ID: uc001olj.1_intron_3_0_chr11_67207735_r
GENE: (6)
chr11:67207685-67207855-


(1)
AGO2.ip
(5)
B-CELL
(1)
BRAIN
(10)
BREAST
(31)
CELL-LINE
(5)
CERVIX
(3)
FIBROBLAST
(4)
HEART
(3)
HELA
(1)
KIDNEY
(4)
LIVER
(2)
OTHER
(36)
SKIN
(2)
UTERUS
(1)
XRN.ip

Sense strand
TGCTGCCCTTCTACGACCCCGACACCAGTGTGGTCTACGTCTGCGGCAAGGTGGGGCTGGGCAGGGCTGGCGAGGGGCAGGGAAGAGGCGTGCCCAGGTGCTGAGCCCCCTCCCCACACAGGGTGACTCCAGCATCCGGTACTTTGAGATCACAGAGGAGCCTCCCTACAT
.........................................................((((..(((((((((..(((((...........)))))...)))).)))))....)))).......................................................
.........................................................58.............................................................121................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR038854(GSM458537)
MM653. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR038862(GSM458545)
MM472. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR040018(GSM532903)
G701N. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191529(GSM715639)
131genomic small RNA (size selected RNA from . (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
GSM956925PAZD5SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577740(Rovira)
total RNA. (breast)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040039(GSM532924)
G531T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
GSM532888(GSM532888)
G761T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR553575(SRX182781)
source: Kidney. (Kidney)
..............................................................AGGGCTGGCGAGGGGCAGGGAAGAG....................................................................................25121.0021.004.00-1.00-2.00-----1.00--2.00-1.00------1.00--------1.002.00------1.00--1.00-------------1.00---1.00-----------------1.00------------------1.00----------
.................................TCTACGTCTGCGGCAAG.........................................................................................................................17117.0017.00-------5.00-1.00---1.00--3.00---3.00-------------------------1.00---1.00------------------1.00---1.00----------------------------------
..............................................................AGGGCTGGCGAGGGGCAGGGAAG......................................................................................2318.008.002.00---1.001.00----------------------1.00--1.00-1.00---------------1.00----------------------------------------------------------
...............................................................................GGGAAGAGGCGTGCCCA...........................................................................1725.505.50-----------------------0.50---------------0.50------------------------------1.00--------1.00------------------0.500.500.50--0.500.50---
..........................AGTGTGGTCTACGTCTGCGGCA...........................................................................................................................2214.004.00-----------2.002.00-----------------------------------------------------------------------------------------------
................................GTCTACGTCTGCGGCAAG.........................................................................................................................1814.004.001.00--------2.00-------------------------------------------1.00------------------------------------------------------
...................................................................TGGCGAGGGGCAGGGAAG......................................................................................1814.004.00--1.00-----1.00------------------1.00--------------------1.00-----------------------------------------------------------
..................................................GTGGGGCTGGGCAGGGCTGGCGAGGGGCAGGGAAGAGGCGTGCCCAGGTGCTGAGCCCCCTCTTA........................................................654.000.00---4.00--------------------------------------------------------------------------------------------------------
...............................................................GGGCTGGCGAGGGGCAGGGAAGAG....................................................................................2414.004.00---------------------------1.00----------------------------------1.00---------------------1.00---------1.00-------------
..............................................................AGGGCTGGCGAGGGGCAG...........................................................................................1814.004.00------1.00------------------------------2.00--------------------1.00-------------------------------------------------
......................CACCAGTGTGGTCTACGTCTGCGGCAAG.........................................................................................................................2813.003.00--2.00--------------------------------------------------------------------------1.00------------------------------
..............................................................AGGGCTGGCGAGGGGCAGGGAAGA.....................................................................................2413.003.00--1.00-----1.00------------------------------------------------------------------------1.00--------------------------
.............................................................CAGGGCTGGCGAGGGGCAGGGAA.......................................................................................2313.003.00----------------------1.00---2.00---------------------------------------------------------------------------------
..................................................GTGGGGCTGGGCAGGGCTG......................................................................................................1913.003.001.00----------------------2.00------------------------------------------------------------------------------------
..............................................................................AGGGAAGAGGCGTGCCCAG..........................................................................1913.003.00-----1.00-----------------------2.00------------------------------------------------------------------------------
..................................................GTGGGGCTGGGCAGGGCTGGATC..................................................................................................2313.001.00------------------3.00-----------------------------------------------------------------------------------------
..............................................................AGGGCTGGCGAGGGGCA............................................................................................1713.003.00--1.00-1.001.00------------------------------------------------------------------------------------------------------
..............................................................AGGGCTGGCGAGGGGCAGGGAA.......................................................................................2213.003.00------------------------------2.00--------------------------------------------1.00--------------------------------
..................................................GTGGGGCTGGGCAGGGCTGGCGAGGGGCAGGGAAGAGGCGTGCCCAGGTGCTGAGCCCCCTCTTTT.......................................................663.000.00---3.00--------------------------------------------------------------------------------------------------------
