ID: uc001olh.2_intron_8_0_chr11_67200692_f.3p
GENE: (9)
chr11:67201266-67201515+


(2)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(1)
AGO2.ip 		(1)
AGO3.ip 		(6)
B-CELL 		(2)
BRAIN 		(2)
BREAST 		(15)
CELL-LINE 		(1)
CERVIX 		(2)
HEART 		(4)
HELA 		(3)
LIVER 		(3)
OTHER 		(25)
SKIN 		(1)
XRN.ip

Sense strand
CAGGAGCCTCTGCAAAGCCTTTGTGGAGAAGGTGGCTCCATTGACCAAACCTTGAAAGCCCTGAGGGTATCCATAGGTGGGAGCCACACCCAAAAGCATTCTCTCCCATGTCACCTGACCCCTACTCCAGCTAGCCCTGGGACCCGGGGACACATGAGCAGTACTTGCCCAGGCCCTCACCCTCTCTCCTGGTCCCGCAGTTTCTGAAACGGAATCCCAGCCAGCGGATTGGGGGTGGCCCAGGGGATGC
.....................................................................................................................................((...((((((.(((((.....(((..((....((....))....)).)))))))).))))))))....................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR040022(GSM532907)
G575N. (cervix)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR038862(GSM458545)
MM472. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
.........................................................................................................................................TGGGACCCGGGGACACATGAG............................................................................................21117.0017.00---1.00--1.00---2.002.00------1.001.00--1.00-----1.001.00---------1.00-1.00------1.00---1.001.00---1.00--------
.........................................................................................................................................TGGGACCCGGGGACACATGAGT...........................................................................................2219.0017.005.00------1.00----1.00--1.00----------------------------1.00---------------------
...............................................................................................................................................................................................................AACGGAATCCCAGCCAGCGG.......................2014.004.00-4.00----------------------------------------------------------------
..........................................................................................................................................................................................................TCTGAAACGGAATCCCAGCCAGCGG.......................2513.003.00--1.00---------------------------1.00---------------1.00-------------------
.......................................................................................................................................CCTGGGACCCGGGGACACATGAG............................................................................................2313.003.00-----3.00------------------------------------------------------------
..............................................................................................................................................................................................................AAACGGAATCCCAGCTG...........................173.000.00----------------2.00--------1.00----------------------------------------
........................................................................................................................................CTGGGACCCGGGGACACATGAG............................................................................................2213.003.00---1.00--1.00--------1.00--------------------------------------------------
.........................................................................................................................................TGGGACCCGGGGACACATGAGA...........................................................................................2213.0017.00------------1.00-----------1.00-----------------------------------1.00-----
.......................................................................................................................................CCTGGGACCCGGGGACACATG..............................................................................................2113.003.00--------------1.00-----1.00---------------1.00-----------------------------
.......................................................................................................................................CCTGGGACCCGGGGACACATGA.............................................................................................2213.003.00----2.00-----------------------------1.00-------------------------------
.......................................................................................................................................CCTGGGACCCGGGGACACATGAGT...........................................................................................2412.003.00--------------1.00------------1.00--------------------------------------
........................................................................................................................................................................................................TTTCTGAAACGGAATCCC................................1812.002.00--2.00---------------------------------------------------------------
......................................................................................................................................CCCTGGGACCCGGGGACACAT...............................................................................................2112.002.00---------2.00--------------------------------------------------------
.......................................................................................................................................CCTGGGACCCGGGGACACATGAA............................................................................................2312.003.00---1.00----------------------1.00---------------------------------------
......................................................................................................................................CCCTGGGACCCGGGGACACATGA.............................................................................................2312.002.00---------------------------------------------------1.00----------1.00---
........................................................................................................................................CTGGGACCCGGGGACACATGAGT...........................................................................................2312.003.00-----------------------------------------------1.00--1.00---------------
.........................................................................................................................................TGGGACCCGGGGACACATGA.............................................................................................2012.002.00-------------1.00---------------------1.00------------------------------
.......................................................................................................................................CCTGGGACCCGGGGACACCTGA.............................................................................................221.000.00-------------------------------------------------1.00----------------
................................................................................................................................................................................................................................CGGATTGGGGGTGGCCC.........1711.001.00--------------------------------1.00---------------------------------
.......................................................................................................................................CCTGGGACCCGGGGACACATGC.............................................................................................2211.003.00----1.00-------------------------------------------------------------
.......................................................................................................................................................................CCCAGGCCCTCACCCTCTGA...............................................................201.000.00---------------------------------1.00--------------------------------
.....................................CCATTGACCAAACCTTGAAAGCC..............................................................................................................................................................................................2311.001.00-------------------------------------------1.00----------------------
.................................................................................................................................................................................CACCCTCTCTCCTGGTCCCGCA...................................................2211.001.00--------1.00---------------------------------------------------------
........................................................................................................................................CTGGGACCCGGGGACACATG..............................................................................................2011.001.00-------------------------------------------------------1.00----------
.........................................................................................................................................TGGGACCCGGGGACACATGAGAT..........................................................................................2311.0017.00-------1.00----------------------------------------------------------
........................................................................................................................................................................................................TTTCTGAAACGGAATCCCAGCCAGCGGA......................2811.001.00-----------------1.00------------------------------------------------
.........................................................................................................................................TGGGACCCGGGGACACATGAGC...........................................................................................2211.001.00------1.00-----------------------------------------------------------
........................................................................................................................................................................................................TTTCTGAAACGGAATCCCAG..............................2011.001.00--1.00---------------------------------------------------------------
.......................................................................................................................................................................................................GTTTCTGAAACGGAATC..................................1711.001.00----------------------------------------------------------1.00-------
.........................................................................................................................................TGGGACCCGGGGACACATGAAGA..........................................................................................2311.002.00-------------1.00----------------------------------------------------
..............................................................................................................................................................................................................................AGCGGATTGGGGGTGGCCCAGGGGAT..2611.001.00---------------------------------------------1.00--------------------
........................................................................................................................................................................................................................CCAGCCAGCGGATTGGGTA...............191.000.00-------------------------------------------------------------1.00----
..............................................................................................................................................................................................................AAACGGAATCCCAGCCAGCGG.......................2111.001.00-----------------1.00------------------------------------------------
..........................................................................................................................................................................................................................AGCCAGCGGATTGGGGGTGGCCCAGGGG....2811.001.00------------------------------------------1.00-----------------------
.......................................................................................................................................CCTGGGACCCGGGGACACAT...............................................................................................2011.001.00-------------------------------1.00----------------------------------
................................................................................................................................................................................................................................CGGATTGGGGGTGGCCCAGGGTATG.251.000.00--------1.00---------------------------------------------------------
..................................................................................................................................................................................ACCCTCTCTCCTGGTCCCGCAG..................................................2211.001.00-----------------------1.00------------------------------------------
.........................................................................................................................................TGGGACCCGGGGACACATGGG............................................................................................211.000.00------------------1.00-----------------------------------------------
......................................................................................................................................CCCTGGGACCCGGGGACACATG..............................................................................................2211.001.00--------------------------------------1.00---------------------------
........................................................................................................................................CTGGGACCCGGGGACACATGAGA...........................................................................................2311.003.00----------------------------------------1.00-------------------------
...............................................................................................................................................................................................GTCCCGCAGTTTCTG............................................1520.500.50---------------------------------------------------------------0.50--
................................................................................................................................................................................................................................CGGATTGGGGGTGGC...........1520.500.50-------------------0.50----------------------------------------------
................................................................................................................................................CGGGGACACATGAGC...........................................................................................1530.330.33----------------------------------------------------------------0.33-
.........................................................................................................................................................................................CTCCTGGTCCCGCAG..................................................1560.170.17--------------------0.17---------------------------------------------

