ID: uc001ozx.3_intron_13_0_chr11_82893534_f.3p
GENE: (14)
chr11:82893880-82894129+


(1)
B-CELL
(7)
CELL-LINE
(1)
HEART
(2)
HELA
(2)
OTHER
(4)
SKIN

Sense strand
ATACTTAAATGGGCCAAGAGAAGTCAGTTTTTCAGACTCTTTAAGCATAAGGATGAAAATTTGGTTTTATCCATTTTGGGACCAAATAATTTTTGTCTTCTTTCCAAAGACTATCTTCTGGCTTAAAGTTAAAAAGAAATATCAGAATAGCCCATTAGAAATGAATACGCACATATTTACTTTTTTTCTTTTTGCTTCAGATTTATCATCCATCATGTTATGAAGATTATCAAAATGTAAGTTCTTTTTG
..................................................(((.((..(((((((((((.......))))))))))).......(((((.......)))))..)).))).((..((((..((((((((((((.......((...(((....)))....))..)))))).))))))..))))..)).......................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
.....................................................................................................................................................................................TTTTTTCTTTTTGCTTGGCG.................................................2030.000.0030.00----------------
....................................................................................................................................................................................TTTTTTTCTTTTTGCTTGGCG.................................................2126.000.0022.00-3.00----1.00---------
....................................................................................................................................AAAGAAATATCAGAATAGCCCATTAGAAATGAATACGCACATATTTACTTTTTTTCTTTTTGCTTCAG..................................................6819.009.00-9.00---------------
..............................................................................................................................................................................ATTTACTTTTTTTCTTTTAAG.......................................................212.000.00----1.00--1.00---------
............................................................................................................................................................................................................ATCATCCATCATGTTATGAAGATT......................2411.001.00---------1.00-------
..................................................................................................................................................................................ACTTTTTTTCTTTTTGCTCAAG..................................................221.000.00---1.00-------------
........ATGGGCCAAGAGAAGTCA................................................................................................................................................................................................................................1811.001.00------------1.00----
..................................................................................................................................................................................ACTTTTTTTCTTTTTGCTTTGGC.................................................231.000.00--1.00--------------
..................................................................................................................................................................................ACTTTTTTTCTTTTTGCTTTT...................................................211.000.00---1.00-------------
..............................................................................................................................................................................ATTTACTTTTTTTCTTGTG.........................................................191.000.001.00----------------
.................................................................................................................................................................................TACTTTTTTTCTTTTTGTGGG....................................................211.000.001.00----------------
..................................................................................................................................................................................ACTTTTTTTCTTTTTGCTTT....................................................201.000.00--1.00--------------
....................................................................................................................................................................................TTTTTTTCTTTTTGCTTCTGG.................................................211.000.00--1.00--------------
..........................................................ATTTGGTTTTATCCATTTTGGGACC.......................................................................................................................................................................2511.001.001.00----------------
.................................................................................................................................................................................TACTTTTTTTCTTTTTGTGAG....................................................211.000.001.00----------------
..........................................................................................................................................................................ACATATTTACTTTTTAATT.............................................................191.000.00---1.00-------------
.............................................................................................................................................................................TATTTACTTTTTTTCTTTCTTG.......................................................221.000.00----1.00------------
...........................................................................................................................................................................CATATTTACTTTTTTCACT............................................................191.000.00----1.00------------
...CTTAAATGGGCCAAGAGAAGTCAGTTTT...........................................................................................................................................................................................................................2811.001.00--------1.00--------
..................................................................................................................................................................................ACTTTTTTTCTTTTTGGAC.....................................................191.000.001.00----------------
..............................................................................................................................................................................................................CATCCATCATGTTATG............................1620.500.50--------------0.50--
............................................GCATAAGGATGAAAATT.............................................................................................................................................................................................1720.500.50-------------0.50---
......................................................................................................................................................................................................................ATGTTATGAAGATTATC...................1730.330.33---------------0.33-
..............................................................................................................................................................................ATTTACTTTTTTTCTTTTTG........................................................2050.200.20----------------0.20
..............................................................................................................................................................................ATTTACTTTTTTTCTTTTTGGAG.....................................................2350.200.200.20----------------
............................................................................................................................................................................ATATTTACTTTTTTTCTTT...........................................................1990.110.11---0.11-------------

Antisense strand
ATACTTAAATGGGCCAAGAGAAGTCAGTTTTTCAGACTCTTTAAGCATAAGGATGAAAATTTGGTTTTATCCATTTTGGGACCAAATAATTTTTGTCTTCTTTCCAAAGACTATCTTCTGGCTTAAAGTTAAAAAGAAATATCAGAATAGCCCATTAGAAATGAATACGCACATATTTACTTTTTTTCTTTTTGCTTCAGATTTATCATCCATCATGTTATGAAGATTATCAAAATGTAAGTTCTTTTTG
..................................................(((.((..(((((((((((.......))))))))))).......(((((.......)))))..)).))).((..((((..((((((((((((.......((...(((....)))....))..)))))).))))))..))))..)).......................................................
..................................................51...................................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
.....................................CCAAATTTTCATCCTTATGCTTAAAGA.......................................................................................................................................................................................... 2712.002.00------2.00----------
.............................................................................................................................AAGTTAAAAAGAAATACTAG......................................................................................................... 201.000.00-----1.00-----------
...........................................................TTTGGTTTTATCCATTTAA............................................................................................................................................................................ 191.000.00-1.00---------------
....................................................................................................................................AAAGAAATATCAGAAGTG.................................................................................................... 181.000.00-----1.00-----------
...........................TTTTTCAGACTCTTTAAAAC........................................................................................................................................................................................................... 201.000.00----------1.00------
.........................................................................................................................................................................................................................................AATGTAAGTTCTTTTTGCCA 201.000.00-----------1.00-----