...................................................TGGGGCTGGGCAGGG.........................................................................................................1503.003.00--------1.001.00------------------------1.00-------------------------------------------------------------------------
..........................................................GGGCAGGGCTGGCGAGGGGCAG...........................................................................................2212.002.00---------------2.00--------------------------------------------------------------------------------------------
..............................................................AGGGCTGGCGAGGGGCAGGGAAGAGGCGTG...............................................................................3012.002.00-----------------2.00------------------------------------------------------------------------------------------
...............................................................GGGCTGGCGAGGGGCAGGGAAG......................................................................................2212.002.00----------------------------------1.00-1.00-----------------------------------------------------------------------
.............................................................CAGGGCTGGCGAGGGGC.............................................................................................1712.002.00-----------------------------------1.00-------------------------------------------------------1.00----------------
..............................................................AGGGCTGGCGAGGGGCAGGGAAGAGGCGTGCCCAG..........................................................................3512.002.00------2.00-----------------------------------------------------------------------------------------------------
.............................................................CAGGGCTGGCGAGGGGCA............................................................................................1812.002.001.00-------------------------------------------------------------------------------1.00---------------------------
..................................CTACGTCTGCGGCAAG.........................................................................................................................1612.002.00--1.00----------------------------------------------------------1.00----------------------------------------------
..............................................................AGGGCTGGCGAGGGGC.............................................................................................1612.002.00--------1.00----------------------------------------------1.00----------------------------------------------------
.............................................................CAGGGCTGGCGAGGGGCAGGGA........................................................................................2212.002.001.00-----------------------------------------------------------------------1.00-----------------------------------
.....................ACACCAGTGTGGTCTACGTCTGCGGCAAGG........................................................................................................................3012.002.00--------------2.00---------------------------------------------------------------------------------------------
....................GACACCAGTGTGGTCTACGTCTGCGGCAAGG........................................................................................................................3111.001.00--------------1.00---------------------------------------------------------------------------------------------
.................................................................................................................................CAGCATCCGGTACTTTGAGAT.....................2111.001.00-------------------------------------------------------------------------------------1.00----------------------
....................................................................GGCGAGGGGCAGGGAAG......................................................................................1721.001.00------------------------1.00-----------------------------------------------------------------------------------
.................................TCTACGTCTGCGGCACG.........................................................................................................................171.000.00--------1.00---------------------------------------------------------------------------------------------------
.......................................................................................................................................CCGGTACTTTGAGATCACAGAGGA............2411.001.00----1.00-------------------------------------------------------------------------------------------------------
.........................................................TGGGCAGGGCTGGCGAGGGGCAG...........................................................................................2311.001.00------------------------------------------------------------------------------------------------1.00-----------
................................................................GGCTGGCGAGGGGCAGGGAAGAGGCGTGCCCAGG.........................................................................3411.001.00---------------------------------------------1.00--------------------------------------------------------------
.....................ACACCAGTGTGGTCTACGTCTGCGGCAACGG.......................................................................................................................311.000.00-------------------------1.00----------------------------------------------------------------------------------
.....................................................................GCGAGGGGCAGGGAAGAGGCGTG...............................................................................2311.001.00---------------------------------------------------------------------------------------1.00--------------------
...................................................TGGGGCTGGGCAGGGCTGGC....................................................................................................2011.001.00----1.00-------------------------------------------------------------------------------------------------------
...............................................................................GGGAAGAGGCGTGCCCAG..........................................................................1811.001.00-----------------------------------------------------------------------1.00------------------------------------
........................................................CTGGGCAGGGCTGGCGAGGGAAA............................................................................................231.000.00-------------1.00----------------------------------------------------------------------------------------------
...............................................................GGGCTGGCGAGGGGCAGGGAAGAGGCGTGCCCA...........................................................................3311.001.00---------------------------------------------------1.00--------------------------------------------------------
