| (3) BREAST | (10) CELL-LINE | (1) CERVIX | (1) HELA | (2) LIVER | (1) OTHER | (3) SKIN |
| TGATGGCCAGGCTGATCTCAAACTCCTGGCCTCAAGCAGTCTTCCCATCTCAGCCTCTCAAAGTGTGTAGTTAAGGGCATGAACCACAGCCCATAGGTCATCTATTCTAGATAATCTATGAGAAGAGATTTGTGTTGTTGTTGTTGTTGTAAAGAAATACAGGGAGGGAATTAAACTATTTAATTTGTTTTCATTTTCAGAATACTACTATTTCTTCCAAGGATCTAACCAATTTGAATATGACTTCCTA .....................................................................................................................(((((((.(((((...(((....((.((.(((((......))))).)).)).....))).....))))).)))))))........................................................ .....................................................................................................................118.......................................................................................208........................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR015447(SRR015447) nuclear small RNAs. (breast) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | GSM1105753INPUT(GSM1105753) small RNA sequencing data. (hela) | SRR390723(GSM850202) total small RNA. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR039618(GSM531981) HBV(+) Side Tissue Sample 1. (liver) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR040009(GSM532894) G727T. (cervix) | SRR189785 | SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM956925F181A(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line) | SRR330858(SRX091696) tissue: skin psoriatic involveddisease state:. (skin) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | GSM956925Paz8D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................AAGAGATTTGTGTTGCTTC............................................................................................................. | 19 | 12.00 | 0.00 | 8.00 | - | 1.00 | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................AGAAGAGATTTGTGTTGCTT.............................................................................................................. | 20 | 12.00 | 0.00 | 10.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................GAAGAGATTTGTGTTGCT............................................................................................................... | 18 | 10.00 | 0.00 | 4.00 | 2.00 | - | - | - | - | 3.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................GAAGAGATTTGTGTTGCTT.............................................................................................................. | 19 | 8.00 | 0.00 | 5.00 | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................AAGAGATTTGTGTTGCTT.............................................................................................................. | 18 | 7.00 | 0.00 | 5.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................AGAAGAGATTTGTGTTGCTTC............................................................................................................. | 21 | 4.00 | 0.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................TTGTTGTTGTTGTTGTAAA................................................................................................. | 19 | 0 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................AAGAGATTTGTGTTGCTTT............................................................................................................. | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....GGCCAGGCTGATCTCAAAACCT................................................................................................................................................................................................................................ | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................AGAAGAGATTTGTGTTGCT............................................................................................................... | 19 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................AGAAGAGATTTGTGTTGCTTT............................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................AAGAGATTTGTGTTGTTTCT............................................................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................GAAGAGATTTGTGTTGC................................................................................................................ | 17 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................GAAGAGATTTGTGTTGATT.............................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................GTTTTCATTTTCAGAACG.............................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................AAGAGATTTGTGTTGCTTG............................................................................................................. | 19 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................AGAAGAGATTTGTGTTGCAA.............................................................................................................. | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................ATTAAACTATTTAATCTG............................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .............................CCTCAAGCAGTCTTC.............................................................................................................................................................................................................. | 15 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TTAAACTATTTAATTTGTT............................................................. | 19 | 4 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| TGATGGCCAGGCTGATCTCAAACTCCTGGCCTCAAGCAGTCTTCCCATCTCAGCCTCTCAAAGTGTGTAGTTAAGGGCATGAACCACAGCCCATAGGTCATCTATTCTAGATAATCTATGAGAAGAGATTTGTGTTGTTGTTGTTGTTGTAAAGAAATACAGGGAGGGAATTAAACTATTTAATTTGTTTTCATTTTCAGAATACTACTATTTCTTCCAAGGATCTAACCAATTTGAATATGACTTCCTA .....................................................................................................................(((((((.(((((...(((....((.((.(((((......))))).)).)).....))).....))))).)))))))........................................................ .....................................................................................................................118.......................................................................................208........................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR015447(SRR015447) nuclear small RNAs. (breast) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | GSM1105753INPUT(GSM1105753) small RNA sequencing data. (hela) | SRR390723(GSM850202) total small RNA. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR039618(GSM531981) HBV(+) Side Tissue Sample 1. (liver) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR040009(GSM532894) G727T. (cervix) | SRR189785 | SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM956925F181A(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line) | SRR330858(SRX091696) tissue: skin psoriatic involveddisease state:. (skin) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | GSM956925Paz8D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........GGCTGATCTCAAACTCCTGGAC........................................................................................................................................................................................................................... | 22 | 3.00 | 0.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......CAGGCTGATCTCAAACCGCC............................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .......CAGGCTGATCTCAAACTCCCA.............................................................................................................................................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| .........................CTGGCCTCAAGCAGTCTTCCCATG......................................................................................................................................................................................................... | 24 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................CCATCTCAGCCTCTCAAAA........................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| .......................................TCTTCCCATCTCAGCCTCTCAATGCT......................................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| ...............................................ACTTTGAGAGGCTGAGA.......................................................................................................................................................................................... | 17 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................ATCTCAGCCTCTCAACGGC......................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................GTTTTCATTTTCAGAGGC.............................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ....GGCCAGGCTGATCTCAAACTCGGCG............................................................................................................................................................................................................................. | 25 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....GCCAGGCTGATCTCAAACTCCTAGAT........................................................................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ..........GCTGATCTCAAACTCCTGGCCTGGGG...................................................................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....AGTTTGAGATCAGCCTGGCC.................................................................................................................................................................................................................................. | 20 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .............................................................................................................................................TGTTGTTGTAAAGAAACC........................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ........................AGATGGGAAGACTGCTTGAGGCCAGG........................................................................................................................................................................................................ | 26 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - |