ID: uc001pmo.2_intron_1_0_chr11_111897024_f.5p
GENE: (2)
chr11:111896974-111897223+


(1)
AGO1.ip
(1)
AGO2.ip
(1)
B-CELL
(4)
BRAIN
(5)
BREAST
(22)
CELL-LINE
(2)
CERVIX
(4)
HEART
(2)
HELA
(2)
LIVER
(2)
OTHER
(1)
RRP40.ip
(7)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
GGGAAAAAAAAGAGGGGGACAAAATCAATGAAGGTGACCTAATTGCAGAGGTAAGTTTTTTTTTTTTTTTTTAATTAATTTATTTATTTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGATCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTA
..................................................(((((((..((...........))..))))))).............(((((....((..((.((((((...)))))).))..))...)))))............................................................................................................
..................................................51...........................................................................................144........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR037936(GSM510474)
293cand1. (cell line)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040037(GSM532922)
G243T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
GSM956925PAZD5TAX577740(Rovira)
total RNA. (breast)
SRR189785SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040043(GSM532928)
G428T. (cervix)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR038853(GSM458536)
MELB. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038856(GSM458539)
D11. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR029125(GSM416754)
U2OS. (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
...................................................TAAGTTTTTTTTTTTTTTTGGGT................................................................................................................................................................................239.000.005.004.00------------------------------------------------------
...........GAGGGGGACAAAATC................................................................................................................................................................................................................................1564.674.67----------4.67---------------------------------------------
...................................................TAAGTTTTTTTTTTTTTTTGGGC................................................................................................................................................................................234.000.003.001.00------------------------------------------------------
....................................................AAGTTTTTTTTTTTTTTTTTAAGC..............................................................................................................................................................................243.000.003.00-------------------------------------------------------
...................................................TAAGTTTTTTTTTTTTTGGGT..................................................................................................................................................................................213.000.001.002.00------------------------------------------------------
.........................................................................................................................................................TGGAGGGAAGGTCAGCAGATAAACAAGCGA...................................................................303.000.001.002.00------------------------------------------------------
...................................................TAAGTTTTTTTTTTTTTTTTTCGGG..............................................................................................................................................................................253.000.003.00-------------------------------------------------------
......................................................................................................................GCAGAGGGGGATTTGGCAGGGGC.............................................................................................................232.000.00-2.00------------------------------------------------------
...............................................................................................................................................AGGACAATAGTGGAGGGA.........................................................................................1802.002.00--2.00-----------------------------------------------------
....................................................................................................................................................................................TGAACAAAGGTCTCTGGTTCCC................................................222.000.002.00-------------------------------------------------------
...................................................................................TTATTTTTTTTATTGATCATTCTCGG.............................................................................................................................................262.000.001.001.00------------------------------------------------------
...................................................TAAGTTTTTTTTTTTTTGGGC..................................................................................................................................................................................212.000.001.001.00------------------------------------------------------
..............................................................................................................................................................................AACAAGTGAACAAAGGTCTCTGGTCCTC................................................282.000.00-2.00------------------------------------------------------
...................................................................................................................................TGGCAGGGTCATAGGACAATAGTGGAGT...........................................................................................282.000.00---2.00----------------------------------------------------
...................................................TAAGTTTTTTTTTTTTTGGG...................................................................................................................................................................................202.000.001.001.00------------------------------------------------------
............................................................TTTTTTTTTTTTAATTAATTTAAATG....................................................................................................................................................................262.000.00-----2.00--------------------------------------------------
.....................................................................................................................................................ATAGTGGAGGGAAGGTCAGCAGGCA............................................................................252.000.00-2.00------------------------------------------------------
........................................................................................................................AGAGGGGGATTTGGCAGGGGC.............................................................................................................212.000.00-2.00------------------------------------------------------
.............................................................................................................................GGGATTTGGCAGGGTCATAGGACAATAGTGG..............................................................................................3101.001.00--1.00-----------------------------------------------------
..........................................................................TTAATTTATTTATTTTTTTTAACG........................................................................................................................................................241.000.00-----------1.00--------------------------------------------
...............................................................................................................................................................GAAGGTCAGCAGATAAACAAGTGAACTCTG.............................................................301.000.00-------------1.00------------------------------------------
...................................................................................................................CTCGCAGAGGGGGATTTGGCAGGGGC.............................................................................................................261.000.001.00-------------------------------------------------------
.......................................................................................................................................................AGTGGAGGGAAGGTCAGCAGACC............................................................................231.000.00-1.00------------------------------------------------------
.........................................................................................................TTGGGTGTTTCTCGCAGAGGGGGC.........................................................................................................................241.000.001.00-------------------------------------------------------
.................................................................................................................................................................................AAGTGAACAAAGGTCTCTGGTTTCCC...............................................261.000.00-1.00------------------------------------------------------
.........................................................................................TTTTTATTGATCATTCTTTT.............................................................................................................................................201.000.00-----------------------------------------------------1.00--
....................................................................................................................TCGCAGAGGGGGATTTGGCAGCGCC.............................................................................................................251.000.00-1.00------------------------------------------------------
.........................................................................ATTAATTTATTTATTTTTTCAG...........................................................................................................................................................221.000.00-----1.00--------------------------------------------------
..........................AATGAAGGTGACCTAATTGCAGAGGT......................................................................................................................................................................................................2611.001.00---------------1.00----------------------------------------
...................................................................................TTATTTTTTTTATTGAGATT...................................................................................................................................................201.000.00---------1.00----------------------------------------------
...............................................................................................................................................AGGACAATAGTGGAGGGAAAA......................................................................................211.000.00---1.00----------------------------------------------------
.......................................................................................................................................................................................ACAAAGGTCTCTGGTTTTTTTT.............................................221.000.00-----------------------1.00--------------------------------
.....................................................................................................................................GCAGGGTCATAGGACAATAGTGGAGGGT.........................................................................................281.000.00---1.00----------------------------------------------------
...................................................TAAGTTTTTTTTTTTTTTTGTTT................................................................................................................................................................................231.000.001.00-------------------------------------------------------
...............................................................................................................................................AGGACAATAGTGGAGGGAATT......................................................................................211.000.00---1.00----------------------------------------------------
.................................................................TTTTTTTAATTAATTTATTTATTTTTAAG............................................................................................................................................................291.000.00-----1.00--------------------------------------------------
..............................................................................................................TGTTTCTCGCAGAGGGGGATTTGGCAGGGGC.............................................................................................................311.000.00-1.00------------------------------------------------------
..........................................................................................................................................................................................AAGGTCTCTGGTTTTTTCC.............................................191.000.001.00-------------------------------------------------------
................................................AGGTAAGTTTTTTTTTTTTTTCAAC.................................................................................................................................................................................251.000.00-1.00------------------------------------------------------
..................................................................................................................................................................................................................................CCGCAGTGTTTGTGTCCCTGG...2101.001.00-------1.00------------------------------------------------
..........................................................................................................................................................................GATAAACAAGTGAACAAAGGGCTC........................................................241.000.00--------------1.00-----------------------------------------
......................................................................................................................................................TAGTGGAGGGAAGGTCAGCAGATAAACAAGTT....................................................................321.000.00---1.00----------------------------------------------------
...........................................................TTTTTTTTTTTTTAATTAATTTTTG......................................................................................................................................................................251.000.00-----------1.00--------------------------------------------
......................................................................................................................................................TAGTGGAGGGAAGGTCAGCAGGCAA...........................................................................251.000.001.00-------------------------------------------------------
.....................................................................................................................................................ATAGTGGAGGGAAGGTCAGCAGATAAGCGA.......................................................................301.000.00-1.00------------------------------------------------------
.......................................................................................................................................................AGTGGAGGGAAGGTCAGCAAAC.............................................................................221.000.00-1.00------------------------------------------------------
.......................................................................................................................................................AGTGGAGGGAAGGTCAGCAGACAAC..........................................................................251.000.00-1.00------------------------------------------------------
........................................................................................................................................................................CAGATAAACAAGTGAACTCTG.............................................................211.000.00-------------1.00------------------------------------------
........................................................................................................................AGAGGGGGATTTGGCAGGGGGAC...........................................................................................................231.000.001.00-------------------------------------------------------
....................................................................................................................TCGCAGAGGGGGATTTGGCAGGGGC.............................................................................................................251.000.00-1.00------------------------------------------------------
....................................................................................................................................GGCAGGGTCATAGGACAAAAGC................................................................................................221.000.00------1.00-------------------------------------------------
..............................................................................................................................................TAGGACAATAGTGGAGGGGGG.......................................................................................211.000.00---1.00----------------------------------------------------