.............................................................CAGGGCTGGCGAGGGGCAGGG.........................................................................................2111.001.00-----------------------------------------------------------1.00------------------------------------------------
............................................................GCAGGGCTGGCGAGGGGCAGGGAAGAGGCG.................................................................................3011.001.00------------------------------------1.00-----------------------------------------------------------------------
..................................................GTGGGGCTGGGCAGGGCTGGCGAGGGGC.............................................................................................2811.001.00---------------------1.00--------------------------------------------------------------------------------------
......................CACCAGTGTGGTCTACGTCTGCGGCA...........................................................................................................................2611.001.00-------------------------1.00----------------------------------------------------------------------------------
...................................................TGGGGCTGGGCAGGGCTGGCG...................................................................................................2111.001.00----------------------------------------------------1.00-------------------------------------------------------
..............................................................AGGGCTGGCGAGGGGCAGGGAAGAGGC..................................................................................2711.001.00--------------------------------------------------------------------------------------1.00---------------------
...................................................................................AGAGGCGTGCCCAGGTGCTGAGCC................................................................2411.001.00------------------------------------------------------------------------------------------1.00-----------------
..................................................................CTGGCGAGGGGCAGGGAAG......................................................................................1911.001.00---------------------------------------------------------1.00--------------------------------------------------
......................................................................CGAGGGGCAGGGAAGAG....................................................................................1711.001.00------------------------------------------------------------------1.00-----------------------------------------
................................................................................................................................CCAGCATCCGGTACTTTGAG.......................2011.001.00-----------------------------------1.00------------------------------------------------------------------------
.....................................................................GCGAGGGGCAGGGAAGAGGCGTGCC.............................................................................2511.001.00--------------------------------------------------------------------------1.00---------------------------------
......................................................................CGAGGGGCAGGGAAGAGGC..................................................................................1911.001.00---------------------1.00--------------------------------------------------------------------------------------
...............................................................GGGCTGGCGAGGGGCAGGGACG......................................................................................221.000.00---------1.00--------------------------------------------------------------------------------------------------
.......................................................GCTGGGCAGGGCTGGCAGAG................................................................................................201.000.00--------------------------------------1.00---------------------------------------------------------------------
..................................................GTGGGGCTGGGCAGGGCTGGCGA..................................................................................................2311.001.00----------------------------1.00-------------------------------------------------------------------------------
..............................................................AGGGCTGGCGAGGGGCAGGGCGG......................................................................................2311.001.00------------------------------------------------------1.00-----------------------------------------------------
...................................................TGGGGCTGGGCAGGGCTGGCGAGGGGCA............................................................................................2811.001.00----------------------------------------------------------------------------------1.00-------------------------
.............................................................................CAGGGAAGAGGCGTGCCCAGGT........................................................................2211.001.00--------------------------------------------------------------------------------------------1.00---------------
..............................................................AGGGCTGGCGAGGGGCAGGAAA.......................................................................................221.000.001.00-----------------------------------------------------------------------------------------------------------
.......................................................................................................................................CCGGTACTTTGAGATCACAGAGGAA...........2511.001.00-------------------------------------------1.00----------------------------------------------------------------
..............................................................AGGGCTGGCGAGGGGCAGGG.........................................................................................2011.001.00-----1.00------------------------------------------------------------------------------------------------------
..................................................................................................TGCTGAGCCCCCTCCCCACA.....................................................2011.001.00-----------------------------------------------------------------------------------------------1.00------------
.......................................................................GAGGGGCAGGGAAGAGGCGTGC..............................................................................2211.001.00-------------------------------------------------------------------1.00----------------------------------------
...............................................................GGGCTGGCGAGGGGCAGGGAAGAGGCGT................................................................................2811.001.00------------------------1.00-----------------------------------------------------------------------------------
...............................................................GGGCTGGCGAGGGGCAGGGAA.......................................................................................2111.001.00-----------------------------------------------------------------1.00------------------------------------------
...................................................................TGGCGAGGGGCAGGGAAGAGGCGTGCC.............................................................................2711.001.00----------------------1.00-------------------------------------------------------------------------------------
..............................................................AGGGCTGGCGAGGGGCAGGGACGAG....................................................................................251.000.00----------1.00-------------------------------------------------------------------------------------------------
............................................................................................................................................ACTTTGAGATCACAGACAAC...........201.000.00-----------------------------------------1.00------------------------------------------------------------------
.........................................................TGGGCAGGGCTGGCGAGGGGAA............................................................................................221.000.00------1.00-----------------------------------------------------------------------------------------------------
...................................................................................................................................GCATCCGGTACTTTGAGATCACA.................2311.001.00------------1.00-----------------------------------------------------------------------------------------------
......................................................GGCTGGGCAGGGCTGGCGAGGGGCA............................................................................................2511.001.00---------------------1.00--------------------------------------------------------------------------------------
.......................ACCAGTGTGGTCTACGTCTGCGGCAAGGGTG.....................................................................................................................311.000.00----------1.00-------------------------------------------------------------------------------------------------
.........................................................................................................................................GGTACTTTGAGATCACAGAGGAGC..........2411.001.00-----------1.00------------------------------------------------------------------------------------------------
.............................................................................CAGGGAAGAGGCGTGCCCAGG.........................................................................2111.001.00---------------------------------------------------------------1.00--------------------------------------------
...................................................TGGGGCTGGGCAGGGCTGGCGA..................................................................................................2211.001.00-----1.00------------------------------------------------------------------------------------------------------
..................................................GTGGGGCTGGGCAGGGCTGG.....................................................................................................2011.001.001.00-----------------------------------------------------------------------------------------------------------
........TTCTACGACCCCGACATA.................................................................................................................................................181.000.00--------------------------------------------------------------------1.00---------------------------------------
.....................................................GGGCTGGGCAGGGCTGGCG...................................................................................................1911.001.00--------------------------------------1.00---------------------------------------------------------------------
..............................................................................AGGGAAGAGGCGTGCCCAGGTGCTGAGCCC...............................................................3011.001.00----------------------------------------------------------------1.00-------------------------------------------
..........................AGTGTGGTCTACGTCTGCGGCAAG.........................................................................................................................2411.001.00------------1.00-----------------------------------------------------------------------------------------------
..............................................................AGGGCTGGCGAGGGGCAGGGAAGAGGCGTGCCCCG..........................................................................351.000.00------1.00-----------------------------------------------------------------------------------------------------
.....................ACACCAGTGTGGTCTACGTCTGCG..............................................................................................................................2411.001.00---------------------------------1.00--------------------------------------------------------------------------
..............................................................................................................................CTCCAGCATCCGGTACTTTGAGAT.....................2411.001.00-------------------1.00----------------------------------------------------------------------------------------
.....................................................GGGCTGGGCAGGGCTGGCGAGGGG..............................................................................................2411.001.00----------------------------------------------------------------------------------------1.00-------------------
..................................................GTGGGGCTGGGCAGGGCTGGC....................................................................................................2111.001.00-----------------------------------------------------------------------------------------1.00------------------
...........................................................................................................................TGACTCCAGCATCCGAGA..............................181.000.00-----------------1.00------------------------------------------------------------------------------------------
............ACGACCCCGACACCAG...............................................................................................................................................1611.001.001.00-----------------------------------------------------------------------------------------------------------
.......................................................................GAGGGGCAGGGAAGATGGA.................................................................................191.000.00----------------------------------------1.00-------------------------------------------------------------------
