ID: uc001pnj.3_intron_0_0_chr11_112097250_f.5p
GENE: (1)
chr11:112097200-112097449+


(4)
AGO2.ip 		(11)
B-CELL 		(4)
BRAIN 		(14)
BREAST 		(28)
CELL-LINE 		(4)
CERVIX 		(3)
HEART 		(1)
HELA 		(1)
KIDNEY 		(5)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(30)
SKIN 		(2)
UTERUS

Sense strand
GCACAAGTGTCCCGCCGCATCTCCTTCAGCGCGAGCCACCGATTGTACAGGTAGGGTGTGCACACAGGTACAGCGGCGGGCGGTGGGCGCCGGGCCCCGGAACGTCACCGGGGCGGGGCCGGCGGGCGTGCTGACGTCGGGCCCGGGAGGGGCGCGGGGGCTGCTGGGGCGACGCGCGCTGGTCGGCTTCGTGGGGCTTCGGACGGCCTCCAGCATCCTGATGGGGGCTGGAGTGTCCCCAGCCCTGGAG
.........................................................................................................................................((.((((.....)))).))((((((((((..((..((((.(((....)))..))))..))..))).)))))))........................................
.................................................................................................................................130.............................................................................210......................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR037943(GSM510481)
293DcrTN. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532880(GSM532880)
G659T. (cervix)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR040027(GSM532912)
G220T. (cervix)		SRR029125(GSM416754)
U2OS. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040036(GSM532921)
G243N. (cervix)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		GSM339994(GSM339994)
hues6. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577742(Rovira)
total RNA. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577453(Rovira)
total RNA. (breast)		SRR040024(GSM532909)
G613N. (cervix)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)
......................................................................................................................................CGTCGGGCCCGGGAGAG...................................................................................................1723.000.00-18.00------------------------------------------------1.00-------------------1.00------1.00--1.00-------------------1.00------
.....................................................................................................................................................................................................................CATCCTGATGGGGGCTGGAG.................2017.007.00----7.00------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................GTCGGCTTCGTGGGGC.....................................................1616.006.00---3.00-------3.00-----------------------------------------------------------------------------------------------
.......................................................................................................................................................................................CGGCTTCGTGGGGCTTCGGACGG............................................2316.006.00-----6.00-----------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................GCTTCGTGGGGCTTCGGA...............................................1814.004.00---1.00--1.00--------------------1.00-1.00-----------------------------------------------------------------------------
....................................................................................................................................................................................................................GCATCCTGATGGGGGCTGGAG.................2114.004.00----4.00------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................GCTTCGTGGGGCTTCGGACGG............................................2114.004.00-----2.00--1.00----1.00---------------------------------------------------------------------------------------------
.............................................................................................................................................................................GCGCGCTGGTCGGCTTCG...........................................................1814.004.00--------1.00-3.00------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................CGTGGGGCTTCGGACGGC...........................................1814.004.00---1.00-1.002.00----------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................CGGACGGCCTCCAGCATC.................................1814.004.00-------------------------2.00------------------1.00-----------1.00--------------------------------------------------
.......................................................................................................................................................................................................................TCCTGATGGGGGCTGGAG.................1813.003.00--------1.00-------------------2.00------------------------------------------------------------------------------
...............................................................................................................................................................................................TGGGGCTTCGGACGGCCTCCAGC....................................2313.003.00------------3.00----------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................GCATCCTGATGGGGGCTGGAGT................2212.002.00-------------------------------------------------------1.00----1.00----------------------------------------------
........................................................................................................................................................................GCGACGCGCGCTGGTCGG................................................................1812.002.00-----------------------1.00-------------------------------------------------------------1.00---------------------
.......................................................................................................................................................................................................CGGACGGCCTCCAGCATCC................................1912.002.00---------2.00-------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................ATCCTGATGGGGGCTGGAG.................1912.002.00---------------------------------1.00------------------------------------------------------------1.00------------
..........................................................................................................................................................................................CTTCGTGGGGCTTCGGACGGC...........................................2112.002.00----------------------------------------------1.00----------------------------------------------1.00-------------
..................................................................................................................................................................................CTGGTCGGCTTCGTGGGGCTT...................................................2112.002.00------------------1.00-----------------1.00----------------------------------------------------------------------
...........................................................................................................................................................................................TTCGTGGGGCTTCGGACGGC...........................................2012.002.00-----------------2.00-----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................CTGATGGGGGCTGGAGTGT..............1912.002.00------------------------2.00----------------------------------------------------------------------------------
...........................................................................................................................................................................................TTCGTGGGGCTTCGGACGG............................................1912.002.00---1.00--------------------------1.00----------------------------------------------------------------------------
..................................................................................................................................................................................CTGGTCGGCTTCGTGGGG......................................................1812.002.00------------------1.00----1.00-----------------------------------------------------------------------------------
.....................................................................................................................................................................................................TTCGGACGGCCTCCAGCATC.................................2012.002.00---------------1.00------------------------------------------------------------------------1.00------------------
..........................................................................................................................................................................................................................TGATGGGGGCTGGAGTGT..............1812.002.00--------------------------------2.00--------------------------------------------------------------------------
...................................................................................................................................................................................................GCTTCGGACGGCCTCCAG.....................................1812.002.00---------------------------------------1.00------------------------1.00------------------------------------------
..................................................................................................................................................................................CTGGTCGGCTTCGTGGGGCTTCGGA...............................................2512.002.00-------------------------------------1.00------------------------------1.00--------------------------------------
....................................................................................................................................................................................................................................TGGAGTGTCCCCAGCCC.....1712.002.00---1.00------------------------------------------------------------------------1.00------------------------------
.................................................................................................................................................................................GCTGGTCGGCTTCGTGGGGCTTCG.................................................2412.002.00---2.00-------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................CGTGGGGCTTCGGACG.............................................1612.002.00---2.00-------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................ACGCGCGCTGGTCGGCTTCG...........................................................2012.002.00--------------------------1.00--------------------------1.00-----------------------------------------------------
.................................................................................................................................................................................GCTGGTCGGCTTCGTGGGG......................................................1912.002.00------1.00-----------------------------------------------------------1.00----------------------------------------
...................................................................................................................................................................................TGGTCGGCTTCGTGGGG......................................................1711.001.00---1.00-------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................GGCTTCGTGGGGCTTCGGAC..............................................2011.001.00-----------------------------------------------------------------1.00-----------------------------------------
.......................................................................................................................................................................................CGGCTTCGTGGGGCTTCGGACGGCCTCCAG.....................................3011.001.00-------------1.00---------------------------------------------------------------------------------------------
........................TTCAGCGCGAGCCACCGATTGTACAGTAA.....................................................................................................................................................................................................291.000.00----------------------------------1.00------------------------------------------------------------------------
.....................................................................................................................................................................................................TTCGGACGGCCTCCAGAA...................................181.000.00--------1.00--------------------------------------------------------------------------------------------------
..............................................................................................................................................................................CGCGCTGGTCGGCTTCGTGGG.......................................................2111.001.00--------------1.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................GACGGCCTCCAGCATCC................................1711.001.00------------------------------------------------------------------------------1.00----------------------------
...........................................................................................................................................................................ACGCGCGCTGGTCGGCTTC............................................................1911.001.00----------------------------------------------------------1.00------------------------------------------------
...............................................................................................................................................................................GCGCTGGTCGGCTTCGTGGGG......................................................2111.001.00------1.00----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................CGTGGGGCTTCGGACGGCCT.........................................2011.001.00---------------------------------------------------------------------------------------------------1.00-------
..........................................................................................................................................................................................................................TGATGGGGGCTGGAG.................1501.001.00-------------------------------------------1.00---------------------------------------------------------------
......................................................................................................................................................................................TCGGCTTCGTGGGGCTTCGGACGGCCT.........................................2711.001.00------------------------------------------------------------------------------------------1.00----------------
...............................................................................................................................................................................GCGCTGGTCGGCTTCGTG.........................................................1811.001.00--------------------------1.00--------------------------------------------------------------------------------
....................................................................................................................................................GGGGCGCGGGGGCTGCGGC...................................................................................191.000.00-----------------------------------1.00-----------------------------------------------------------------------
.......................................................................................................................................................................GGCGACGCGCGCTGGTCGGCTTCG...........................................................2411.001.00-----------------------------------------------------------------------1.00-----------------------------------
...........................................................................................................................................................GGGGGCTGCTGGGGCGACGCGCG........................................................................2311.001.00---------------1.00-------------------------------------------------------------------------------------------
.......................................................................................................................................................................................CGGCTTCGTGGGGCTTCGGAC..............................................2111.001.00---------------------------1.00-------------------------------------------------------------------------------
........................................................................................GCCGGGCCCCGGAACTATT...............................................................................................................................................191.000.00---------------------------------------------------------------1.00-------------------------------------------
...................................................................................................................................................................................TGGTCGGCTTCGTGGGGCTTCG.................................................2211.001.00-------------------------------------------------------------------------1.00---------------------------------
..........................................................................................................................................................................................................ACGGCCTCCAGCATCCTGATG...........................2111.001.00---------------------------------------------------------------------------1.00-------------------------------
......................................................................................................................................................................................................TCGGACGGCCTCCAGCATCCTGATGG..........................2611.001.00----------------------1.00------------------------------------------------------------------------------------
..................................................................................................................................................................................CTGGTCGGCTTCGTGGGGC.....................................................1911.001.00---1.00-------------------------------------------------------------------------------------------------------
...............................................................................................................................................CGGGAGGGGCGCGGGGGCCTTA.....................................................................................221.000.00-------------------------------------------------------------1.00---------------------------------------------
........................................................................................................................................................................................................................CCTGATGGGGGCTGGAGTG...............1911.001.00------1.00----------------------------------------------------------------------------------------------------
............................................................................................................................................................................CGCGCGCTGGTCGGCGTG............................................................181.000.00-------------------------------1.00---------------------------------------------------------------------------
....................................................................................................................................GACGTCGGGCCCGGG.......................................................................................................1511.001.00--------------------------------------1.00--------------------------------------------------------------------
........................................................................GCGGCGGGCGGTGGGGCGG...............................................................................................................................................................191.000.00-----------------------------------------------------------1.00-----------------------------------------------
....................................................................................................................GGCCGGCGGGCGTGCGC.....................................................................................................................171.000.00-------------------1.00---------------------------------------------------------------------------------------
...........................................................................................................................................................................ACGCGCGCTGGTCGGCTT.............................................................1811.001.00-----------------------------------------------------------------------------------------------------1.00-----
.............................................................................................................................................CCCGGGAGGGGCGCGCCG...........................................................................................181.000.00----------------------------------------1.00------------------------------------------------------------------
..........................................................................................................................................................................................CTTCGTGGGGCTTCGGACGG............................................2011.001.00--------------------------------------------------------------------------1.00--------------------------------
..............................................................................................................................................................................CGCGCTGGTCGGCTTCGTGGGG......................................................2211.001.00--------------1.00--------------------------------------------------------------------------------------------
.....................................................................ACAGCGGCGGGCGGTGGGCG.................................................................................................................................................................2011.001.00-------1.00---------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................CGGCTTCGTGGGGCTTCGGACGGC...........................................2411.001.00-------1.00---------------------------------------------------------------------------------------------------
...............................................................................................................................................................................GCGCTGGTCGGCTTCGTGGGGCTTCGGACGGCCT.........................................3411.001.00---------------------------------------------------------------------------------------1.00-------------------
.....................................................................................................................................................................................................TTCGGACGGCCTCCAGC....................................1711.001.00-------1.00---------------------------------------------------------------------------------------------------
..............................................................................................................................................CCGGGAGGGGCGCGGGGGCA........................................................................................201.000.001.00----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................GCATCCTGATGGGGGCTCGAG.................211.000.00----1.00------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................ACGGCCTCCAGCATCCTGA.............................1911.001.00---------------------------------------------------1.00-------------------------------------------------------
.................................................................AGGTACAGCGGCGGGTTTT......................................................................................................................................................................191.000.00--------------------1.00--------------------------------------------------------------------------------------
..................................................................................................................GGGGCCGGCGGGCGTGCA......................................................................................................................181.000.00-------------------1.00---------------------------------------------------------------------------------------
.................................................................AGGTACAGCGGCGGGGTGT......................................................................................................................................................................191.000.00--------------------1.00--------------------------------------------------------------------------------------
..............................GCGAGCCACCGATTGTACAG........................................................................................................................................................................................................2011.001.00-------1.00---------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................GTCGGCTTCGTGGGGCTTCGGACGG............................................2511.001.00----------------------------------------------------------------------------------1.00------------------------
.......................................................................................................................................................................................CGGCTTCGTGGGGCTTCGGACA.............................................2211.001.00------------------------------------------------------------------------------------------------1.00----------
...................................................................................................................................................................................................................AGCATCCTGATGGGGGCTGGAG.................2211.001.00-----------------------------1.00-----------------------------------------------------------------------------
.......................................................................................................................................................................................CGGCTTCGTGGGGCTTCGGACAA............................................2311.001.00----------------------1.00------------------------------------------------------------------------------------
..................................................................................................GGAACGTCACCGGGGCGGGGCC..................................................................................................................................2211.001.00-----------------------------------------------------------------------------------1.00-----------------------
...................................................................................................................................................................................TGGTCGGCTTCGTGGGGC.....................................................1811.001.00-------------------------------------------------------------------------------------------1.00---------------
.................................................................................................................................................................................GCTGGTCGGCTTCGTGGGGC.....................................................2011.001.00--------------------------------------------------------------------------------------1.00--------------------
..................................................................................................................................................................................CTGGTCGGCTTCGTGGGGCT....................................................2011.001.00--------------------------------------------------------------------------------------------1.00--------------
.........................................................................................................................................CGGGCCCGGGAGGGGATG...............................................................................................181.000.00-------------------------------1.00---------------------------------------------------------------------------
................................................................................................................GCGGGGCCGGCGGGCGTGCT......................................................................................................................2011.001.00--------------1.00--------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................TTCGGACGGCCTCCATCAT..................................191.000.00---------1.00-------------------------------------------------------------------------------------------------
................................................................................................................................................................................CGCTGGTCGGCTTCGTGG........................................................1811.001.00-------------------------------------------------1.00---------------------------------------------------------
.....................................................................................................................................................................................GTCGGCTTCGTGGGGCTTC..................................................1911.001.00----------------------------------------------------1.00------------------------------------------------------
.......................................................................................................................................GTCGGGCCCGGGAGGG...................................................................................................1620.500.50------------------------------------------------------------------------------------------------------0.50----
....................................................................................................................................................................................................................................TGGAGTGTCCCCAGCC......1620.500.50---------------------------------0.50-------------------------------------------------------------------------
...............................................................................................................................................CGGGAGGGGCGCGGGGG..........................................................................................1740.500.50----------------------------------0.25---------------------------------------------------------------------0.25--
.........................................................................................................................................CGGGCCCGGGAGGGGCCGG..............................................................................................1930.330.330.33----------------------------------------------------------------------------------------------------------
.........................................................................................................................................CGGGCCCGGGAGGGGC.................................................................................................1630.330.33---------------0.33-------------------------------------------------------------------------------------------
.........................................................................................................................................CGGGCCCGGGAGGGGCCGC..............................................................................................1930.330.33-------------------------------------------------------------------------------------------------------0.33---
................................................................................................................................................GGGAGGGGCGCGGGGGC.........................................................................................1750.200.20---------------------------------------------------------------------------------------------------------0.20-
.........................................................................................................................................................................................................................CTGATGGGGGCTGGAG.................1680.120.12----------------------------------------------------------------------------------------------------------0.12

Antisense strand
GCACAAGTGTCCCGCCGCATCTCCTTCAGCGCGAGCCACCGATTGTACAGGTAGGGTGTGCACACAGGTACAGCGGCGGGCGGTGGGCGCCGGGCCCCGGAACGTCACCGGGGCGGGGCCGGCGGGCGTGCTGACGTCGGGCCCGGGAGGGGCGCGGGGGCTGCTGGGGCGACGCGCGCTGGTCGGCTTCGTGGGGCTTCGGACGGCCTCCAGCATCCTGATGGGGGCTGGAGTGTCCCCAGCCCTGGAG
.........................................................................................................................................((.((((.....)))).))((((((((((..((..((((.(((....)))..))))..))..))).)))))))........................................
.................................................................................................................................130.............................................................................210......................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR037943(GSM510481)
293DcrTN. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532880(GSM532880)
G659T. (cervix)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR040027(GSM532912)
G220T. (cervix)		SRR029125(GSM416754)
U2OS. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040036(GSM532921)
G243N. (cervix)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		GSM339994(GSM339994)
hues6. (cell line)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577742(Rovira)
total RNA. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577453(Rovira)
total RNA. (breast)		SRR040024(GSM532909)
G613N. (cervix)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)
..............................................................................GGCGGTGGGCGCCGGGGGGG........................................................................................................................................................ 2035.000.0024.00-10.00--------------------------------------------------------------------------------------1.00-----------------
..............................................................................GGCGGTGGGCGCCGGGGGG......................................................................................................................................................... 1914.000.0010.00-4.00--------------------------------------------------------------------------------------------------------
..............................................................................GGCGGTGGGCGCCGGGGG.......................................................................................................................................................... 187.000.006.00-1.00--------------------------------------------------------------------------------------------------------
......................................................................................................CGTCACCGGGGCGGGGGGGG................................................................................................................................ 204.000.001.00-----------------------------------------1.00-----------------------------1.00------1.00---------------------------
..............................................................................GGCGGTGGGCGCCGGGTGGG........................................................................................................................................................ 204.000.003.00-1.00--------------------------------------------------------------------------------------------------------
......................................................................................................CGTCACCGGGGCGGGGGG.................................................................................................................................. 183.000.00---------------------1.00---------------------------------------------1.00------------------------------1.00--------
......................................................................................................CGTCACCGGGGCGGGGGGG................................................................................................................................. 193.000.00---------------------1.00--------------------------------------------------------------1.00------------1.00---------
......................................................................................................CGTCACCGGGGCGGGGG................................................................................................................................... 172.000.00---------------------------------------------------------1.00-----------------------1.00-------------------------
.....................ATCGGTGGCTCGCGCTGAAGGA............................................................................................................................................................................................................... 2212.002.00----------------2.00------------------------------------------------------------------------------------------
...........................................................................GCGGGCGGTGGGCGCCGGG............................................................................................................................................................ 191.000.00-----------------------------------------------------------------------------------------------1.00-----------
.....GAGATGCGGCGGGACACT................................................................................................................................................................................................................................... 1811.001.00---------------------------------------------------------------------1.00-------------------------------------
.................CTCGCGCTGAAGGAGATG....................................................................................................................................................................................................................... 1811.001.00-----------------------------------------1.00-----------------------------------------------------------------
......................CCTTCAGCGCGAGCCACC.................................................................................................................................................................................................................. 181.000.00------------------------------1.00----------------------------------------------------------------------------
.......AGGAGATGCGGCGGGACA................................................................................................................................................................................................................................. 1811.001.00--------------------------------------------------------------1.00--------------------------------------------
......................................................................CAGCGGCGGGCGGTGGCGG................................................................................................................................................................. 191.000.001.00----------------------------------------------------------------------------------------------------------
...........................................................................GCGGGCGGTGGGCGCCGGGG........................................................................................................................................................... 201.000.00---------------------------------------------1.00-------------------------------------------------------------
......................................................................................................CGTCACCGGGGCGGGGGGG................................................................................................................................. 191.000.00-----------------------------------------------1.00-----------------------------------------------------------
.................................................GGTAGGGTGTGCACAGA........................................................................................................................................................................................ 171.000.00------------------------------------------------1.00----------------------------------------------------------
........................................................................................................................................................................................GGCTTCGTGGGGCTTCTGAG.............................................. 201.000.00-------------1.00---------------------------------------------------------------------------------------------
..............................................................................GGCGGTGGGCGCCGGGCGG......................................................................................................................................................... 191.000.00------------------------------------------------------1.00----------------------------------------------------
..............................................................................GGCGGTGGGCGCCGGGGGGC........................................................................................................................................................ 201.000.001.00----------------------------------------------------------------------------------------------------------
..............................................................................................................CGCCCGCCGGCCCCGCCC.......................................................................................................................... 1850.200.200.20----------------------------------------------------------------------------------------------------------