------------------------------------------------------------------------
...............................................................................................................................CTTTGTCATTTCTGTTATGATTTTCATG...............................................................................................281.000.00-------------------------1.00----------------------------------------------------------------------------------------------
..........................................................................................GTAAATACTTCTGAAATCCGGCGT........................................................................................................................................2411.001.00---------------1.00--------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TTGGTACTGAGATGGGCATTCTCTGCACC.........................................................291.000.00--------------------1.00---------------------------------------------------------------------------------------------------
...................................................................................................TCTGAAATCCGGCGTACTTTTCT................................................................................................................................2311.001.00---------1.00--------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................AAGGCAAGGAACCATGATTGAC..................2221.001.00-------------------------------------1.00----------------------------------------------------------------------------------
...............................................................................................................................................................AAATTTTGGTACTGAGATGGGCATT..................................................................2541.001.00------------0.25-----------------------------------------------------------------------------0.50------------------------0.25----
...................................................................................................TCTGAAATCCGGCGTACTTTTCTTTA.............................................................................................................................2611.001.00---1.00--------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................ATTGACAACAGTCAAGCTGTTGA.231.000.00--------1.00---------------------------------------------------------------------------------------------------------------
..........................................................................................................TCCGGCGTACTTTTCTTTAAGCTGTC......................................................................................................................261.000.00------1.00-----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................TTTTGGTACTGAGATTTGT.....................................................................191.000.00--------------------------1.00---------------------------------------------------------------------------------------------
.............................................................................................AATACTTCTGAAATCCGGCG.........................................................................................................................................2011.001.00--------------------------------------1.00---------------------------------------------------------------------------------
..................................................................................................TTCTGAAATCCGGCGTACTTTT..................................................................................................................................2211.001.00--1.00---------------------------------------------------------------------------------------------------------------------
.........................................................................................GGTAAATACTTCTGAAATCCGGCG.........................................................................................................................................2411.001.00-----1.00------------------------------------------------------------------------------------------------------------------
........................................................................................TGGTAAATACTTCTGAAATCCGGCGTA.......................................................................................................................................2711.001.00--1.00---------------------------------------------------------------------------------------------------------------------
..............................................................................................ATACTTCTGAAATCCGGCCTC.......................................................................................................................................211.000.00------------1.00-----------------------------------------------------------------------------------------------------------
.........................................................................................GGTAAATACTTCTGAAATCCGGCGTACT.....................................................................................................................................2811.001.00-----1.00------------------------------------------------------------------------------------------------------------------
.......................................................................................ATGGTAAATACTTCTGAAATCCGGCGTAC......................................................................................................................................2911.001.00---------1.00--------------------------------------------------------------------------------------------------------------
.....................................................................................TTATGGTAAATACTTCTGAAATCCGGCGTAC......................................................................................................................................3111.001.00-----1.00------------------------------------------------------------------------------------------------------------------
.............................................................................................AATACTTCTGAAATCCGGCGTT.......................................................................................................................................2211.002.00---------------------------------------------------------1.00--------------------------------------------------------------
............................................................................................AAATACTTCTGAAATCCGGCG.........................................................................................................................................2111.001.00-----------------------1.00------------------------------------------------------------------------------------------------
.....................................................................................TTATGGTAAATACTTCTGAAATCCGGCGT........................................................................................................................................2911.001.00-------1.00----------------------------------------------------------------------------------------------------------------
.............................................................................................AATACTTCTGAAATCCGGCGTACTTTTCT................................................................................................................................2911.001.00------1.00-----------------------------------------------------------------------------------------------------------------
.................................................................................ATTATTATGGTAAATACTTCT....................................................................................................................................................2121.001.00---1.00--------------------------------------------------------------------------------------------------------------------
....................................................................................ATTATGGTAAATACTTCTGAAATCCGGCGTA.......................................................................................................................................3111.001.00------------------1.00-----------------------------------------------------------------------------------------------------
........................................................................................TGGTAAATACTTCTGAAATA..............................................................................................................................................201.000.00---1.00--------------------------------------------------------------------------------------------------------------------
..................................................................................TTATTATGGTAAATACTTCT....................................................................................................................................................2021.001.00----------------1.00-------------------------------------------------------------------------------------------------------
....................................................................................ATTATGGTAAATACTTCTGAAATCCGGCG.........................................................................................................................................2911.001.00------------------------------------------------1.00-----------------------------------------------------------------------
.......................................................................................ATGGTAAATACTTCTGAAATCCGGCGTA.......................................................................................................................................2811.001.00-------------1.00----------------------------------------------------------------------------------------------------------