...................................................TGGGGCTGGGCAGGGCTGGGGGG.................................................................................................231.000.00-----------1.00------------------------------------------------------------------------------------------------
.....................................................................GCGAGGGGCAGGGAAG......................................................................................1630.670.67-----0.33---------------------------------------------------------------------------------------------------0.33--
................................................................................GGAAGAGGCGTGCCCA...........................................................................1620.500.50-----------------------------------------------------------------------------------------------------0.50------
......................................................................................................................................TCCGGTACTTTGAGA......................1520.500.500.50-----------------------------------------------------------------------------------------------------------
..................................................GTGGGGCTGGGCAGGGC........................................................................................................1760.500.50----0.17--------------------0.17--------------------------------------------------------------------------------0.17-
......................................................................................................................................TCCGGTACTTTGAGATCA...................1820.500.50------------------------------------------------------------------------------------------------------0.50-----
.............................................................CAGGGCTGGCGAGGGG..............................................................................................1640.250.25--0.25---------------------------------------------------------------------------------------------------------
.................................................................................GAAGAGGCGTGCCCA...........................................................................1540.250.25------------------------0.25-----------------------------------------------------------------------------------
..............................................................AGGGCTGGCGAGGGG..............................................................................................1590.220.220.11----------------------------------------------------------------------------------------------------------0.11
......................................................................CGAGGGGCAGGGAAG......................................................................................1590.110.11----0.11-------------------------------------------------------------------------------------------------------
..............................................................AGGGCTGGCGAGGGGAAG...........................................................................................1890.110.22----------------------------------------0.11-------------------------------------------------------------------

Antisense strand
TGCTGCCCTTCTACGACCCCGACACCAGTGTGGTCTACGTCTGCGGCAAGGTGGGGCTGGGCAGGGCTGGCGAGGGGCAGGGAAGAGGCGTGCCCAGGTGCTGAGCCCCCTCCCCACACAGGGTGACTCCAGCATCCGGTACTTTGAGATCACAGAGGAGCCTCCCTACAT
.........................................................((((..(((((((((..(((((...........)))))...)))).)))))....)))).......................................................
.........................................................58.............................................................121................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR038854(GSM458537)
MM653. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR038862(GSM458545)
MM472. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR040018(GSM532903)
G701N. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191529(GSM715639)
131genomic small RNA (size selected RNA from . (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
GSM956925PAZD5SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577740(Rovira)
total RNA. (breast)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040039(GSM532924)
G531T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
GSM532888(GSM532888)
G761T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR553575(SRX182781)
source: Kidney. (Kidney)
..GGGGTCGTAGAAGGGCAG....................................................................................................................................................... 1819.009.00-9.00----------------------------------------------------------------------------------------------------------
...CACTGGTGTCGGGGTCGTAGAAGGGCA............................................................................................................................................. 2712.002.00-------------------2.00----------------------------------------------------------------------------------------
...............................................................................GGGAAGAGGCGTGCCCT........................................................................... 171.000.00---------------------------------------------------------------------------------------------1.00--------------
.......................CGCAGACGTAGACCACACTGGT.............................................................................................................................. 2211.001.00----------1.00-------------------------------------------------------------------------------------------------
......................................................................................................GAGCCCCCTCCCCACGAG................................................... 181.000.00----------------------------------------------------------------------------1.00-------------------------------
..................................................GCCAGCCCTGCCCAGCCCCAC.................................................................................................... 2111.001.00--------------------------------------------1.00---------------------------------------------------------------
...................................................................................................GCTGAGCCCCCTCCCCGG...................................................... 181.000.00-----------------------------------------------------------------------------------1.00------------------------
..............................................................................................................................CTCCAGCATCCGGTAGCTT.......................... 191.000.00-----------------------------------------------1.00------------------------------------------------------------
......................................................................................................................CCGGATGCTGGAGTCACCCTG................................ 2111.001.00----------1.00-------------------------------------------------------------------------------------------------