.......................................................................................................................................................AGTGGAGGGAAGGTCAGCAGATAAACAAGCGA...................................................................321.000.00-1.00------------------------------------------------------
........................................................................................................................AGAGGGGGATTTGGCAGGCCAT............................................................................................................221.000.00-1.00------------------------------------------------------
..............................................................................................................................GGATTTGGCAGGGTCATAGGACAATAGGGGA.............................................................................................311.000.00--------------------1.00-----------------------------------
.....................................................AGTTTTTTTTTTTTTTTTTAATTAGGGG.........................................................................................................................................................................281.000.00-1.00------------------------------------------------------
..........................................................................................................................AGGGGGATTTGGCAGGGGAC............................................................................................................201.000.001.00-------------------------------------------------------
............................................................................................................................................................AGGGAAGGTCAGCAGATAAACAAGTGAACAA...............................................................3101.001.00----1.00---------------------------------------------------
............................................................................................................................................CATAGGACAATAGTGGAGGGAAGATA....................................................................................261.000.00------1.00-------------------------------------------------
.......................................................................................................................................................AGTGGAGGGAAGGTCAGCAGGC.............................................................................221.000.001.00-------------------------------------------------------
.......................................................TTTTTTTTTTTTTTTTTAATTAAACAT........................................................................................................................................................................271.000.00-----------1.00--------------------------------------------
................................................................................................................................................................................................................AGAGGATCCTGCGGCTTA........................181.000.00-------------------------1.00------------------------------
...........................................................................TAATTTATTTATTTTTTTCCAG.........................................................................................................................................................221.000.00-----1.00--------------------------------------------------
..........................................................................................................TGGGTGTTTCTCGCAGAGCGGG..........................................................................................................................221.000.00-1.00------------------------------------------------------
................................................................................................................................................................AAGGTCAGCAGATAAACAAGCGA...................................................................231.000.001.00-------------------------------------------------------
........................................................................................................................................................................................CAAAGGTCTCTGGTTTTCCTAGGCAGAGGA....................................3001.001.00--1.00-----------------------------------------------------
...........................................................................................................................................TCATAGGACAATAGTGGAGGGAAGGTCA...................................................................................2801.001.00----1.00---------------------------------------------------
..............................................................................................................................................................GGAAGGTCAGCAGATAAACAAGTGAACAAAGG............................................................3201.001.00----1.00---------------------------------------------------
..........................................................................................................TGGGTGTTTCTCGCAGAGGGGGGTT.......................................................................................................................251.000.00-1.00------------------------------------------------------
....AAAAAAAGAGGGGGACTAA...................................................................................................................................................................................................................................191.000.00-----------------------------------------------1.00--------
..........................................................TTTTTTTTTTTTTTAATTAATTTATTTTA...................................................................................................................................................................291.000.00---------1.00----------------------------------------------
..................................................................................................................TCTCGCAGAGGGGGATTTGGCAGGGCA.............................................................................................................271.000.001.00-------------------------------------------------------
..................................................................................................................................................................................................................................CCGCAGTGTTTGTGTAGGG.....191.000.00----------------------------------------1.00---------------
..............................................................................................................................................TAGGACAATAGTGGAGGGAGTG......................................................................................221.000.00------------------1.00-------------------------------------
..............................................................................................................................GGATTTGGCAGGGTCATAGGACAATAGTGGAGG...........................................................................................3301.001.00--1.00-----------------------------------------------------
...................................................................................................................................TGGCAGGGTCATAGGACAATAGTGGAGGTTA........................................................................................311.000.00---1.00----------------------------------------------------
..............................................AGAGGTAAGTTTTTTTTTTTTTCTC...................................................................................................................................................................................251.000.001.00-------------------------------------------------------
...................................................................................................................................TGGCAGGGTCATAGGACAATAGTGAGGG...........................................................................................281.000.00---1.00----------------------------------------------------
.................................................................................................................TTCTCGCAGAGGGGGATTTGGCAGGGGC.............................................................................................................281.000.00-1.00------------------------------------------------------
...........................................................................................TTTATTGATCATTCTTGG.............................................................................................................................................1801.001.00----1.00---------------------------------------------------
.......................................................TTTTTTTTTTTTTTTTTAATTAATTAAG.......................................................................................................................................................................281.000.00-----1.00--------------------------------------------------