.........................................................................................................ATCCGGCGTACTTTTCTTTAAGCTTCGT.....................................................................................................................281.000.00--------------1.00---------------------------------------------------------------------------------------------------------
......................................................................................................................................ATTTCTGTTATGATTATGT.................................................................................................191.000.00---1.00--------------------------------------------------------------------------------------------------------------------
............................................................................................AAATACTTCTGAAATCCTGCG.........................................................................................................................................211.000.00-----------------------1.00------------------------------------------------------------------------------------------------
.................................................................................................................................................................ATTTTGGTACTGAGATGGGC.....................................................................2040.750.75----------------------------------------------------------------------------0.75-------------------------------------------
...................................................................................................................................................................TTTGGTACTGAGATGGGCAT...................................................................2040.750.75-----------0.25---------------------------------------------------------------------------0.50--------------------------------
....................................................................................................................................................................TTGGTACTGAGATGGGCAT...................................................................1940.750.75---------------------0.25------------------------------------------------------------------0.50-------------------------------
....................................................................................................................................................................TTGGTACTGAGATGGGCATTC.................................................................2140.750.75---0.25----------------------------------------------------------------------0.25-----------------0.25---------------------------
....................................................................................ATTATGGTAAATACTTCTGAAATCCGGC..........................................................................................................................................2820.500.50---------------------------------------------------------------------------0.50--------------------------------------------
.......................................................................................................................TCTTTAAGCTTTGTCATTTCTGTTATG........................................................................................................2720.500.50------0.50-----------------------------------------------------------------------------------------------------------------
.......................................................................................ATGGTAAATACTTCTGAAATCCGGC..........................................................................................................................................2520.500.50--0.50---------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCCAAAGGCAAGGAACCATGATTGACAA................2820.500.50-------0.50----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................TTATAGTACCACTCCAAAGGCAAGGAA.............................2720.500.50-------------------------------------------------------------------------------------------0.50----------------------------
..................................................................................................................................................................................................................AAGGCAAGGAACCATGATTGACAA................2420.500.50---------------------0.50--------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TCCAAAGGCAAGGAACCATGATTGAC..................2620.500.50-------0.50----------------------------------------------------------------------------------------------------------------
...........................................GTTGTTTTTGGAAGTATTTATGGTAAGC...................................................................................................................................................................................2820.500.50--0.50---------------------------------------------------------------------------------------------------------------------
........................................................................TTCTTAAAAATTATTATGGTAAATACTTCTGAA.................................................................................................................................................3320.500.50-------------------------------------------------------------------0.50----------------------------------------------------
..................................................................................................................................................................................................................AAGGCAAGGAACCATGATTGACA.................2320.500.50---0.50--------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................TACCTTTATAGTACCACTCCAAAG.....................................2420.500.50--------------------------0.50---------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AAAGGCAAGGAACCATGATT.....................2020.500.50---------------------------0.50--------------------------------------------------------------------------------------------
................................................................................................................................................................AATTTTGGTACTGAGATGGGCAT...................................................................2340.500.50--0.25-----0.25---------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTTGGTACTGAGATGGGCATT..................................................................2140.500.50-0.25-------------------------------------------------------------------------0.25--------------------------------------------
.........................................................................................GGTAAATACTTCTGAAATCCGGC..........................................................................................................................................2320.500.50---------------------------------------------------------------------------------------------0.50--------------------------
..................................................................................................................................................................TTTTGGTACTGAGATGGGCATT..................................................................2240.500.50------------------------------------0.25----------------------------------------------------------------0.25------------------
.......TGTACACAGGATGTTGTATA...............................................................................................................................................................................................................................2020.500.50------------------------------------------------------------------------------0.50-----------------------------------------
..................................................................................................................................................................................................................AAGGCAAGGAACCATGATTGACAACA..............2620.500.50-------------------------------------------------------------------0.50----------------------------------------------------
........................................................................................................................................................................................................................AGGAACCATGATTGACA.................1720.500.50-----0.50------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................TGGTACTGAGATGGGCATT..................................................................1940.500.50--------------------------------------------------------------------------------------------------0.25----------0.25----------
........................................................................................TGGTAAATACTTCTGAAATCCGG...........................................................................................................................................2320.500.50-----------------------------------------------------------------------------------0.50------------------------------------
...........................................GTTGTTTTTGGAAGTATTTATGGTAAG....................................................................................................................................................................................2720.500.50---0.50--------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AAAGGCAAGGAACCATGATTGAC..................2320.500.50------0.50-----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................AAGGCAAGGAACCATGATTGACAAC...............2520.500.50--------------------------------------------------------------------------------0.50---------------------------------------
...............................................................................................................................CTTTGTCATTTCTGTTATGATT.....................................................................................................2220.500.50------------------------------------------------------------------------------------0.50-----------------------------------
...............................................................................................................................................................AAATTTTGGTACTGAGATGG.......................................................................2040.500.50--0.25-------------------------------0.25-------------------------------------------------------------------------------------
...........................................................................................................................TAAGCTTTGTCATTTCTGTTATG........................................................................................................2320.500.50---------------------------0.50--------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................AGGCAAGGAACCATGATTGAC..................2120.500.50--------------------------------------------------------------------------------------0.50---------------------------------
...............................................................................AAATTATTATGGTAAATACTTCT....................................................................................................................................................2320.500.50-------------------------------------------------------------------------------------0.50----------------------------------
..................................GTAAAGCCTGTTGTTTTTG.....................................................................................................................................................................................................1920.500.50-----------------------------------------------------------------------------0.50------------------------------------------
....................................................................................................................................................................TTGGTACTGAGATGGGCATTA.................................................................2140.502.75-------------0.25--0.25-------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................GATGGGCATTCTCTGTACC.........................................................1930.330.33---------------0.33--------------------------------------------------------------------------------------------------------
................................................TTTTGGAAGTATTTATGGTAAG....................................................................................................................................................................................2230.330.33-------------------------------------------------------------------------------0.33----------------------------------------
...................................................................................................................................................................................................................................TTGACAACAGTCAAGCTGTG...2030.330.33-------------------------------------------------------------------------------------------------0.33----------------------
..............AGGATGTTGTATAATATTT.........................................................................................................................................................................................................................1930.330.33-----------------------------0.33------------------------------------------------------------------------------------------
..............AGGATGTTGTATAATATT..........................................................................................................................................................................................................................1830.330.33----------------------------------------------------------------------------------------------0.33-------------------------
............................................................................................................................................................................GAGATGGGCATTCTCTGTAC..........................................................2030.330.33--0.33---------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................TGGTACTGAGATGGGCATTCTCTGTA...........................................................2630.330.33------------------------------------------------------------------------------------------------0.33-----------------------
................................................................................................................................................................................................................................TGATTGACAACAGTCAAGCTGTGGA.2530.330.33-------0.33----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AGATGGGCATTCTCTGTACC.........................................................2030.330.33-------------------------------------------------------------------------------0.33----------------------------------------
.......................................................................................................................................................................................TCTCTGTACCTTTATAGT.................................................1840.250.25---------------------------------------------------------------------------------0.25--------------------------------------
..................................................................................................................................................................TTTTGGTACTGAGATGGGCATTC.................................................................2340.250.25--------------------------------------------------------------------------0.25---------------------------------------------
...............................................................................................................................................................AAATTTTGGTACTGAGATGGGCATTCT................................................................2740.250.25---------------------0.25--------------------------------------------------------------------------------------------------
................................................................................................................................................................AATTTTGGTACTGAGATGGGC.....................................................................2140.250.25------------------------------------------------------------------------------------------------------0.25-----------------
.................................................................................................................................................................ATTTTGGTACTGAGATGGGCA....................................................................2140.250.25---------------------------0.25--------------------------------------------------------------------------------------------
...............................................................................................................................................................AAATTTTGGTACTGAGATGGGCATTCTC...............................................................2840.250.25--0.25---------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTTGGTACTGAGATGGGCATTCT................................................................2340.250.25---------------------------0.25--------------------------------------------------------------------------------------------
...............................................................................................................................................................AAATTTTGGTACTGAGATGGGCA....................................................................2340.250.25-----------------------------------------------------------------------------0.25------------------------------------------
..................................................................................................................................................ATTTTTCATGGTGAAATTTTGGTACTGAGATG........................................................................3240.250.25------------------------------------------------------------------------------------------------------------0.25-----------
...................................................................................................................................................................TTTGGTACTGAGATGGGCATTC.................................................................2240.250.25---------------------------------------------------------------------------------0.25--------------------------------------
.............................................................................................................................................................TGAAATTTTGGTACTGAGA..........................................................................1940.250.25-------------------------------------------------------------------------------------------------------0.25----------------
................................................................................................................................................................AATTTTGGTACTGAGATGGGCATT..................................................................2440.250.25-----------------------------------0.25------------------------------------------------------------------------------------
..................................................................................................................................................................TTTTGGTACTGAGATGGG......................................................................1840.250.25--0.25---------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TTGGTACTGAGATGGGCATTT.................................................................2140.252.75------------------------------------------------------------------------------0.25-----------------------------------------
...............................................................................................................................................................AAATTTTGGTACTGAGATGGGCATTC.................................................................2640.250.25-----------------------------------------------------------------------------------------------------------------0.25------
.................................................................................................................................................................ATTTTGGTACTGAGATGGGCAT...................................................................2240.250.25---------------------------------------------------------------------------------------------------0.25--------------------
..............................................................................................................................................................GAAATTTTGGTACTGAGATGGGCATT..................................................................2640.250.25---------------------------------0.25--------------------------------------------------------------------------------------
....................................................................................................................................................................TTGGTACTGAGATGGGCATAA.................................................................2140.250.75------------------------------------------------------------------------------------------------------------------0.25-----
..................................................................................................................................................................TTTTGGTACTGAGATGGGCA....................................................................2040.250.25----------------------------------------------------------------------------------------------------0.25-------------------
...................................................................................................................................................TTTTTCATGGTGAAATTTTGGTACTGAG...........................................................................2840.250.25--------------------------------------------------------------------------------------------0.25---------------------------
....................................................................................................................................................................TTGGTACTGAGATGGGCA....................................................................1840.250.25---------------------------------------------------------------------------------------------------------------0.25--------
.............................................................................................................................................................TGAAATTTTGGTACTGAGATGGGCA....................................................................2540.250.25---------------0.25--------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TTGGTACTGAGATGGGCATTCT................................................................2240.250.25--------------------------------------------------------------------------0.25---------------------------------------------
..............................................................................................................................................................GAAATTTTGGTACTGAGATGGGC.....................................................................2340.250.25-------------------------------------0.25----------------------------------------------------------------------------------
..................................................................................................................................................................TTTTGGTACTGAGATGGGCATTCT................................................................2440.250.25--0.25---------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................AAATTTTGGTACTGAGATGGGCATTCTCT..............................................................2940.250.25---0.25--------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................AATTTTGGTACTGAGATGGGCA....................................................................2240.250.25----------------------------------------------------------------------------------------------------------------0.25-------
................................................................................................................................................................AATTTTGGTACTGAGATGG.......................................................................1940.250.25---------------------------------------------------------------------------------------------------------------------0.25--
...........................................................................................................................................................GGTGAAATTTTGGTACTGAGAT.........................................................................2240.250.25---------------------------------------------------------------------------------------------------------0.25--------------
..........................................................ATTTATGGTAAGCTTTCTT.............................................................................................................................................................................1940.250.25--------------------------------------------------------------------------------------------------------------0.25---------
......................................................................................................................................................................................................AGTACCACTCCAAAG.....................................1550.200.20-----------------------------------------------------------------------------------------------------------------------0.20
....................................................................................................................................................................TTGGTACTGAGATGGGC.....................................................................1750.200.20---------------0.20--------------------------------------------------------------------------------------------------------
................................................................................................................................................................................TGGGCATTCTCTGTAC..........................................................1690.110.11--------------------------------------------------------------------------0.11---------------------------------------------

Antisense strand
TTACTGCTGTACACAGGATGTTGTATAATATTTTGTAAAGCCTGTTGTTTTTGGAAGTATTTATGGTAAGCTTTCTTAAAAATTATTATGGTAAATACTTCTGAAATCCGGCGTACTTTTCTTTAAGCTTTGTCATTTCTGTTATGATTTTTCATGGTGAAATTTTGGTACTGAGATGGGCATTCTCTGTACCTTTATAGTACCACTCCAAAGGCAAGGAACCATGATTGACAACAGTCAAGCTGTGGAT
...............................................................................................(((..(((.....))).)))...........(((....((((((.((...((..((((.....))))..))...)).))))))))).....................................................................
.........................................................................................90...........................................................................................183.................................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		TAX577740(Rovira)
total RNA. (breast)		SRR343335SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189782SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR343334SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR038855(GSM458538)
D10. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532929(GSM532929)
G702N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
........................................CCTGTTGTTTTTGGATTGT............................................................................................................................................................................................... 191.000.00-------------------------1.00----------------------------------------------------------------------------------------------
....................................................................................................AAAAGTACGCCGGATTTCAG.................................................................................................................................. 2011.001.00----------------------1.00-------------------------------------------------------------------------------------------------
...............GGATGTTGTATAATAATTT........................................................................................................................................................................................................................ 191.000.00-------------------------------------------------------------------------1.00----------------------------------------------