uc001oss.2_intron_31_0_chr11_72425367

TGCTTCCTTTAGGCTTCGGGGAACCAGGAGGGGTTTTGGTCTGGGAGATGAGTTGAGGAGGACTGTGTGCAGGAGGGCTCCTGTCTGTGTGAGTTTGTGTAGTGCCTGAGTTTTGCTGCAGTTCAGGTGAGCTGGGGGCTCAGTATGTTTCAGTCTTGGCTCTGTTGCTTAGTGATGCCCAACTTTTGTTGTGTTCCCAGCCTGCCCACTAAGGAGGAGGAGTCATTGCTGCCATCATTATCATCCCCTC
.......................................................((.((((((....((((((....))))))(((..((....))..)))......)))))).)).((((((....)))))).(((((((.((.((..(((........)))..)).)).))).))))......................................................................
..................................................51................................................................................................................................181...................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)

SRR037943(GSM510481)
293DcrTN. (cell line)

SRR029132(GSM416761)
MB-MDA231. (cell line)

SRR037940(GSM510478)
293cand5_rep2. (cell line)

SRR037939(GSM510477)
293cand5_rep1. (cell line)

SRR037944(GSM510482)
293DcrTN_cand5. (cell line)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR037935(GSM510473)
293cand3. (cell line)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)

SRR037941(GSM510479)
293DroshaTN. (cell line)

SRR037936(GSM510474)
293cand1. (cell line)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR037937(GSM510475)
293cand2. (cell line)

SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)

SRR207111(GSM721073)
Whole cell RNA. (cell line)

SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)

SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)

SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)

SRR029126(GSM416755)
143B. (cell line)

SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)

GSM532876(GSM532876)
G547T. (cervix)

SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

SRR029128(GSM416757)
H520. (cell line)

SRR037938(GSM510476)
293Red. (cell line)

SRR553576(SRX182782)
source: Testis. (testes)

GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)

TAX577743(Rovira)
total RNA. (breast)

SRR207110(GSM721072)
Nuclear RNA. (cell line)

SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR029129(GSM416758)
SW480. (cell line)

SRR037931(GSM510469)
293GFP. (cell line)

SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)

GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)

SRR189784

SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)

SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)

SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)

SRR189787

SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR189782

SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)

SRR040039(GSM532924)
G531T. (cervix)

TAX577742(Rovira)
total RNA. (breast)

GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)

TAX577744(Rovira)
total RNA. (breast)

SRR029131(GSM416760)
MCF7. (cell line)

SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)

SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)

SRR029124(GSM416753)
HeLa. (hela)

SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)

GSM416733(GSM416733)
HEK293. (cell line)

SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)

SRR038859(GSM458542)
MM386. (cell line)

SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)

SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)

SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)

SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)

SRR029125(GSM416754)
U2OS. (cell line)

SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)

SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)

SRR343333(GSM796036)
KSHV (HHV8). (cell line)

SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)

SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)

SRR553574(SRX182780)
source: Heart. (Heart)

SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)

SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)

SRR040010(GSM532895)
G529N. (cervix)

SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)

SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)

GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)

SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)

SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)

SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)

SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)

SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)

SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)

SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)

SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR015447(SRR015447)
nuclear small RNAs. (breast)

SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)

SRR038861(GSM458544)
MM466. (cell line)

SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)

SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)

SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)

SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)

SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)

GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)

SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)

SRR037934(GSM510472)
293cand4_rep3. (cell line)

SRR038863(GSM458546)
MM603. (cell line)

SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)

SRR033731(GSM497076)
h929 Cell line (h929). (B cell)

SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)

.............................................................................................................................................................GGCTCTGTTGCTTAGTTGGC.........................................................................

213.50

0.50

58.00

10.50

12.50

9.75

10.75

8.50

9.00

5.25

6.25

7.25

6.50

6.75

3.50

5.25

2.50

0.50

3.00

2.75

2.50

1.00

0.25

2.00

1.25

1.50

1.25

1.50

0.25

1.25

0.25

1.00

1.25

0.25

1.25

1.00

0.50

0.75

0.50

0.25

0.75

0.25

0.50

0.75

0.50

0.25

.............................................................................................................................................................GGCTCTGTTGCTTAGTTGG..........................................................................

9.25

0.50

0.75

0.25

1.00

0.25

0.75

0.25

1.00

0.50

0.25

0.50

0.25

.............................................................................................................................................................GGCTCTGTTGCTTAGTTTGC.........................................................................

8.75

0.50

6.50

1.00

0.25

..............................................................................................................................................................GCTCTGTTGCTTAGTTGGC.........................................................................

6.00

0.00

1.00

3.00

1.00

.............................................................................................................................................................GGCTCTGTTGCTTAGTT............................................................................