Antisense strand
CAGGAGCCTCTGCAAAGCCTTTGTGGAGAAGGTGGCTCCATTGACCAAACCTTGAAAGCCCTGAGGGTATCCATAGGTGGGAGCCACACCCAAAAGCATTCTCTCCCATGTCACCTGACCCCTACTCCAGCTAGCCCTGGGACCCGGGGACACATGAGCAGTACTTGCCCAGGCCCTCACCCTCTCTCCTGGTCCCGCAGTTTCTGAAACGGAATCCCAGCCAGCGGATTGGGGGTGGCCCAGGGGATGC
.....................................................................................................................................((...((((((.(((((.....(((..((....((....))....)).)))))))).))))))))....................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR040022(GSM532907)
G575N. (cervix)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR038862(GSM458545)
MM472. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
.............................................................................................................................................................................................................................ACCCCCAATCCGCTG.............. 1511.001.00--------------------------------------------------------1.00---------
..................................................................................................AGGTGACATGGGAGAGAA...................................................................................................................................... 1811.001.00-----------------------------------------------------------1.00------
......................................................................................................................................................................................AGAAACTGCGGGACCAGGAGAGA............................................. 2311.001.00---------------------1.00--------------------------------------------
...............................................................................................GTGACATGGGAGAGAATGC........................................................................................................................................ 1911.001.00-------------------------------------1.00----------------------------
................................................................................GAGAATGCTTTTGGGTGTGGCTC................................................................................................................................................... 2311.001.00------------------------------------------------------1.00-----------
..........................ATGGAGCCACCTTCT................................................................................................................................................................................................................. 1560.170.17-----------------------------------------------------------------0.17