ID: uc001oru.1_intron_0_0_chr11_71809462_r
GENE: (1)
chr11:71809412-71809876-


(2)
AGO2.ip 		(13)
B-CELL 		(2)
BRAIN 		(10)
BREAST 		(41)
CELL-LINE 		(1)
CERVIX 		(4)
HEART 		(4)
HELA 		(7)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(23)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
TCACAGGGCATGGAGCAGCATGAGTACATGGACCGTGCCAGGCAGTACAGGTGAGCACCTGGCCAGCGTGGGTCCCTCAGGCTACTTGGGCTCCCACCCTCCATCACTGTTCCAGCTTTGGAGCCTGGCCCCTAGTCCAAGCTTCTCATTTGGTGCAGCCCTGGAGACTGACCACAGATCACTTGGGTGCTTCAGTAGTTATTCATGTCAGCCCTGTTTACCCTGTGACACTCTTGAGGGCGCTGAGGCCAAGGGAGATGGGCCTAGATTGAGTCTGTGATGAGCTGAGACCTTCCCTCCCAGATACCCCTCCTCGACACCCTGCTTCTCTGGCCTGAGGGGATGAGGCTTACCTGGGCTGGGCAGGGCAGACTGTGGCTTAACTGCCTACCCCCACCCCCTCTCTCTTGGTCAGCACCCGCTTGGCTGTGCTGAGCAGCAGCCTGACCCATTGGAAGAAGCTGC
........................................................................................................................................................................................((((.((.((((.((((((((.(((.((((.(((........))).(((((...(((......)))..)))))..))))...))))))....)))))..))))))))))............................................................................................................................................................................
..................................................................................................................................................................................179..................................................................................................................296.......................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR029129(GSM416758)
SW480. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM416733(GSM416733)
HEK293. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038863(GSM458546)
MM603. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029127(GSM416756)
A549. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR191609(GSM715719)
194genomic small RNA (size selected RNA from . (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR343334SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR191544(GSM715654)
126genomic small RNA (size selected RNA from . (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM359191(GSM359191)
HepG2_3pM_5. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
...............................................................................................................................................................................................................................................................................AGTCTGTGATGAGCTGAGACC.............................................................................................................................................................................211128.00128.0023.0011.006.008.0010.008.003.005.004.00-2.002.001.005.003.001.00-1.002.004.003.002.00--2.001.001.001.00-1.00------1.00--------1.00-1.00----1.00---1.001.00-------1.00---1.00--1.00--1.001.001.00-----1.00----------1.001.00--1.00---1.00-1.00--------
...............................................................................................................................................................................................................................................................................AGTCTGTGATGAGCTGAGAC..............................................................................................................................................................................20148.0048.0012.007.00---4.007.003.002.00--1.003.00-----1.00-------1.001.00-------------1.00--2.00---------1.00-----1.00----------1.00-----------------------------------------
...............................................................................................................................................................................................................................................................................AGTCTGTGATGAGCTGAGACCT............................................................................................................................................................................22139.0039.003.00-8.004.00------2.002.00--1.001.00-3.00----3.00-1.002.00---1.00-----------1.00-----1.00--------------------------1.00---1.00-------------1.00----1.00-1.00---1.00---------
................................................................................................................................................................................................................................................................................GTCTGTGATGAGCTGAGACC.............................................................................................................................................................................20116.0016.003.00-1.003.002.00-1.00---1.00----2.00-------------1.00---------1.00------1.00------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................AGTCTGTGATGAGCTGAG................................................................................................................................................................................1816.006.00----2.00---------------------------------2.00-1.00-------------------------------------------------------1.00----------------
...............................................................................................................................................................................................................................................................................AGTCTGTGATGAGCTGAGA...............................................................................................................................................................................1916.006.00--------1.00-----1.00---------------------1.00---1.00-------------------------1.00---------------------------------1.00------------
...........................ATGGACCGTGCCAGGCAGTACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................2313.003.00---------2.00----------------------1.00--------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................GTCTGTGATGAGCTGAGAC..............................................................................................................................................................................1913.003.00------------------1.00-------1.00--------------------------------------------------------------------------1.00-----------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCAGCAGCCTGACCCATTGGAAGATGC...313.000.00----------------3.00------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................GTCTGTGATGAGCTGAGACCT............................................................................................................................................................................2113.003.00---------------------1.00-----------------1.00------1.00------------------------------------------------------------------
........................TACATGGACCGTGCCAGGCAGTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002.00----------------------------------1.001.00-----------------------------------------------------------------------------
...CAGGGCATGGAGCAGCATGAGTACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002.00------------------------------2.00----------------------------------------------------------------------------------
....AGGGCATGGAGCAGCATGAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002.00-----------------------2.00-----------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGCAGCCTGACCCATTGGAA........2412.002.00------------------------------------------2.00----------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................GAGTCTGTGATGAGCTGAGACCT............................................................................................................................................................................2312.002.00---------------------------1.00------------------------------1.00------------------------------------------------------
........................TACATGGACCGTGCCAGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00---------------------------------------------1.00-------------------------------------------------------------------
.......................................................................................................................................................................................TGGGTGCTTCAGTAGCAGA.......................................................................................................................................................................................................................................................................191.000.00--1.00--------------------------------------------------------------------------------------------------------------
.........................ACATGGACCGTGCCAGGCAGTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00----------------------------------------------------------------------1.00------------------------------------------
...................ATGAGTACATGGACCGTGCCAGGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00------------------------------------------------1.00----------------------------------------------------------------
...........................ATGGACCGTGCCAGGCAGTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-----------------------1.00-----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................AGTCTGTGATGAGCTGAGAGCT............................................................................................................................................................................2211.006.00--1.00--------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGACCCATTGGAAGAAGCTGC2311.001.00-------------------------------------------------------------------------------------1.00---------------------------
..........................................................................................................................................................................................................................................TGAGGGCGCTGAGGCCAAGGGAGATGG............................................................................................................................................................................................................2711.001.00-----------------------------------------------------------1.00-----------------------------------------------------
.CACAGGGCATGGAGCAGCAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00---------------------------------------------------------------------------------1.00-------------------------------
...CAGGGCATGGAGCAGCAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---------1.00-------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGCTGTGCTGAGCAGC.........................1911.001.00-------------------------------1.00---------------------------------------------------------------------------------
....AGGGCATGGAGCAGCATGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-------------------------------------------------------------1.00---------------------------------------------------
..........TGGAGCAGCATGAGTACATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----------------------------1.00------------------------------------------------------------------------------------
.CACAGGGCATGGAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.001.00-------------------------------0.50------------------------------------------------0.50--------------------------------
...........................ATGGACCGTGCCAGGCAGTACAGCACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2711.003.00----------------------------------1.00------------------------------------------------------------------------------
......................AGTACATGGACCGTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................1611.001.00-------------------------------1.00---------------------------------------------------------------------------------
...CAGGGCATGGAGCAGCATGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------1.00-------------------------------------------------------------------------------------------------------
......................................................................................................................................GTCCAAGCTTCTCATCATA........................................................................................................................................................................................................................................................................................................................191.000.00---------1.00-------------------------------------------------------------------------------------------------------
.......................GTACATGGACCGTGCCAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------------------------------------------------------------------------------1.00-----------------------
................................................................................................................................................................................................CAGTAGTTATTCATGTTTTG.............................................................................................................................................................................................................................................................201.000.00-------------------------------------------------------------------------1.00---------------------------------------
........................TACATGGACCGTGCCAGGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------------------------------------------------------------------------1.00-------------------------
............................TGGACCGTGCCAGGCAGTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-------------------------------------1.00---------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TGATGAGCTGAGACCTTCCCCCCA....................................................................................................................................................................2411.001.00-------------------------------------------1.00---------------------------------------------------------------------
.........................ACATGGACCGTGCCAGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00------------1.00----------------------------------------------------------------------------------------------------
.....................GAGTACATGGACCGTGCCAGGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00------------------------------------------------------------------------------------------1.00----------------------
....................TGAGTACATGGACCGTGCCAGGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00----------------------------1.00------------------------------------------------------------------------------------
.....................GAGTACATGGACCGTAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00--------------------1.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGACCCATTGGAAGAAGCTGC2411.001.00-----------------------------------1.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................AGTCTGTGATGAGCTGGTAT..............................................................................................................................................................................201.000.001.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGAGCAGCAGCCTGACCCATTGGA.........2711.001.00-------------------------------------------------------------------------------1.00---------------------------------
..ACAGGGCATGGAGCAGCAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00---------1.00-------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCACCCGCTTGGCTGTGCTGAGCAGCAGCCTGAC.................3411.001.00---------------------------------------------------------------1.00-------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................CCACCCCCTCTCTCTAAG......................................................181.000.00---------------------------------------------------1.00-------------------------------------------------------------
.........................ACATGGACCGTGCCAGGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-------------------------------------------------1.00---------------------------------------------------------------
....................................................................................................................................................................................................................................................GAGGCCAAGGGAGATGGGCCTAGATTGAGTCTG............................................................................................................................................................................................3311.001.00-----------1.00-----------------------------------------------------------------------------------------------------
...........................ATGGACCGTGCCAGGCAGTACAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................2511.003.00-------------------------------------------------------------------1.00---------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................CCCCCTCTCTCTTGGGCTG..................................................191.000.00---------------------------------------------------------------------------------------------1.00-------------------
........................TACATGGACCGTGCCAGGCAGTACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................271.000.00--------------------------------------------------------------------------------------1.00--------------------------
.CACAGGGCATGGAGCAGCATGAGTACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00------------------------------------------------1.00----------------------------------------------------------------
...............................................................................................................................................................................................................................................................................AGTCTGTGATGAGCTGAGACCTAA..........................................................................................................................................................................2411.0039.00----------1.00------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCAGCAGCCTGACCCATTGGAAGAAGC...3011.001.00--------------------------------1.00--------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................AGTCTGTGATGAGCTGA.................................................................................................................................................................................1711.001.00---------------------------------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................ACCCCCACCCCCTCTCGT..........................................................181.000.00--------------------------------------------------1.00--------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAAGAAGCTGCCATA191.000.00----------------------------1.00------------------------------------------------------------------------------------
...CAGGGCATGGAGCAGCATGAGTAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00------------------------------1.00----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................TGATGAGCTGAGACCTTCCC........................................................................................................................................................................2011.001.00------------------------------------------------------------------------------------1.00----------------------------
...................ATGAGTACATGGACCGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------1.00------------------------------------------------------------------------------------------------
.........................ACATGGACCGTGCCAGGCAGTACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................261.000.00----------------------------------------------------------------------------------1.00------------------------------
...CAGGGCATGGAGCAGCATGAGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-------------------------------------------------------------------------------------------1.00---------------------
.................................................................................................................................................................................................................................................................................................................................................................................AGACTGTGGCTTAACTG...............................................................................1720.500.50----------------------------------0.50------------------------------------------------------------------------------
...................ATGAGTACATGGACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................1520.500.50--------------------------------0.50--------------------------------------------------------------------------------
.......................GTACATGGACCGTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................1520.500.50----------------------------------------------------------------------------------------------------------0.50------
.CACAGGGCATGGAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.500.50--------------------------------------------------------------------------------0.50--------------------------------
.....................................................................................................................................................................................................................................................................................................................CTCCTCGACACCCTG.............................................................................................................................................1520.500.50---------------------------------------------------------------------------------------------------------0.50-------
.......................................................................................................................................................................................................................................................................................................................................................................TGGGCAGGGCAGACTGTGG.......................................................................................1920.500.50---------------------------------0.50-------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGCTGTGCTGAGCAG..........................1830.330.33------------------------------------------------------------------------------------------------------------0.33----
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCTGTGCTGAGCAG..........................1730.330.33-------------------------------------------------------------------------------------------------------------0.33---
...CAGGGCATGGAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1730.330.33-------------------------------------------------0.33---------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGGCTGTGCTGAGC............................1730.330.33-----------------------------------------------------------------------------------------------------------0.33-----
............................TGGACCGTGCCAGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................1530.330.33-----------------------------------0.33-----------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGAGCAGCAGCCTGA..................1830.330.33---------------0.33-------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................CAGACTGTGGCTTAAC.................................................................................1640.250.25--------------------------------------------------------------------------------------------------------------0.25--
................................................................................................................................................................................................................................................................................................................................................................................CAGACTGTGGCTTAACACA..............................................................................1940.250.25---------0.25-------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................GGCAGGGCAGACTGTGG.......................................................................................1750.200.20---------------------------------------------------------------------------------------------------------------0.20-
...............................................................................................................................................................................................................................................................................................................................................................ACCTGGGCTGGGCAGGG.................................................................................................1770.140.14----------------------------------------------------------------------------------------------------------------0.14

Antisense strand
TCACAGGGCATGGAGCAGCATGAGTACATGGACCGTGCCAGGCAGTACAGGTGAGCACCTGGCCAGCGTGGGTCCCTCAGGCTACTTGGGCTCCCACCCTCCATCACTGTTCCAGCTTTGGAGCCTGGCCCCTAGTCCAAGCTTCTCATTTGGTGCAGCCCTGGAGACTGACCACAGATCACTTGGGTGCTTCAGTAGTTATTCATGTCAGCCCTGTTTACCCTGTGACACTCTTGAGGGCGCTGAGGCCAAGGGAGATGGGCCTAGATTGAGTCTGTGATGAGCTGAGACCTTCCCTCCCAGATACCCCTCCTCGACACCCTGCTTCTCTGGCCTGAGGGGATGAGGCTTACCTGGGCTGGGCAGGGCAGACTGTGGCTTAACTGCCTACCCCCACCCCCTCTCTCTTGGTCAGCACCCGCTTGGCTGTGCTGAGCAGCAGCCTGACCCATTGGAAGAAGCTGC
........................................................................................................................................................................................((((.((.((((.((((((((.(((.((((.(((........))).(((((...(((......)))..)))))..))))...))))))....)))))..))))))))))............................................................................................................................................................................
..................................................................................................................................................................................179..................................................................................................................296.......................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR029129(GSM416758)
SW480. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM416733(GSM416733)
HEK293. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR038863(GSM458546)
MM603. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR191610(GSM715720)
195genomic small RNA (size selected RNA from . (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029127(GSM416756)
A549. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR191609(GSM715719)
194genomic small RNA (size selected RNA from . (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR343334SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR191544(GSM715654)
126genomic small RNA (size selected RNA from . (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191608(GSM715718)
193genomic small RNA (size selected RNA from . (breast)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM359191(GSM359191)
HepG2_3pM_5. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR038862(GSM458545)
MM472. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
.................................................................................................................................................................................................................................................................................TCTGTGATGAGCTGAAC............................................................................................................................................................................... 172.000.00-------------------------------------------------------1.00------------1.00--------------------------------------------
....................................................................................................................................................................................................AGTTATTCATGTCAGCCCTGTCTGA.................................................................................................................................................................................................................................................... 251.000.00----------------------------------------------------------------------------------------1.00------------------------
..........................................................................................................................TGGACTAGGGGCCAGGC...................................................................................................................................................................................................................................................................................................................................... 1711.001.00---------------------------------1.00-------------------------------------------------------------------------------
.............................................................................................................................................................TCTGTGGTCAGTCTCCAGGGC............................................................................................................................................................................................................................................................................................... 2111.001.00----------------------------------------------------------------1.00------------------------------------------------
..........................................................CTGGCCAGCGTGGGTCAG..................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00-------------------------------------------1.00---------------------------------------------------------------------
...................................TGCCAGGCAGTACAGATG............................................................................................................................................................................................................................................................................................................................................................................................................................ 181.000.00-----------------------------------------------------1.00-----------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGGCTGCTGCTCAGC................. 1840.250.25---------------------0.25-------------------------------------------------------------------------------------------