....................................................................................................................................GGCAGGGTCATAGGACAATAGTGTAAT...........................................................................................271.000.00--------------------------1.00-----------------------------
......................AATCAATGAAGGTGACC...................................................................................................................................................................................................................1711.001.00----------------------------------------------1.00---------
...............GGGACAAAATCAATGAAG.........................................................................................................................................................................................................................1811.001.00------------------------------------1.00-------------------
..........................AATGAAGGTGACCTAATT..............................................................................................................................................................................................................1811.001.00---------------1.00----------------------------------------
................................................AGGTAAGTTTTTTTTTTTTTTTTTTTTC..............................................................................................................................................................................281.000.001.00-------------------------------------------------------
.....................................................................................................................................................................................GAACAAAGGTCTCTGGAA...................................................181.000.00-------1.00------------------------------------------------
.......................................................................................................................CAGAGGGGGATTTGGCACGGC..............................................................................................................211.000.00--------------------------------------1.00-----------------
...............................................................................................................................................................................................CTCTGGTTTTCCTAGGCAGAGGATCCTGA..............................291.000.00---------------------------------1.00----------------------
..............................................................................................................................................TAGGACAATAGTGGA.............................................................................................1501.001.00--1.00-----------------------------------------------------
...............................................................................................................................................................................ACAAGTGAACAAAGGTCTCTGGGTC..................................................251.000.001.00-------------------------------------------------------
.........................................................................................................TTGGGTGTTTCTCGCAGAGGGGGATTTG.....................................................................................................................2801.001.00----1.00---------------------------------------------------
...................................................TAAGTTTTTTTTTTTTTTTTTGGGG..............................................................................................................................................................................251.000.001.00-------------------------------------------------------
...................................................................................................................CTCGCAGAGGGGGATCGC.....................................................................................................................181.000.00-------------1.00------------------------------------------
..................................................................................................................TCTCGCAGAGGGGGAAGG......................................................................................................................181.000.00---------------------------------------------1.00----------
......................................................................................................................................CAGGGTCATAGGACAATAGC................................................................................................201.000.00------------1.00-------------------------------------------
.............................................................................................................................GGGATTTGGCAGGGTCATAGGACAATAGTGGAG............................................................................................3301.001.00----1.00---------------------------------------------------
..................................................................................................................................................................................AGTGAACAAAGGTCTCTGGTA...................................................211.000.00---------------------------1.00----------------------------
........................................................................................................................AGAGGGGGATTTGGCAGGGGACA...........................................................................................................231.000.00-1.00------------------------------------------------------
..........................................................................................................TGGGTGTTTCTCGCAGAGGGGGAAA.......................................................................................................................251.000.00---------------------------------------------------1.00----
..................................................................TTTTTTAATTAATTTATTGGT...................................................................................................................................................................211.000.00---------1.00----------------------------------------------
...........................................................................................................................GGGGGATTTGGCAGGGTCATAGGCCA.....................................................................................................261.000.00------------------------1.00-------------------------------
..................................................................................................................................................................................AGTGAACAAAGGTCTCTGGCTC..................................................221.000.00-1.00------------------------------------------------------
.GGAAAAAAAAGAGGGGGTT......................................................................................................................................................................................................................................191.000.00----------------------------------------------------1.00---
.....................................................................................................................................................ATAGTGGAGGGAAGGTCAGCAGACCA...........................................................................261.000.00-1.00------------------------------------------------------
.................................................................................ATTTATTTTTTTTATTGATCACTC.................................................................................................................................................241.000.001.00-------------------------------------------------------
.................................................................................ATTTATTTTTTTTATTGATCATTCTCGG.............................................................................................................................................281.000.001.00-------------------------------------------------------
.....................................................................................................................................................ATAGTGGAGGGAAGGCAGC..................................................................................191.000.001.00-------------------------------------------------------
..................................................................................................................TCTCGCAGAGGGGGATTTGGCAGGGTCTCG..........................................................................................................301.000.00---------1.00----------------------------------------------
...................................................................................................................................................CAATAGTGGAGGGAAGGTCAGCAGATAAAAAA.......................................................................321.000.00-------------------------------------------1.00------------
............................................................................................................................................................AGGGAAGGTCAGCAGATAAACAAGCGA...................................................................271.000.00-1.00------------------------------------------------------
.................................................GGTAAGTTTTTTTTTTTTTTTTA..................................................................................................................................................................................231.000.001.00-------------------------------------------------------
......................................................................................................................................CAGGGTCATAGGACAATAGTGGAGGGTA........................................................................................281.000.00---------1.00----------------------------------------------
.................................................................................................................................TTTGGCAGGGTCATAGGACAATAGTGGAGT...........................................................................................301.000.00---1.00----------------------------------------------------
.........................................................TTTTTTTTTTTTTTTAATTAATTTTTTG.....................................................................................................................................................................281.000.00-----1.00--------------------------------------------------
............................................................................AATTTATTTATTTTTTTTCTAT........................................................................................................................................................221.000.00---------1.00----------------------------------------------
.............................................................................................................................................................................................GTCTCTGGTTTTCCTAGGC..........................................1901.001.00-------1.00------------------------------------------------
..............................................................TTTTTTTTTTAATTAATTTAATTG....................................................................................................................................................................241.000.00----------------1.00---------------------------------------
........................................................................................................................AGAGGGGGATTTGGCAGGCCA.............................................................................................................211.000.00-1.00------------------------------------------------------
........................................................TTTTTTTTTTTTTTTTAATTAATTGG........................................................................................................................................................................261.000.00----------------1.00---------------------------------------
.............................................................................................................................................................................AAACAAGTGAACAAAGGTCTCTGTAT...................................................261.000.00------------------------------------------------1.00-------
...........................................TGCAGAGGTAAGTTTCATA............................................................................................................................................................................................191.000.00-----------------------------1.00--------------------------
....................................................................................TATTTTTTTTATTGATCATTCGGG..............................................................................................................................................241.000.00---1.00----------------------------------------------------
..........................................................................................................TGGGTGTTTCTCGCAGAGGGGGTGTT......................................................................................................................261.000.00------------------1.00-------------------------------------
..............................................................................................................................................TAGGACAATAGTGGAGGGAAGGTAT...................................................................................251.000.00---1.00----------------------------------------------------
...................................................TAAGTTTTTTTTTTTTTTTTTGGGT..............................................................................................................................................................................251.000.00-1.00------------------------------------------------------
...............................AGGTGACCTAATTGCAGAG........................................................................................................................................................................................................1911.001.00----------------------------------1.00---------------------
.........................................................................................................TTGGGTGTTTCTCGCAGAGGGGGATTTGTT...................................................................................................................3001.001.00---1.00----------------------------------------------------
.................................................................................................................................................................AGGTCAGCAGATAAACAAGTGAACTCTG.............................................................281.000.00-----------------------------------------1.00--------------
............................................................................................................................................................AGGGAAGGTCAGCAGATAAACAAACG....................................................................261.000.001.00-------------------------------------------------------
.................................................................................................................................TTTGGCAGGGTCATAGGATTGC...................................................................................................221.000.001.00-------------------------------------------------------
...................................................TAAGTTTTTTTTTTTTTTTTTCGCC..............................................................................................................................................................................251.000.00-1.00------------------------------------------------------
........AAAGAGGGGGACAAAAAAAA..............................................................................................................................................................................................................................201.000.00-------------------------------------------------1.00------
.............................................................................ATTTATTTATTTTTTTTATCG........................................................................................................................................................211.000.00-------------------1.00------------------------------------
............................................................TTTTTTTTTTTTAATTAATTTTATG.....................................................................................................................................................................251.000.00-----1.00--------------------------------------------------
.....................................................................................................................................GCAGGGTCATAGGACAATAGTGGAGGGAAGG......................................................................................3101.001.00----1.00---------------------------------------------------
...................................................................................................................................TGGCAGGGTCATAGGACAATAGGGGA.............................................................................................261.000.00---1.00----------------------------------------------------
.........................................................TTTTTTTTTTTTTTTAATTAATTTATTG.....................................................................................................................................................................281.000.00-----------1.00--------------------------------------------
...................................................................................................................................TGGCAGGGTCATAGGACAATAGTGGAGGGAAGG......................................................................................3301.001.00----1.00---------------------------------------------------
..........................................................................................................................AGGGGGATTTGGCAGTT...............................................................................................................171.000.00------------------------------1.00-------------------------
...............................................................................................TTGATCATTCTTGGGTGTTTCCTGC..................................................................................................................................251.000.00-1.00------------------------------------------------------
...................................GACCTAATTGCAGAG........................................................................................................................................................................................................1540.250.25-------------------------------------------------------0.25
.......................................................TTTTTTTTTTTTTTTTTAATTAATTT.........................................................................................................................................................................2660.170.17-------------------0.17------------------------------------
.......................................................TTTTTTTTTTTTTTTTTAATTAATTTTTTG.....................................................................................................................................................................3060.170.17-----------0.17--------------------------------------------
.......................................................TTTTTTTTTTTTTTTTTAATTAATTTTTT......................................................................................................................................................................2960.170.17-----------0.17--------------------------------------------

Antisense strand
GGGAAAAAAAAGAGGGGGACAAAATCAATGAAGGTGACCTAATTGCAGAGGTAAGTTTTTTTTTTTTTTTTTAATTAATTTATTTATTTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGATCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTA
..................................................(((((((..((...........))..))))))).............(((((....((..((.((((((...)))))).))..))...)))))............................................................................................................
..................................................51...........................................................................................144........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR037936(GSM510474)
293cand1. (cell line)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040037(GSM532922)
G243T. (cervix)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
GSM956925PAZD5TAX577740(Rovira)
total RNA. (breast)
SRR189785SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040043(GSM532928)
G428T. (cervix)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR038853(GSM458536)
MELB. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038856(GSM458539)
D11. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR029125(GSM416754)
U2OS. (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
.......................................................................................................................................................................GCAGATAAACAAGTGAACAGACC............................................................ 233.000.003.00-------------------------------------------------------
...............................................................................................................................................................................................................................GGGACACAAACACTGCGGAAG...... 2102.002.00--2.00-----------------------------------------------------
..................................................................................................................................................................................................................................AGGGACACAAACACTGCGG..... 1902.002.00--2.00-----------------------------------------------------
.........................................................................................................................................................................................................................AGGGACACAAACACTGCGGAAGGCCGCA..... 2802.002.00--2.00-----------------------------------------------------
.............................................................................................................................................................GGGAAGGTCAGCAGATAAACCAC...................................................................... 232.000.001.001.00------------------------------------------------------
...................................................................................................................................................................................................................................AGGGACACAAACACTGCG..... 1802.002.00--1.00---------1.00-------------------------------------------
.....................................................................................................................................................................................................................................ACCCAGGGACACAAACACTG. 2002.002.00--1.00-----1.00-----------------------------------------------
.................................................................................................................................................................AGGTCAGCAGATAAACACTG..................................................................... 202.000.00-----------------------------------1.00--------------1.00-----
...........................................................................................................GGGTGTTTCTCGCAGGTGC............................................................................................................................ 192.000.00-----------------2.00--------------------------------------
.............................................................................................................................................................................................TGCCTAGGAAAACCAGAGAC......................................... 2001.001.00--1.00-----------------------------------------------------
....................................................................................................................................................................................................................................GCAGTGTTTGTGTCCCTT.... 181.000.00--------1.00-----------------------------------------------
....................................................................................................................................................................................................................................CAGGGACACAAACACTGC.... 1801.001.00--1.00-----------------------------------------------------
.......................................................................................................................................................................................................................CCTGCGGCCTTCCGCAGTGTTC............. 221.000.001.00-------------------------------------------------------
.................................................................................................ACACCCAAGAATGATC......................................................................................................................................... 1601.001.00--------1.00-----------------------------------------------
......................................................................................................................................................................................AACAAAGGTCTCTGGTTTTCCTAACT.......................................... 261.000.00------1.00-------------------------------------------------
......................................................................................................................................................................................AACAAAGGTCTCTGGTTTTT................................................ 201.000.00--------------1.00-----------------------------------------
...............................................................................TAAAAAAAATAAATAA........................................................................................................................................................... 1601.001.00-------------------------------------1.00------------------
.......................................................................................................................................................AGTGGAGGGAAGGTCAGCAGATCG........................................................................... 241.000.00---------------------------------------1.00----------------