6.00

0.50

0.25

3.25

2.50

..............................................................................................................................................................................................................CACTAAGGAGGAGGAGTCATTGC.....................

3.00

.................................................................................................................................................................................................................TAAGGAGGAGGAGTCAGA.......................

2.00

0.00

1.00

.............................................................................................................................................................GGCTCTGTTGCTTAGTTG...........................................................................

1.75

0.50

0.25

0.50

0.25

.............................................................................................................................................................GGCTCTGTTGCTTAGTTGTC.........................................................................

1.25

0.50

0.25

...............................................................................................................................................................................................................ACTAAGGAGGAGGAGTCATTGCT....................

1.00

.............................................................................................................................................................................................................................GTCATTGCTGCCATCATTA..........

1.00

................................................................................................................TTGCTGCAGTTCAGGTGAGCTGGGGGCC..............................................................................................................

1.00

0.00

1.00

...........................................................................................................................................................................................................GCCCACTAAGGAGGAGGCGGC..........................

1.00

0.00

1.00

.....................................GGTCTGGGAGATGAGTTGAGGAGGACTGTGG......................................................................................................................................................................................

1.00

0.00

1.00

........................................................GGAGGACTGTGTGCAGGAGGGCTCCTG.......................................................................................................................................................................

1.00

.........................................................GAGGACTGTGTGCAGGAGGGC............................................................................................................................................................................

1.00

......................................................................................................................................................CAGTCTTGGCTCTGTTTCT.................................................................................

1.00

0.00

1.00

.............................................................................................................................................................GGCTCTGTTGCTTAGC.............................................................................

1.00

0.00

1.00

...................................................GTTGAGGAGGACTGTGTGCA...................................................................................................................................................................................

1.00

.................................................................TGTGCAGGAGGGCTCCTGTCTGTGTGAGTCTG.........................................................................................................................................................

1.00

0.00

1.00

...........................................................................GGCTCCTGTCTGTGTGGAT............................................................................................................................................................

1.00

0.00

1.00

...................................TTGGTCTGGGAGATGAGTTGAGGAGGAC...........................................................................................................................................................................................

1.00

...TTCCTTTAGGCTTCGGGGAG...................................................................................................................................................................................................................................

1.00

0.00

1.00

.............................................................................................................................................................................................................CCACTAAGGAGGAGGAGTCA.........................

1.00

.............................................................................................................................................................GGCTCTGTTGCTTAGTGGGC.........................................................................

1.00

0.00

1.00

......................................................GAGGAGGACTGTGTGCAGGAGGGCT...........................................................................................................................................................................

1.00

....................................................................................................................................TGGGGGCTCAGTATGTTTGGTT................................................................................................

1.00

0.00

1.00

...............................................................................................................................................................................................TGTTCCCAGCCTGCCCACTAAGGAGGAGGAGC...........................

1.00

0.00

1.00

.........................................................................................TGAGTTTGTGTAGTGTAGT..............................................................................................................................................

1.00

0.00

1.00

.......................................................................................................................AGTTCAGGTGAGCTGGGGGCTCAGTACGTT.....................................................................................................

1.00

0.00

1.00

..................................................................................................................................................................................................................AAGGAGGAGGAGTCATTGCTG...................

1.00

................................................................GTGTGCAGGAGGGCTCCT........................................................................................................................................................................

1.00

.............................................................................................................................................................GGCTCTGTTGCTTAGTTGGG.........................................................................

0.75

0.50

0.25

.............................................................................................................................................................GGCTCTGTTGCTTAGTTGGA.........................................................................

0.50

0.25

.............................................................................................................................................................GGCTCTGTTGCTTAGT.............................................................................

0.50

..................................................................................................................................................................................................................AAGGAGGAGGAGTCATTG......................

0.50

.............................................................................................................................................................GGCTCTGTTGCTTAGTTAGC.........................................................................

0.50

0.25

.............................................................................................................................................................GGCTCTGTTGCTTAGTCGGC.........................................................................

0.50

0.25

.............................................................................................................................................................GGCTCTGTTGCTTAGTTTG..........................................................................

0.25

0.50

0.25

.............................................................................................................................................................GGCTCTGTTGCTTAGTTGGT.........................................................................

0.25

0.50

0.25

.............................................................................................................................................................GGCTCTGTTGCTTAGTTTGA.........................................................................

0.25

0.50

0.25

.............................................................................................................................................................GGCTCTGTTGCTTAGTTCGC.........................................................................

0.25

0.50

0.25

.............................................................................................................................................................GGCTCTGTTGCTTAGTTGCC.........................................................................

0.25

0.50

0.25

.............................................................................................................................................................GGCTCTGTTGCTTAGTCGG..........................................................................

0.25

0.50

0.25

.......................................................AGGAGGACTGTGTGC....................................................................................................................................................................................

0.14