| (2) B-CELL | (15) BREAST | (12) CELL-LINE | (6) CERVIX | (2) HEART | (3) HELA | (1) KIDNEY | (3) LIVER | (2) OTHER | (17) SKIN | (1) XRN.ip |
| GAGTGGGGTCAGTCTTTAGCCTGTTTCTTTGGCCACGTTTCCCCACTGTTTGCTCTCCTGTGTCCCTTGTTTGAGTCTTTAAAGGGTGCTGTAGGGCCCTGACTGCTGGGCCGGATGGTCCTTTTTTTGGAACTCCTTGATTGTAGATATTATTTTCCCAGAAGGCGCTGGGCTAACCCTGCTCTCTTCCCTTCGTGCAGACAAACTCAACCAGAACTCCCAGCTGAGCCACAGTTATCAGGAGAGGAGT ...........................................................................(((..((((((..((((..(((((........)))))..))))..))))))..)))....................................................................................................................... ...........................................................................76................................................................................158.......................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR207110(GSM721072) Nuclear RNA. (cell line) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR189787 | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR444061(SRX128909) Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR037936(GSM510474) 293cand1. (cell line) | SRR037935(GSM510473) 293cand3. (cell line) | SRR444058(SRX128906) Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin) | SRR444052(SRX128900) Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin) | SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin) | DRR001486(DRX001040) "Hela long cytoplasmic cell fraction, LNA(+)". (hela) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR033712(GSM497057) Burkitt Lymphoma (BL510). (B cell) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR191629(GSM715739) 5genomic small RNA (size selected RNA from to. (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR444060(SRX128908) Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | TAX577579(Rovira) total RNA. (breast) | SRR189786 | SRR039621(GSM531984) HBV(+) HCC Tissue Sample 2. (liver) | SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin) | SRR330883(SRX091721) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR191469(GSM715579) 117genomic small RNA (size selected RNA from . (breast) | SRR444042(SRX128890) Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin) | SRR040019(GSM532904) G701T. (cervix) | SRR553575(SRX182781) source: Kidney. (Kidney) | SRR040037(GSM532922) G243T. (cervix) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR191426(GSM715536) 149genomic small RNA (size selected RNA from . (breast) | SRR191630(GSM715740) 70genomic small RNA (size selected RNA from t. (breast) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | GSM416733(GSM416733) HEK293. (cell line) | SRR189782 | TAX577740(Rovira) total RNA. (breast) | SRR037937(GSM510475) 293cand2. (cell line) | SRR037931(GSM510469) 293GFP. (cell line) | SRR191610(GSM715720) 195genomic small RNA (size selected RNA from . (breast) | SRR444069(SRX128917) Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin) | TAX577739(Rovira) total RNA. (breast) | SRR330884(SRX091722) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR040039(GSM532924) G531T. (cervix) | SRR040025(GSM532910) G613T. (cervix) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR191634(GSM715744) 98genomic small RNA (size selected RNA from t. (breast) | SRR343335 | SRR040032(GSM532917) G603N. (cervix) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | TAX577744(Rovira) total RNA. (breast) | TAX577589(Rovira) total RNA. (breast) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR191625(GSM715735) 32genomic small RNA (size selected RNA from t. (breast) | SRR191521(GSM715631) 92genomic small RNA (size selected RNA from t. (breast) | SRR191623(GSM715733) 18genomic small RNA (size selected RNA from t. (breast) | SRR033723(GSM497068) L1236 cell line (L1236). (B cell) | SRR040035(GSM532920) G001T. (cervix) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR444044(SRX128892) Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin) | SRR038852(GSM458535) QF1160MB. (cell line) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR330862(SRX091700) tissue: skin psoriatic involveddisease state:. (skin) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................TGATTGTAGATATTACC................................................................................................ | 17 | 115.00 | 0.00 | 115.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................TGATTGTAGATATTACCA............................................................................................... | 18 | 52.00 | 0.00 | 52.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................AAAGGGTGCTGTAGGCTT........................................................................................................................................................ | 18 | 32.00 | 0.00 | - | - | - | - | 3.00 | 1.00 | 1.00 | 3.00 | - | 4.00 | - | 3.00 | - | - | - | - | 2.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | 1.00 | - | 1.00 | 1.00 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | |
| ................................................................................AAAGGGTGCTGTAGGCTTT....................................................................................................................................................... | 19 | 17.00 | 0.00 | - | - | - | - | 1.00 | - | 1.00 | 1.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | 2.00 | - | - | - | - | - | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................TGATTGTAGATATTATTTTCCCAGAAGGCGCTGGGCTAACCCTGCTCTCTTCCCTTCGTGCAG.................................................. | 63 | 1 | 8.00 | 8.00 | - | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................GTAGATATTATTTTCCCAGAAGGCAA.................................................................................. | 26 | 5.00 | 0.00 | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................TTGGAACTCCTTGATTGTAGATATTATTTTCCCAGAAGGCGCTGGGCTAACCCTGCTCTCTTCCCTTCGTGCAGA................................................. | 75 | 1 | 3.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................TTGATTGTAGATATTCTG................................................................................................ | 18 | 3.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................AAAGGGTGCTGTAGGCTTA....................................................................................................................................................... | 19 | 3.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................ACAAACTCAACCAGAACTCCCAGC.......................... | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................AACCAGAACTCCCAGCTGAGCCACAGC............... | 27 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................TAAAGGGTGCTGTAGGCTT........................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................TGATTGTAGATATTAAAA............................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................CAGAACTCCCAGCTGAGCCA................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................AAAGGGTGCTGTAGGCTA........................................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ...........................................................................................................................................................................................................AACTCAACCAGAACTCCCAGCTGAGC..................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................TTTGAGTCTTTAAAGGGTG.................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................TAAAGGGTGCTGTAGGTAT........................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................TTGTAGATATTATTTTCCC........................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................AAAGGGTGCTGTAGGCT......................................................................................................................................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................AAAGGGTGCTGTAGGATTT....................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................CCCAGAAGGCGCTGGC.............................................................................. | 16 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................CTGCTCTCTTCCCTTCGTGCAG.................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................TCAACCAGAACTCCCAGCTGAGCC.................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................................TTGCTCTCCTGTGTCCCTTGTTCGAG............................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................TGATTGTAGATATTAGGC............................................................................................... | 18 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................TTGATTGTAGATATTGAC................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................CAAACTCAACCAGAACTCCCAGCTGAGC..................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TGACTGCTGGGCCGG........................................................................................................................................ | 15 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - |
| ............................................ACTGTTTGCTCTCCT............................................................................................................................................................................................... | 15 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |
| GAGTGGGGTCAGTCTTTAGCCTGTTTCTTTGGCCACGTTTCCCCACTGTTTGCTCTCCTGTGTCCCTTGTTTGAGTCTTTAAAGGGTGCTGTAGGGCCCTGACTGCTGGGCCGGATGGTCCTTTTTTTGGAACTCCTTGATTGTAGATATTATTTTCCCAGAAGGCGCTGGGCTAACCCTGCTCTCTTCCCTTCGTGCAGACAAACTCAACCAGAACTCCCAGCTGAGCCACAGTTATCAGGAGAGGAGT ...........................................................................(((..((((((..((((..(((((........)))))..))))..))))))..)))....................................................................................................................... ...........................................................................76................................................................................158.......................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR207110(GSM721072) Nuclear RNA. (cell line) | DRR001485(DRX001039) "Hela long total cell fraction, LNA(+)". (hela) | SRR189787 | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR444061(SRX128909) Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR037936(GSM510474) 293cand1. (cell line) | SRR037935(GSM510473) 293cand3. (cell line) | SRR444058(SRX128906) Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin) | SRR444052(SRX128900) Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin) | SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin) | DRR001486(DRX001040) "Hela long cytoplasmic cell fraction, LNA(+)". (hela) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR033712(GSM497057) Burkitt Lymphoma (BL510). (B cell) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR191629(GSM715739) 5genomic small RNA (size selected RNA from to. (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR444060(SRX128908) Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | TAX577579(Rovira) total RNA. (breast) | SRR189786 | SRR039621(GSM531984) HBV(+) HCC Tissue Sample 2. (liver) | SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin) | SRR330883(SRX091721) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR191469(GSM715579) 117genomic small RNA (size selected RNA from . (breast) | SRR444042(SRX128890) Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin) | SRR040019(GSM532904) G701T. (cervix) | SRR553575(SRX182781) source: Kidney. (Kidney) | SRR040037(GSM532922) G243T. (cervix) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR191426(GSM715536) 149genomic small RNA (size selected RNA from . (breast) | SRR191630(GSM715740) 70genomic small RNA (size selected RNA from t. (breast) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | GSM416733(GSM416733) HEK293. (cell line) | SRR189782 | TAX577740(Rovira) total RNA. (breast) | SRR037937(GSM510475) 293cand2. (cell line) | SRR037931(GSM510469) 293GFP. (cell line) | SRR191610(GSM715720) 195genomic small RNA (size selected RNA from . (breast) | SRR444069(SRX128917) Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin) | TAX577739(Rovira) total RNA. (breast) | SRR330884(SRX091722) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR040039(GSM532924) G531T. (cervix) | SRR040025(GSM532910) G613T. (cervix) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR191634(GSM715744) 98genomic small RNA (size selected RNA from t. (breast) | SRR343335 | SRR040032(GSM532917) G603N. (cervix) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | TAX577744(Rovira) total RNA. (breast) | TAX577589(Rovira) total RNA. (breast) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR191625(GSM715735) 32genomic small RNA (size selected RNA from t. (breast) | SRR191521(GSM715631) 92genomic small RNA (size selected RNA from t. (breast) | SRR191623(GSM715733) 18genomic small RNA (size selected RNA from t. (breast) | SRR033723(GSM497068) L1236 cell line (L1236). (B cell) | SRR040035(GSM532920) G001T. (cervix) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR444044(SRX128892) Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin) | SRR038852(GSM458535) QF1160MB. (cell line) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR330862(SRX091700) tissue: skin psoriatic involveddisease state:. (skin) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................GGTGCTGTAGGGCCCTGATTGT................................................................................................................................................ | 22 | 6.00 | 0.00 | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................TTGATTGTAGATATTCCT................................................................................................ | 18 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................TTGATTGTAGATATTCCC................................................................................................ | 18 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................................CTCCCAGCTGAGCCACAG................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .....................................................................................GTGCTGTAGGGCCCTGATTGT................................................................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........TCAGTCTTTAGCCTGAGA................................................................................................................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................GGTGCTGTAGGGCCCTGATTGC................................................................................................................................................ | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................................CTCCTGATAACTGTGG...... | 16 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................GTGCTGTAGGGCCCTGATTAA................................................................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................TTGATTGTAGATATTACA................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................AGGGTGCTGTAGGGCCCTGACG.................................................................................................................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................GGGTGCTGTAGGGCCCTGAGA.................................................................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........TCAGTCTTTAGCCTGAG................................................................................................................................................................................................................................. | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................ACGAAGGGAAGAGAGC...................................................... | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - |
| .........................................................................................................................................................................................CTGCACGAAGGGAAG.................................................. | 15 | 6 | 0.33 | 0.33 | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |