ID: uc001put.2_intron_14_0_chr11_118922664_r
GENE: HYOU1(9)
chr11:118922614-118922851-


(2)
AGO2.ip
(3)
B-CELL
(4)
BREAST
(12)
CELL-LINE
(8)
HEART
(1)
KIDNEY
(2)
LIVER
(2)
OTHER
(17)
SKIN
(1)
TESTES

Sense strand
GCCACTCGGGTCCCCAGAGTTCAGGAGGTGCTGCTGAAGGCCGTGGGCAAGTGAGTGTGGGGGCTAGAGCGCTTGGCTGAGTTCTGCCTGGGGCAGGGCTTTGGGCTGAGCAGCTGGAGGGCTGAGGGGAGGGAAGTCCCGGTTGCATGCTCCAGGGTAGACCGTGCTGAGGCTTGGGGCTTTCCCAGGGAGGAGCTGGGGAAGAACATCAATGCAGATGAAGCAGCCGCCATGGGGG
.......................................................................................((((((..((((((..((((...((((.((((.((....((((......))))....))...)))).((.....))..)))).))))..))))))))))))..................................................
....................................................................................85.....................................................................................................188................................................
SizePerfect hitTotal NormPerfect NormSRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR189784SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189782SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR029129(GSM416758)
SW480. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR191471(GSM715581)
119genomic small RNA (size selected RNA from . (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
.......................................................................................................................................................................TGAGGCTTGGGGCTTTCCCAGT.................................................22124.001.0012.0012.00---------------------------------------------------
.......................................................................................................................................................................TGAGGCTTGGGGCTTTCCCAGA.................................................2218.001.004.004.00---------------------------------------------------
....................................................................................................................................................................................................TGGGGAAGAACATCAATGCAGATGAAGCAGC...........3113.003.00--3.00--------------------------------------------------
....................................................................................................................................................................TGCTGAGGCTTGGGGCTTTCCCAG..................................................2413.003.00---3.00-------------------------------------------------
.....................CAGGAGGTGCTGCTGAAGG......................................................................................................................................................................................................1912.002.00----2.00------------------------------------------------
.......................................................................................................................................................................TGAGGCTTGGGGCTTTCCCAGTAAT..............................................2512.001.001.001.00---------------------------------------------------
.......................................................................................................................................................................TGAGGCTTGGGGCTTTCCCAGTAT...............................................2411.001.00------1.00----------------------------------------------
..............CAGAGTTCAGGAGGTGCTGCTGAA........................................................................................................................................................................................................2411.001.00------------------------------------1.00----------------
......................AGGAGGTGCTGCTGAAGGCCGTG.................................................................................................................................................................................................2311.001.00-------------------------------------1.00---------------
........................................................................................................................................................................................................GAAGAACATCAATGCAG.....................1731.001.00--------------1.00--------------------------------------
........................................................................................................................................................................................................GAAGAACATCAATGCAGATGAAGCAGCCGCCAT.....3311.001.00--1.00--------------------------------------------------
...................TTCAGGAGGTGCTGCTGA.........................................................................................................................................................................................................1811.001.00---------------------------------1.00-------------------
...........CCCCAGAGTTCAGGAGGTGCTGCTGAAGGCCGTG.................................................................................................................................................................................................3411.001.00-----1.00-----------------------------------------------
.........................................................................................GGGGCAGGGCTTTGGGCCCG.................................................................................................................................201.000.00---1.00-------------------------------------------------
..............................................................................................................................................................................................................CATCAATGCAGATGAAGCAGCCGCCATGGG..3011.001.00--1.00--------------------------------------------------
.................................................................................................................................AGGGAAGTCCCGGTTGCATGCT.......................................................................................2211.001.00----------------1.00------------------------------------
.......................................................................................................................................................................TGAGGCTTGGGGCTTTCCCAGGAA...............................................241.000.00-----------------------------------1.00-----------------
.......................................................................................................................................................................................................GGAAGAACATCAATGCAGATGAAGCAGCCG.........3011.001.00------------------------1.00----------------------------
.......................................................................................................................................................................TGAGGCTTGGGGCTTTCCCAG..................................................2111.001.00-----------------1.00-----------------------------------
........................................................................................................................................................................................................GAAGAACATCAATGCAGATGAAGCAG............2611.001.00------------------------------1.00----------------------
..........................GGTGCTGCTGAAGGCCGTGGGCAAG...........................................................................................................................................................................................2511.001.00---------1.00-------------------------------------------
........................................CCGTGGGCAAGTGAGTGTGGGGGC..............................................................................................................................................................................2411.001.00----------------------1.00------------------------------
...........................................................................................................................................................................................GGGAGGAGCTGGGGATTTT................................191.000.00---------------------1.00-------------------------------
..............................CTGCTGAAGGCCGTGGGC..............................................................................................................................................................................................1811.001.00-----------------------------1.00-----------------------
.................................................................................................................................................................................................AGCTGGGGAAGAACATCAATGCAGATGAAGCAG............3311.001.00--------1.00--------------------------------------------
....................................................................................................................................................................TGCTGAGGCTTGGGGCTTTCCCAGT.................................................2511.003.00--------------------------1.00--------------------------
....................................................................................................................................................................................................TGGGGAAGAACATCAATGCAGATGAAGCAG............3011.001.00--1.00--------------------------------------------------
.....................................................AGTGTGGGGGCTAGAGTAG......................................................................................................................................................................191.000.00---------------------------1.00-------------------------
.........................................................................................................................................................................................CAGGGAGGAGCTGGGGAAGAACACTG...........................261.000.00------------------1.00----------------------------------
....................................................................................................................................................................................................TGGGGAAGAACATCAATGCAGA....................2211.001.00--1.00--------------------------------------------------
..................................................GTGAGTGTGGGGGCTAGA..........................................................................................................................................................................1811.001.00----1.00------------------------------------------------
..................................................................................................................................................................................................GCTGGGGAAGAACATCAATGCA......................2211.001.00--------------------------------1.00--------------------
.................................................................................................................................AGGGAAGTCCCGGTTGCATGCTCT.....................................................................................241.000.00--------------------1.00--------------------------------
.....................................................................................................TGGGCTGAGCAGCTGGAGGGC....................................................................................................................2111.001.00-----------------------1.00-----------------------------
..........................................................................................................................................................................................AGGGAGGAGCTGGGGAAGAACACTG...........................251.000.00----------1.00------------------------------------------
......................AGGAGGTGCTGCTGAAGG......................................................................................................................................................................................................1811.001.00----1.00------------------------------------------------
..................................................................................................................................................................................................................AATGCAGATGAAGCAGCCGCCATGGGGG2811.001.00-----1.00-----------------------------------------------
................................................................................................................................................................................................GAGCTGGGGAAGAACATCAATGC.......................2311.001.00-----1.00-----------------------------------------------
.....................................................................................................................................................................................................GGGGAAGAACATCAATGCAGATGAAGCAG............2911.001.00--------1.00--------------------------------------------
..................................TGAAGGCCGTGGGCAAG...........................................................................................................................................................................................1711.001.00------------1.00----------------------------------------
.................................................................................................................................................................................................AGCTGGGGAAGAACATCAATG........................2111.001.00----------------------------------1.00------------------
.....................CAGGAGGTGCTGCTGTAA.......................................................................................................................................................................................................181.000.00---------1.00-------------------------------------------
....................................................................................................................................GAAGTCCCGGTTGCATT.........................................................................................171.000.00------1.00----------------------------------------------
.........................................CGTGGGCAAGTGAGTGTGGGGGC..............................................................................................................................................................................2311.001.00---------------1.00-------------------------------------
..............................................................................................................................................................................................AGGAGCTGGGGAAGAACATCAATGCAGATGAAG...............3311.001.00-------------------1.00---------------------------------
.............................................................................................................................................................................................GAGGAGCTGGGGAAGATGG..............................191.000.00---1.00-------------------------------------------------
.......................................................................................................................................................................TGAGGCTTGGGGCTTTCCCAGTAGA..............................................2511.001.00-------------------------------1.00---------------------
.......................................................................................................................................................................TGAGGCTTGGGGCTTTCCCATT.................................................221.000.00------1.00----------------------------------------------
....................................................................................................................................................................................................TGGGGAAGAACATCAATGCAGATGAAGCAGT...........3111.001.00--1.00--------------------------------------------------
.......................................................................................................................................................................................................GGAAGAACATCAATG........................1580.120.12--------------------------------------------------0.12--
.............................................................................................................................................................................TTGGGGCTTTCCCAGG.................................................1690.110.11-------------------------------------------------0.11---

Antisense strand
GCCACTCGGGTCCCCAGAGTTCAGGAGGTGCTGCTGAAGGCCGTGGGCAAGTGAGTGTGGGGGCTAGAGCGCTTGGCTGAGTTCTGCCTGGGGCAGGGCTTTGGGCTGAGCAGCTGGAGGGCTGAGGGGAGGGAAGTCCCGGTTGCATGCTCCAGGGTAGACCGTGCTGAGGCTTGGGGCTTTCCCAGGGAGGAGCTGGGGAAGAACATCAATGCAGATGAAGCAGCCGCCATGGGGG
.......................................................................................((((((..((((((..((((...((((.((((.((....((((......))))....))...)))).((.....))..)))).))))..))))))))))))..................................................
....................................................................................85.....................................................................................................188................................................
SizePerfect hitTotal NormPerfect NormSRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR189784SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189782SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR029129(GSM416758)
SW480. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR191471(GSM715581)
119genomic small RNA (size selected RNA from . (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
..............CACCTCCTGAACTCTG................................................................................................................................................................................................................ 1637.007.00----------0.331.330.331.00------------------------0.670.330.330.330.330.330.330.330.330.330.33----
..............ACCTCCTGAACTCTG................................................................................................................................................................................................................. 1591.221.22-------0.11--0.110.11-0.33-------------------------0.110.11--------0.11-0.110.11
..............GCAGCACCTCCTGAACTCTG............................................................................................................................................................................................................ 2011.001.00-------1.00---------------------------------------------
.................................................................................................................................................CATGCTCCAGGGTAGTTT........................................................................... 181.000.00----------------------------1.00------------------------
..............GCACCTCCTGAACTCTG............................................................................................................................................................................................................... 1711.001.00-------1.00---------------------------------------------
..............AGCACCTCCTGAACTCTG.............................................................................................................................................................................................................. 1811.001.00-------------------------1.00---------------------------