........................................................................................................................................................................................AGGAAAACCAGAGACCTTTG.............................................. 2001.001.00----1.00---------------------------------------------------
.......................................................................................................................................................AGTGGAGGGAAGGTCAGCAGATGTCC......................................................................... 261.000.001.00-------------------------------------------------------
................................................................................................................................................................................................................................GGGACACAAACACTGCGGAA...... 2001.001.00--------1.00-----------------------------------------------
.................................................................................................................................................................................................TCTGCCTAGGAAAACCAG....................................... 1801.001.00-------1.00------------------------------------------------
..........................................................................................................................................................................................................................................TTTGTGTCCCTGGGTAAA 181.000.00-------------------------------1.00------------------------
.............................................................................................................................................................................................................................GCCTTCCGCAGTGTTTTG........... 181.000.00------------------------------------------1.00-------------
..............................................................................................................................................................................................................................AGGGACACAAACACTGCGGAAGG..... 2301.001.00-------1.00------------------------------------------------
.................................................................................................................................................................................................................................AGGGACACAAACACTGCGGA..... 2001.001.00--------1.00-----------------------------------------------
.........................................ATTGCAGAGGTAAGTG................................................................................................................................................................................................. 161.000.00---------------------1.00----------------------------------
..............................................................................................................................................................................................................................CCTTCCGCAGTGTTTGTGTCCCTGC... 251.000.00------1.00-------------------------------------------------
............................................................................................................................................................................................................................GGCCTTCCGCAGTGTTTGTGTCCCTGATA. 291.000.00------1.00-------------------------------------------------
...................................................................................................TCATTCTTGGGTGTTTCTCGCACCA.............................................................................................................................. 251.000.00-1.00------------------------------------------------------
......................................................................................................................................................TAGTGGAGGGAAGGTCAGCAGATAAACACGG..................................................................... 311.000.00------1.00-------------------------------------------------
.....................................................................................................................................................................................................................................CAGTGTTTGTGTCCCTGGGTTC 221.000.00----------------------------1.00---------------------------
......................................................................................................TTCTTGGGTGTTTCTCGCAGAGGA............................................................................................................................ 241.000.00--------------------------------1.00-----------------------
.............................................................................................................................................................................................................................GCCTTCCGCAGTGTTTGTGTCCCTGGGTATGT 321.000.00---1.00----------------------------------------------------
..............................................................................................................................................................................................................................CAGGGACACAAACACTGCGGAAGG.... 2401.001.00------------1.00-------------------------------------------
....................................................................................................................................................................................................................................TACCCAGGGACACAAACACTGC 2201.001.00------------1.00-------------------------------------------
...............................................................................................................................................................................................................................GACACAAACACTGCGGAAG........ 1901.001.00--1.00-----------------------------------------------------
...................................................................................................................CCAAATCCCCCTCTGCGAG.................................................................................................................... 1901.001.00--------1.00-----------------------------------------------
..............................................................................................................................................................................................................................CCTTCCGCAGTGTTTGTGTCCCTGGGTACG 301.000.00------1.00-------------------------------------------------
...............................................................................................................................................................................................................................CTTCCGCAGTGTTTGTTGT........ 191.000.00--------------------------------------------1.00-----------
................................................................................................................................................................................................................................AGGGACACAAACACTGCGGAA..... 2101.001.00-------1.00------------------------------------------------
.............................................................................................................................................................................................................................CCCAGGGACACAAACACTGCGGAAGGC.. 2701.001.00--1.00-----------------------------------------------------
.........................................................................................................TTGGGTGTTTCTCGCAGAGTC............................................................................................................................ 211.000.00--------------1.00-----------------------------------------
............................................................................................................................................................AGGGAAGGTCAGCAGATAAAGAA....................................................................... 231.000.00----------------------1.00---------------------------------
..................................................................................................................................................................................................................................CCGCAGTGTTTGTGTCCCTGTTT. 231.000.00---1.00----------------------------------------------------
.....................TCACCTTCATTGATTT..................................................................................................................................................................................................................... 1670.290.29------------------------------------------------------0.29-